BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021397
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    74   2e-18
ref|XP_002530492.1| cell cycle control protein cwf22, putative [...    70   2e-17
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    70   2e-17
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...    70   2e-17
gb|EEE53027.1| hypothetical protein OsJ_35744 [Oryza sativa Japo...    69   6e-17

>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score = 73.6 bits (179), Expect(2) = 2e-18
 Identities = 38/58 (65%), Positives = 41/58 (70%)
 Frame = +1

Query: 88  VFAALVSVVNTKFPKXXXXXXXXXXXXXQGAYKRNDKHQLLAATLFITHLVNQQVAHE 261
           VFAALV+VVNTKFP+             + AYKRNDKHQLLAA  FI HLVNQQVAHE
Sbjct: 289 VFAALVAVVNTKFPEVGELLMRRIVLQFKRAYKRNDKHQLLAAVKFIAHLVNQQVAHE 346



 Score = 43.5 bits (101), Expect(2) = 2e-18
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +2

Query: 2   EFFQENLIRGRGLFCRYIIKSQFASP 79
           E F ENLIRGRGLFCR  +KSQ ASP
Sbjct: 259 ELFGENLIRGRGLFCRSCMKSQMASP 284


>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
           gi|223529949|gb|EEF31876.1| cell cycle control protein
           cwf22, putative [Ricinus communis]
          Length = 810

 Score = 69.7 bits (169), Expect(2) = 2e-17
 Identities = 37/58 (63%), Positives = 40/58 (68%)
 Frame = +1

Query: 88  VFAALVSVVNTKFPKXXXXXXXXXXXXXQGAYKRNDKHQLLAATLFITHLVNQQVAHE 261
           VFAALV+VVNTKFP+             + AYKRNDK QLLAA  FI HLVNQQVAHE
Sbjct: 286 VFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE 343



 Score = 44.3 bits (103), Expect(2) = 2e-17
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +2

Query: 2   EFFQENLIRGRGLFCRYIIKSQFASP 79
           E F ENLIRGRGLFCR  +KSQ ASP
Sbjct: 256 ELFSENLIRGRGLFCRSCMKSQMASP 281


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score = 69.7 bits (169), Expect(2) = 2e-17
 Identities = 37/58 (63%), Positives = 40/58 (68%)
 Frame = +1

Query: 88  VFAALVSVVNTKFPKXXXXXXXXXXXXXQGAYKRNDKHQLLAATLFITHLVNQQVAHE 261
           VFAALV+VVNTKFP+             + AYKRNDK QLLAA  FI HLVNQQVAHE
Sbjct: 306 VFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE 363



 Score = 43.9 bits (102), Expect(2) = 2e-17
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +2

Query: 2   EFFQENLIRGRGLFCRYIIKSQFASP 79
           E F ENLIRGRGLFCR  +KSQ ASP
Sbjct: 276 ELFAENLIRGRGLFCRSCMKSQMASP 301


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score = 69.7 bits (169), Expect(2) = 2e-17
 Identities = 37/58 (63%), Positives = 40/58 (68%)
 Frame = +1

Query: 88  VFAALVSVVNTKFPKXXXXXXXXXXXXXQGAYKRNDKHQLLAATLFITHLVNQQVAHE 261
           VFAALV+VVNTKFP+             + AYKRNDK QLLAA  FI HLVNQQVAHE
Sbjct: 306 VFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE 363



 Score = 43.9 bits (102), Expect(2) = 2e-17
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +2

Query: 2   EFFQENLIRGRGLFCRYIIKSQFASP 79
           E F ENLIRGRGLFCR  +KSQ ASP
Sbjct: 276 ELFAENLIRGRGLFCRSCMKSQMASP 301


>gb|EEE53027.1| hypothetical protein OsJ_35744 [Oryza sativa Japonica Group]
          Length = 1003

 Score = 68.9 bits (167), Expect(2) = 6e-17
 Identities = 37/58 (63%), Positives = 40/58 (68%)
 Frame = +1

Query: 88  VFAALVSVVNTKFPKXXXXXXXXXXXXXQGAYKRNDKHQLLAATLFITHLVNQQVAHE 261
           VFAALV+VVNTKFP+             + AYKRNDK QLLAAT FI HLVNQ VAHE
Sbjct: 307 VFAALVAVVNTKFPEIGRLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQVVAHE 364



 Score = 43.1 bits (100), Expect(2) = 6e-17
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 2   EFFQENLIRGRGLFCRYIIKSQFASP 79
           E F ENL+RGRGLFC+  IKSQ ASP
Sbjct: 277 ELFAENLVRGRGLFCQSCIKSQMASP 302