BLASTX nr result

ID: Coptis23_contig00021416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021416
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889261.1| kinase [Arabidopsis lyrata subsp. lyrata] gi...   125   3e-27
gb|AAF68124.1|AC010793_19 F20B17.7 [Arabidopsis thaliana]             123   1e-26
gb|AFW64178.1| putative protein kinase superfamily protein [Zea ...   123   1e-26
gb|AFW64177.1| putative protein kinase superfamily protein [Zea ...   123   1e-26
ref|NP_001185438.1| protein kinase domain-containing protein [Ar...   123   1e-26

>ref|XP_002889261.1| kinase [Arabidopsis lyrata subsp. lyrata]
           gi|297335102|gb|EFH65520.1| kinase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 678

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/114 (52%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
 Frame = +2

Query: 5   YYELLDVIGKGGCASVYRACCLPLGEVVAIKVVNLEEED-DFKLITKEAQTMKLVRHPNL 181
           +Y L +VIG+G  A V+RA C+P  EVVAIK+++ E ++ D   I++EAQTM LV HPN+
Sbjct: 12  HYSLYEVIGQGVSALVHRALCIPFDEVVAIKILDFERDNCDLNNISREAQTMMLVDHPNV 71

Query: 182 VSAYCSFIKESELWVVMPLMDAGSCYHVMKSTYPGGIQEEAVIAKFLYEALKGL 343
           + ++CSF+ +  LWV+MP M  GSC H++K+ YP G  EEA+IA  L EALKGL
Sbjct: 72  LKSHCSFVSDHNLWVIMPYMSGGSCLHILKAAYPDGF-EEAIIATILREALKGL 124


>gb|AAF68124.1|AC010793_19 F20B17.7 [Arabidopsis thaliana]
          Length = 547

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/114 (51%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = +2

Query: 5   YYELLDVIGKGGCASVYRACCLPLGEVVAIKVVNLEEED-DFKLITKEAQTMKLVRHPNL 181
           +Y L + IG+G  A V+RA C+P  EVVAIK+++ E ++ D   I++EAQTM LV HPN+
Sbjct: 12  HYTLYEFIGQGVSALVHRALCIPFDEVVAIKILDFERDNCDLNNISREAQTMMLVDHPNV 71

Query: 182 VSAYCSFIKESELWVVMPLMDAGSCYHVMKSTYPGGIQEEAVIAKFLYEALKGL 343
           + ++CSF+ +  LWV+MP M  GSC H++K+ YP G  EEA+IA  L EALKGL
Sbjct: 72  LKSHCSFVSDHNLWVIMPYMSGGSCLHILKAAYPDGF-EEAIIATILREALKGL 124


>gb|AFW64178.1| putative protein kinase superfamily protein [Zea mays]
          Length = 690

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/113 (56%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = +2

Query: 8   YELLDVIGKGGCASVYRACCLPLGEVVAIKVVNLEEED-DFKLITKEAQTMKLVRHPNLV 184
           YEL + IG+G  A VYRA C PL E+VA+KVV+ E  + D   I +EAQTM L+ HPN+V
Sbjct: 27  YELYEEIGQGVSAIVYRALCKPLDEIVAVKVVDFERTNSDLNNIVREAQTMILIDHPNVV 86

Query: 185 SAYCSFIKESELWVVMPLMDAGSCYHVMKSTYPGGIQEEAVIAKFLYEALKGL 343
            A+CSF K+  LWVVMP M  GSC H+MKS +P G  EE +IA  L E LKGL
Sbjct: 87  KAHCSFAKDQTLWVVMPYMAGGSCLHIMKSVHPTGF-EEPIIATILREVLKGL 138


>gb|AFW64177.1| putative protein kinase superfamily protein [Zea mays]
          Length = 650

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/113 (56%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = +2

Query: 8   YELLDVIGKGGCASVYRACCLPLGEVVAIKVVNLEEED-DFKLITKEAQTMKLVRHPNLV 184
           YEL + IG+G  A VYRA C PL E+VA+KVV+ E  + D   I +EAQTM L+ HPN+V
Sbjct: 27  YELYEEIGQGVSAIVYRALCKPLDEIVAVKVVDFERTNSDLNNIVREAQTMILIDHPNVV 86

Query: 185 SAYCSFIKESELWVVMPLMDAGSCYHVMKSTYPGGIQEEAVIAKFLYEALKGL 343
            A+CSF K+  LWVVMP M  GSC H+MKS +P G  EE +IA  L E LKGL
Sbjct: 87  KAHCSFAKDQTLWVVMPYMAGGSCLHIMKSVHPTGF-EEPIIATILREVLKGL 138


>ref|NP_001185438.1| protein kinase domain-containing protein [Arabidopsis thaliana]
           gi|332198157|gb|AEE36278.1| protein kinase
           domain-containing protein [Arabidopsis thaliana]
          Length = 680

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/114 (51%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = +2

Query: 5   YYELLDVIGKGGCASVYRACCLPLGEVVAIKVVNLEEED-DFKLITKEAQTMKLVRHPNL 181
           +Y L + IG+G  A V+RA C+P  EVVAIK+++ E ++ D   I++EAQTM LV HPN+
Sbjct: 12  HYTLYEFIGQGVSALVHRALCIPFDEVVAIKILDFERDNCDLNNISREAQTMMLVDHPNV 71

Query: 182 VSAYCSFIKESELWVVMPLMDAGSCYHVMKSTYPGGIQEEAVIAKFLYEALKGL 343
           + ++CSF+ +  LWV+MP M  GSC H++K+ YP G  EEA+IA  L EALKGL
Sbjct: 72  LKSHCSFVSDHNLWVIMPYMSGGSCLHILKAAYPDGF-EEAIIATILREALKGL 124


Top