BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021429
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog ...   453   e-125
emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]   434   e-119
ref|XP_003553029.1| PREDICTED: 40S ribosomal protein S1-like [Gl...   416   e-114
ref|XP_003537529.1| PREDICTED: 30S ribosomal protein S1 homolog ...   416   e-114
ref|XP_002321102.1| predicted protein [Populus trichocarpa] gi|2...   415   e-113

>ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog [Vitis vinifera]
            gi|296089601|emb|CBI39420.3| unnamed protein product
            [Vitis vinifera]
          Length = 390

 Score =  453 bits (1166), Expect = e-125
 Identities = 240/368 (65%), Positives = 279/368 (75%), Gaps = 4/368 (1%)
 Frame = +2

Query: 131  SAAVGSVTNLSFLTT----NDVYSINHPLTFTTSSCLLRKTYLQQRLQCNTRVSVSGNIE 298
            S A GSVT LS L+     +   + N   +   +   +   Y +  L+ +     +  + 
Sbjct: 4    SGASGSVTGLSILSKLFCWDSSSNTNSSASLLINPSKISSFYRRSPLRRSPFHIATARVS 63

Query: 299  TEGQVDEQPQGVGIGEDAPETTDSSPQSRRYADWKAARAYKESGAIFEGRIESFNGGGLL 478
            TEG   EQ     +    P   D+  Q+RR ADWKAARA+ ESG I+EGRIE FNGGGLL
Sbjct: 64   TEGS--EQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLL 121

Query: 479  VRFYSLLGFLPYPLLSPSHSCKEPHKSIQEIGKDLAGSLISVKVVQASEENRKLIFSEKE 658
            VRFYSL+GFLP+P LSPSHSCKEPHK+IQEI K L GSLISVKV+ A EE RKLIFSEKE
Sbjct: 122  VRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKE 181

Query: 659  AVWSKFYGKIKIGDIFSARVGTLEDYGAFVHLRFPDGYYHVTGLVHISEVSWDLVQDVRD 838
            A W KF  +I IGDIF A VG++EDYGAFVHLRFPDG YH+TGLVH+SEVSWDLVQDVRD
Sbjct: 182  AAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRD 241

Query: 839  VLNEGDEVRVKVIQLDRGKSRVTLSIKQLEDDPLLETLDKVIPEDGQFGTNTSSDPDSLI 1018
            VLNEGDEVRVK++++DR KSR+TLSIKQLE+DPLLETLDKVIP+DG  G ++    DS  
Sbjct: 242  VLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQDGSTGPDSLRTSDSYD 301

Query: 1019 IEPLPGLESICKELLQENGVTDVRINRQGFEKRVVSQDLQLWLSNEQAVGNQFTLLARAG 1198
            IEPLPGLE+I +ELLQE G++DVRI+RQGFEKRVVSQDLQLWLSN  AV  QFTLLARAG
Sbjct: 302  IEPLPGLETIFEELLQEEGISDVRISRQGFEKRVVSQDLQLWLSNAPAVDKQFTLLARAG 361

Query: 1199 RQVQEIQL 1222
            RQVQEIQL
Sbjct: 362  RQVQEIQL 369


>emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]
          Length = 418

 Score =  434 bits (1116), Expect = e-119
 Identities = 240/396 (60%), Positives = 279/396 (70%), Gaps = 32/396 (8%)
 Frame = +2

Query: 131  SAAVGSVTNLSFLTT----NDVYSINHPLTFTTSSCLLRKTYLQQRLQCNTRVSVSGNIE 298
            S A GSVT LS L+     +   + N   +   +   +   Y +  L+ +     +  + 
Sbjct: 4    SGASGSVTGLSILSKLFCWDSSSNTNSSASLLINPSKISSFYRRSPLRRSPFHIATARVS 63

Query: 299  TEGQVDEQPQGVGIGEDAPETTDSSPQSRRYADWKAARAYKESGAIFEGRIESFNGGGLL 478
            TEG   EQ     +    P   D+  Q+RR ADWKAARA+ ESG I+EGRIE FNGGGLL
Sbjct: 64   TEGS--EQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLL 121

Query: 479  VRFYSLLGFLPYPLLSPSHSCKEPHKSIQEIGKDLAGSLISVKVVQASEENRKLIFSEKE 658
            VRFYSL+GFLP+P LSPSHSCKEPHK+IQEI K L GSLISVKV+ A EE RKLIFSEKE
Sbjct: 122  VRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKE 181

Query: 659  AVWSKFYGKIKIGDIFSARVGTLEDYGAFVHLRFPD----------GYYHVTGLVHISEV 808
            A W KF  +I IGDIF A VG++EDYGAFVHLRFPD          G YH+TGLVH+SEV
Sbjct: 182  AAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGTSFSVTYITGLYHLTGLVHVSEV 241

