BLASTX nr result

ID: Coptis23_contig00021390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021390
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306469.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_003537310.1| PREDICTED: uncharacterized protein LOC100776...    57   1e-06
ref|XP_003517299.1| PREDICTED: uncharacterized protein LOC100793...    57   1e-06
ref|XP_002523586.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_002282505.1| PREDICTED: uncharacterized protein LOC100262...    56   4e-06

>ref|XP_002306469.1| predicted protein [Populus trichocarpa] gi|222855918|gb|EEE93465.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/62 (53%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
 Frame = +2

Query: 38  MVDVDRRMTGFSPAHVXXXXXXXXXXXXXXXX--IPVRNSLLSFTSLAQTVINHLRNSNI 211
           MVDVDRRMTG +PAH+                  +P RNSLLSF+SLA  VI HLRNS I
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPSTTTTLPARNSLLSFSSLADKVITHLRNSGI 60

Query: 212 TV 217
            V
Sbjct: 61  QV 62


>ref|XP_003537310.1| PREDICTED: uncharacterized protein LOC100776346 [Glycine max]
          Length = 412

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/60 (51%), Positives = 37/60 (61%)
 Frame = +2

Query: 38  MVDVDRRMTGFSPAHVXXXXXXXXXXXXXXXXIPVRNSLLSFTSLAQTVINHLRNSNITV 217
           MVDVDRRMTG +PAH+                +PVRN ++SF SLA  VINHLR+S I V
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAAPS-VPVRNGVVSFASLADKVINHLRDSGIHV 59


>ref|XP_003517299.1| PREDICTED: uncharacterized protein LOC100793662 [Glycine max]
          Length = 406

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/60 (51%), Positives = 37/60 (61%)
 Frame = +2

Query: 38  MVDVDRRMTGFSPAHVXXXXXXXXXXXXXXXXIPVRNSLLSFTSLAQTVINHLRNSNITV 217
           MVDVDRRMTG +PAH+                +PVRN ++SF SLA  VINHLR+S I V
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARASAAPS-VPVRNGVVSFASLADKVINHLRDSGIHV 59


>ref|XP_002523586.1| conserved hypothetical protein [Ricinus communis]
           gi|223537148|gb|EEF38781.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 398

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/60 (53%), Positives = 36/60 (60%)
 Frame = +2

Query: 38  MVDVDRRMTGFSPAHVXXXXXXXXXXXXXXXXIPVRNSLLSFTSLAQTVINHLRNSNITV 217
           MVDVDRRMTG +PAH+                 PVRN L+SF+SLA  VI HLRNS I V
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPSTA-PVRNGLVSFSSLADKVITHLRNSAIQV 59


>ref|XP_002282505.1| PREDICTED: uncharacterized protein LOC100262755 [Vitis vinifera]
          Length = 397

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/63 (49%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
 Frame = +2

Query: 38  MVDVDRRMTGFSPAHVXXXXXXXXXXXXXXXX---IPVRNSLLSFTSLAQTVINHLRNSN 208
           MVDVDRRMTG +PAH+                   +PVRN L+SFT+LA  VI HL+NS 
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAAAPSTVSTALPVRNGLISFTTLADKVIAHLQNSG 60

Query: 209 ITV 217
           I V
Sbjct: 61  IQV 63


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