BLASTX nr result

ID: Coptis23_contig00021413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021413
         (1516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               72   3e-10
ref|XP_002304853.1| predicted protein [Populus trichocarpa] gi|2...    66   8e-10
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    65   5e-08
ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781...    51   1e-06
emb|CBI16537.3| unnamed protein product [Vitis vinifera]               60   2e-06

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 4/294 (1%)
 Frame = -2

Query: 1488 VDEWVNSVLSRNVQEVSLEAMDIKYST-LKTLASEVKSLKLKRVCFVGIDSEKLLLSSEV 1312
            V+ W+ + L RNVQE+ L   D +Y   L       K+L + ++C              V
Sbjct: 107  VNSWICTALERNVQELDLY-FDTEYPIELPPKFFFCKTLVVLKLC-------------PV 152

Query: 1311 METLVICKLYLGK--TLSISMPSVKHLLFNFGGESGCEPVHAEVHAPNLTLLQIKGCICK 1138
            +E LVI +  L +    ++S P++K L   F            V APNL  L I   + +
Sbjct: 153  LEELVIERWRLDEQWVFNVSAPTLKSLAIYFS------KYKLVVDAPNLEYLSITDFVSE 206

Query: 1137 GFSLENLSSIVTAEIDHDYCWWRVKDQEKLENLAWCLTNILKGLPNVKSLTLPANIFQAF 958
             + + NLSS+V A ++       + DQ       +    +L+G+ NVK L+L      + 
Sbjct: 207  DYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIY---ELLRGISNVKHLSLSGETLHSL 263

Query: 957  TNLPNWSKEVLHKYHNLRYLKLRCWSCKSPANILGLVELVVNIPHVETLVMEREEQVFIS 778
            + +  +    L  +H++  L+L          +  L E +   P++E L++E   +    
Sbjct: 264  SGM--FCGYELPAFHSVTRLELEV---DYGYGLEFLKEFLDTSPNLEILILENVNK---D 315

Query: 777  NAEDIDWKEQLSLQ-CVFPHLKSIEMRYLEGCEQELWFLELLVKNAIVLDNITI 619
              E  +W   L +  CV  HL  +E++  +G + EL  +E L+KNA VL  ++I
Sbjct: 316  ECEIEEWTLPLQVPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSI 369


>ref|XP_002304853.1| predicted protein [Populus trichocarpa] gi|222842285|gb|EEE79832.1|
           predicted protein [Populus trichocarpa]
          Length = 1538

 Score = 65.9 bits (159), Expect(2) = 8e-10
 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
 Frame = -1

Query: 409 SKHQRTGTTS-FGDSG------MATYTNIEVNISSTAGASNDQVGSHWDWYDEIQWKLIY 251
           SK  RTG    +G  G      M  + ++EVN S+  G +N+Q+GS WDW D+    +  
Sbjct: 35  SKRPRTGMNEPYGQVGTVKNAPMQEFGSVEVNASAITGIANEQIGSRWDWDDDRGAGMDI 94

Query: 250 EKLRS---DFGDFFESDSLPFGELP 185
           + L S   DFGDFFE+D LPFGE P
Sbjct: 95  QALLSEFGDFGDFFENDDLPFGEPP 119



 Score = 25.0 bits (53), Expect(2) = 8e-10
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 90  MLLPVFDFPSFDSLNPLP 37
           MLLP   FPSF+S NP P
Sbjct: 151 MLLPAA-FPSFESFNPSP 167


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 20/276 (7%)
 Frame = -2

Query: 1386 VKSLKLKRVCFVGIDS-EKLLLSSEVMETLVICKLYLGK--TLSISMPSVKHLLFNFGGE 1216
            +K+L LK V +   DS +KLL    V+E LVI +        +++S PS+K L   F  +
Sbjct: 165  LKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTD 224

Query: 1215 SGCEPVHAE-------VHAPNLTLLQIKGCICKGFSLENLSSIVTAEIDHDYCWWRVKDQ 1057
                P   E       V APNL  L I   + K + +++L S+V A ID +      +D 
Sbjct: 225  GFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVE------QDS 278

Query: 1056 EKLE--------NLAWCLTNILKGLPNVKSLTLPANIFQAFTN-LPNWSKEVLHKYHNLR 904
            E+ E        +    +  +L  + NVK L+L      + +  + ++     H    L 
Sbjct: 279  EEFEESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLE 338

Query: 903  YLKLRCWSCKSPANILGLVELVVNIPHVETLVMEREEQVFISNAEDIDWKEQLSLQ-CVF 727
            +L +  ++     N L       + P++E LV+E     + +      W   L +  C+ 
Sbjct: 339  FLFIGGFNWDFLPNFLH------SSPNLEALVIETG---YTNELIPEGWLMPLQVPACLV 389

Query: 726  PHLKSIEMRYLEGCEQELWFLELLVKNAIVLDNITI 619
             HLK IE+R + G + EL  +E L+KNA VL  +TI
Sbjct: 390  LHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTI 425


>ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781873 [Glycine max]
          Length = 1918

 Score = 50.8 bits (120), Expect(3) = 1e-06
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
 Frame = -1

Query: 319 GASNDQVGSHWDWYDEIQ-WKLIYEKLRS---DFGDFFESDSLPFGELP 185
           G  ND +GS+WDW D+ +  ++  + L S   DFGDFFE+D LPFGE P
Sbjct: 471 GVGNDPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPP 519



 Score = 25.0 bits (53), Expect(3) = 1e-06
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -2

Query: 90  MLLPVFDFPSFDSLNPLP 37
           +LLPV  FPSF+S NP P
Sbjct: 551 ILLPV-GFPSFESFNPPP 567



 Score = 23.5 bits (49), Expect(3) = 1e-06
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 155 DCGDVNGSPFTGTMVVMDRMLL 90
           DCGDVN SP  G + V  ++LL
Sbjct: 533 DCGDVNSSP-GGVIDVPGQILL 553


>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
          Length = 1812

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 16/91 (17%)
 Frame = -1

Query: 409 SKHQRTGTT-SFGDSGMAT-----------YTNIEVNISSTAGASNDQVGSHWDWYDEIQ 266
           SK  RTG + SFG  G              Y ++EVN S+  G +++Q+ SHWDW D+ +
Sbjct: 455 SKRPRTGISESFGQVGTVNNAPMQDAYRSGYGSVEVNNSAITGVASEQI-SHWDWDDDDR 513

Query: 265 WKLI-YEKLRS---DFGDFFESDSLPFGELP 185
             ++  + L S   DFGDFFE+D+LPFGE P
Sbjct: 514 GAVMDIQALLSEFGDFGDFFENDALPFGEPP 544


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