Query: 809  SWDLVQDVRDVLNEGDEVRVKVIQLDRGKSRVTLSIKQLEDDPLLETLDKVIP------- 967
            SWDLVQDVRDVLNEGDEVRVK++++DR KSR+TLSIKQLE+DPLLETLDKVIP       
Sbjct: 242  SWDLVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQIIFLLH 301

Query: 968  -----------EDGQFGTNTSSDPDSLIIEPLPGLESICKELLQENGVTDVRINRQGFEK 1114
                       +DG  G ++    DS  IEPLPGLE+I +ELLQE G++DVRI+RQGFEK
Sbjct: 302  RTKSSDVSHLLQDGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQGFEK 361

Query: 1115 RVVSQDLQLWLSNEQAVGNQFTLLARAGRQVQEIQL 1222
            RVVSQDLQLWLSN  AV  QFTLLARAGRQVQEIQL
Sbjct: 362  RVVSQDLQLWLSNAPAVDKQFTLLARAGRQVQEIQL 397


>ref|XP_003553029.1| PREDICTED: 40S ribosomal protein S1-like [Glycine max]
          Length = 378

 Score =  416 bits (1070), Expect = e-114
 Identities = 215/365 (58%), Positives = 270/365 (73%), Gaps = 1/365 (0%)
 Frame = +2

Query: 131  SAAVGSVTNLSFLTTNDVYSINHPLTFTTSSCLLRKTYLQQRLQCNTRVSVSGNIETEGQ 310
            SA +GS T++S    +   S +H   F  + C  +  Y   ++     VS SGN     Q
Sbjct: 5    SATLGSFTSIS----SSFLSQSHLSPFVKTPCQWQHHYHTAKVL----VSASGNT----Q 52

Query: 311  VDEQPQ-GVGIGEDAPETTDSSPQSRRYADWKAARAYKESGAIFEGRIESFNGGGLLVRF 487
            +D+ P  G+      P+  D + Q+RR +DWKAA+ Y++S  I+ GR+E FN GGLLVRF
Sbjct: 53   IDQNPDSGLLQRPTPPDPLDDARQARRSSDWKAAKTYQDSKVIYNGRVEGFNSGGLLVRF 112

Query: 488  YSLLGFLPYPLLSPSHSCKEPHKSIQEIGKDLAGSLISVKVVQASEENRKLIFSEKEAVW 667
            YS++GFLP+P LSP H+ KEP KSIQEI + L GS++SVKV+ A E+N+KLIFSEKEA W
Sbjct: 113  YSVMGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAW 172

Query: 668  SKFYGKIKIGDIFSARVGTLEDYGAFVHLRFPDGYYHVTGLVHISEVSWDLVQDVRDVLN 847
            SK+  ++ +GDIF  RVG +EDYGAFVHLRFPDG YH+TGL+H+SEVSWDL+QDVRD+L 
Sbjct: 173  SKYSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYHLTGLIHVSEVSWDLIQDVRDILK 232

Query: 848  EGDEVRVKVIQLDRGKSRVTLSIKQLEDDPLLETLDKVIPEDGQFGTNTSSDPDSLIIEP 1027
             GDEVR KV+ +D GKSR+ LSI+QLE+DPLLETLDKVIP+DG    ++ S  DS  IEP
Sbjct: 233  VGDEVRAKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSMSGGDSGSIEP 292

Query: 1028 LPGLESICKELLQENGVTDVRINRQGFEKRVVSQDLQLWLSNEQAVGNQFTLLARAGRQV 1207
            LPGLE+I +ELLQE+G+ DVRI+RQGFEKRVVSQDLQLWLSN      +FTLLARAGRQV
Sbjct: 293  LPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQV 352

Query: 1208 QEIQL 1222
            QEI L
Sbjct: 353  QEIHL 357


>ref|XP_003537529.1| PREDICTED: 30S ribosomal protein S1 homolog [Glycine max]
          Length = 383

 Score =  416 bits (1068), Expect = e-114
 Identities = 214/365 (58%), Positives = 269/365 (73%), Gaps = 1/365 (0%)
 Frame = +2

Query: 131  SAAVGSVTNLSFLTTNDVYSINHPLTFTTSSCLLRKTYLQQRLQCNTRVSVSGNIETEG- 307
            SA++GS T++SFL+T+   S +H   F  +     +      L     VS SGN +    
Sbjct: 5    SASLGSFTSISFLSTSQSQSQSHLSPFKLTVKTPWQWQHHHYLTSKVLVSASGNTQIPNT 64

Query: 308  QVDEQPQGVGIGEDAPETTDSSPQSRRYADWKAARAYKESGAIFEGRIESFNGGGLLVRF 487
            ++ ++P         P+  D   Q+RR +DWKAA+ Y++S  I+ GR+E FN GGLLVRF
Sbjct: 65   ELLQRPT-------PPDPLDDVRQARRSSDWKAAKTYQDSKLIYNGRVEGFNSGGLLVRF 117

Query: 488  YSLLGFLPYPLLSPSHSCKEPHKSIQEIGKDLAGSLISVKVVQASEENRKLIFSEKEAVW 667
            YS++GFLP+P LSP H+ KEP KSIQEI + L GS++SVKV+ A E+N+KLIFSEKEA W
Sbjct: 118  YSIMGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAW 177

Query: 668  SKFYGKIKIGDIFSARVGTLEDYGAFVHLRFPDGYYHVTGLVHISEVSWDLVQDVRDVLN 847
            SKF  ++ +GDIF  RVG +EDYGAFVHLRFPDG Y +TGL+H+SEVSWDL+QDVRD+L 
Sbjct: 178  SKFSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYRLTGLIHVSEVSWDLIQDVRDILK 237

Query: 848  EGDEVRVKVIQLDRGKSRVTLSIKQLEDDPLLETLDKVIPEDGQFGTNTSSDPDSLIIEP 1027
             GDEVRVKV+ +D GKSR+ LSI+QLE+DPLLETLDKVIP+DG    ++ S  DS  IEP
Sbjct: 238  VGDEVRVKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSMSGGDSGSIEP 297

Query: 1028 LPGLESICKELLQENGVTDVRINRQGFEKRVVSQDLQLWLSNEQAVGNQFTLLARAGRQV 1207
            LPGLE+I +ELLQE+G+ DVRI+RQGFEKRVVSQDLQLWL N      +FTLLARAGRQV
Sbjct: 298  LPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLCNAPPTNQRFTLLARAGRQV 357

Query: 1208 QEIQL 1222
            QEI L
Sbjct: 358  QEIHL 362


>ref|XP_002321102.1| predicted protein [Populus trichocarpa] gi|222861875|gb|EEE99417.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  415 bits (1067), Expect = e-113
 Identities = 201/278 (72%), Positives = 238/278 (85%), Gaps = 1/278 (0%)
 Frame = +2

Query: 392  ADWKAARAYKESGAIFEGRIESFNGGGLLVRFYSLLGFLPYPLLSPSHSCKEPHKSIQEI 571
            ADWKA +AY + G I +GR+E FNGGGL+VRFYSL+GFLP+PLLSPSHSCK+P K+I EI
Sbjct: 1    ADWKAVKAYYDGGHILQGRVEGFNGGGLIVRFYSLVGFLPFPLLSPSHSCKDPQKTIHEI 60

Query: 572  GKDLAGSLISVKVVQASEENRKLIFSEKEAVWSKFYGKIKIGDIFSARVGTLEDYGAFVH 751
             KDL G LISVKV+ A EENRKLIFSEKEAVWSKF   I +G+IF+ RVG++EDYGAF+H
Sbjct: 61   AKDLTGLLISVKVIHAEEENRKLIFSEKEAVWSKFSKGINVGEIFAGRVGSVEDYGAFIH 120

Query: 752  LRFPDG-YYHVTGLVHISEVSWDLVQDVRDVLNEGDEVRVKVIQLDRGKSRVTLSIKQLE 928
            +RFPDG  YH+TGLVH+SEVSWDLVQDVRD+LN GDEV VK+I +D+GKSR+TLSIKQLE
Sbjct: 121  MRFPDGSLYHLTGLVHVSEVSWDLVQDVRDILNVGDEVTVKIIDIDQGKSRITLSIKQLE 180

Query: 929  DDPLLETLDKVIPEDGQFGTNTSSDPDSLIIEPLPGLESICKELLQENGVTDVRINRQGF 1108
            +DPLLETLDKVIP+DG    +  S  +S+ IEPLPGLESI +EL +E+G+ D+RI+RQGF
Sbjct: 181  EDPLLETLDKVIPQDGSIAPDPLSMHNSITIEPLPGLESIFQELTREDGIDDIRISRQGF 240

Query: 1109 EKRVVSQDLQLWLSNEQAVGNQFTLLARAGRQVQEIQL 1222
            EKRVVSQDLQLWLSN   +  +FTLLARAGRQVQEIQL
Sbjct: 241  EKRVVSQDLQLWLSNAPPINRKFTLLARAGRQVQEIQL 278