BLASTX nr result

ID: Coptis23_contig00021371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021371
         (1666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-contai...   150   1e-33
emb|CBI34361.3| unnamed protein product [Vitis vinifera]              150   1e-33
emb|CAN79179.1| hypothetical protein VITISV_016730 [Vitis vinifera]   150   1e-33
ref|XP_002302593.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-33
ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-32

>ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-containing protein 2-like
            [Vitis vinifera]
          Length = 601

 Score =  150 bits (379), Expect = 1e-33
 Identities = 71/181 (39%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
 Frame = +2

Query: 863  DFMSDYIPRMAIPVGPRFQADIPDCIGIASRASLSDGNANVNSSDKRLGTLVWPIEDRDA 1042
            D   D +    IPVGP FQA++P+  G  +            S  K LGT VWP+E+ + 
Sbjct: 386  DLFPDDLFLKPIPVGPNFQAEVPEWTGEVTE-----------SDSKWLGTQVWPLENGEC 434

Query: 1043 EFSGE--LIGKGRPSTCLCQSPGSPECIKLHVNDERVRLKFDISSAFYSWKFDEMGEEVS 1216
             F  E   +G+G+P +C C+  GS EC++ H+ ++R++LK D+ S FY W+FD MGEE+S
Sbjct: 435  SFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEIS 494

Query: 1217 KSWTPAEERCFRIVVKMNPVSSDMSFLNPALKCLPSKSRESILSYYYNVFVLNRMSRQTR 1396
             +WT  EE+ F+ ++++N      SF + AL+  P+K+RE+++SYY+NVF++ R   Q R
Sbjct: 495  LAWTTEEEKRFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 554

Query: 1397 L 1399
            +
Sbjct: 555  V 555


>emb|CBI34361.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  150 bits (379), Expect = 1e-33
 Identities = 71/181 (39%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
 Frame = +2

Query: 863  DFMSDYIPRMAIPVGPRFQADIPDCIGIASRASLSDGNANVNSSDKRLGTLVWPIEDRDA 1042
            D   D +    IPVGP FQA++P+  G  +            S  K LGT VWP+E+ + 
Sbjct: 317  DLFPDDLFLKPIPVGPNFQAEVPEWTGEVTE-----------SDSKWLGTQVWPLENGEC 365

Query: 1043 EFSGE--LIGKGRPSTCLCQSPGSPECIKLHVNDERVRLKFDISSAFYSWKFDEMGEEVS 1216
             F  E   +G+G+P +C C+  GS EC++ H+ ++R++LK D+ S FY W+FD MGEE+S
Sbjct: 366  SFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEIS 425

Query: 1217 KSWTPAEERCFRIVVKMNPVSSDMSFLNPALKCLPSKSRESILSYYYNVFVLNRMSRQTR 1396
             +WT  EE+ F+ ++++N      SF + AL+  P+K+RE+++SYY+NVF++ R   Q R
Sbjct: 426  LAWTTEEEKRFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 485

Query: 1397 L 1399
            +
Sbjct: 486  V 486


>emb|CAN79179.1| hypothetical protein VITISV_016730 [Vitis vinifera]
          Length = 242

 Score =  150 bits (379), Expect = 1e-33
 Identities = 79/188 (42%), Positives = 116/188 (61%), Gaps = 2/188 (1%)
 Frame = +2

Query: 839  PQRVVKSFDFMSDYIPRMAIPVGPRFQADIPDCIGIASRASLSDGNANVNSSDKRLGTLV 1018
            P++      F++D   ++AIP+G  FQA++P+ IG+ ++    D + + + + + LGT  
Sbjct: 10   PKKEADRVKFLTDSA-QLAIPIGSLFQAEVPEWIGVPNKHHPCDKD-DASDTSRWLGTKS 67

Query: 1019 WPIEDRDAEFS-GELIGKGRPSTCLCQSPGSPECIKLHVNDERVRLKFDISSAFYSWKFD 1195
            WPIE      S  + IG GRP +C C SPGS +C+K H+ ++   L+ D+  AF  W F 
Sbjct: 68   WPIEGSSITNSDADKIGNGRPDSCSCTSPGSAKCVKFHIQEKSAELQQDLGPAFRDWNFH 127

Query: 1196 EMGEE-VSKSWTPAEERCFRIVVKMNPVSSDMSFLNPALKCLPSKSRESILSYYYNVFVL 1372
             MGEE V +SWT  E+R F  +VK +P S   SFL PA++  PSKSR+ I+SYY NVFV 
Sbjct: 128  TMGEEAVLRSWTAKEQRKFETLVKGHPPSQHKSFLKPAIEXFPSKSRKDIVSYYCNVFVP 187

Query: 1373 NRMSRQTR 1396
             R+S+ TR
Sbjct: 188  RRISKLTR 195


>ref|XP_002302593.1| predicted protein [Populus trichocarpa] gi|222844319|gb|EEE81866.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  148 bits (373), Expect = 5e-33
 Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 2/169 (1%)
 Frame = +2

Query: 896  IPVGPRFQADIPDCIGIASRASLSDGNANVNSSDKRLGTLVWPIEDRDAEF--SGELIGK 1069
            IPVGP FQA++P+  G+ S+           S  K LGT VWP++    +F    E IGK
Sbjct: 73   IPVGPVFQAEVPEWTGVVSK-----------SDSKWLGTQVWPLKTSINKFVIEREPIGK 121

Query: 1070 GRPSTCLCQSPGSPECIKLHVNDERVRLKFDISSAFYSWKFDEMGEEVSKSWTPAEERCF 1249
            GR  +C CQ P S EC++ H+ + R+R+  +++ AF  W+FD MGEEV  SWT  E++ F
Sbjct: 122  GRSDSCGCQVPKSIECVRFHITERRLRVMRELAKAFNQWRFDRMGEEVKLSWTVEEQKKF 181

Query: 1250 RIVVKMNPVSSDMSFLNPALKCLPSKSRESILSYYYNVFVLNRMSRQTR 1396
               V+ NP+S D +F     KC P + RE ++SYYYNVF+L R + Q R
Sbjct: 182  GATVRSNPLSLDKNFWVEIFKCFPGRRREDLVSYYYNVFLLQRRANQNR 230


>ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|222845282|gb|EEE82829.1|
            predicted protein [Populus trichocarpa]
          Length = 648

 Score =  146 bits (369), Expect = 1e-32
 Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 2/198 (1%)
 Frame = +2

Query: 857  SFDFMSDYIPRMAIPVGPRFQADIPDCIGIASRASLSDGNANVNSSDKRLGTLVWPIE-- 1030
            +FD   D   R  + VGP FQA++P+   + S            S  K LGT +WP+E  
Sbjct: 431  TFDGSGDGHVRRHVAVGPLFQAEVPEWTSVVSE-----------SDSKWLGTRLWPLECE 479

Query: 1031 DRDAEFSGELIGKGRPSTCLCQSPGSPECIKLHVNDERVRLKFDISSAFYSWKFDEMGEE 1210
            + +A F+ + IG GRPS C CQ PGS  C++ H+ ++R++LK ++   FY W+FD MGEE
Sbjct: 480  NHNAVFAMDPIGNGRPSVCGCQLPGSVGCVRFHIAEKRIKLKLELGYLFYHWQFDRMGEE 539

Query: 1211 VSKSWTPAEERCFRIVVKMNPVSSDMSFLNPALKCLPSKSRESILSYYYNVFVLNRMSRQ 1390
            VS  WT  EE+ F+ +VK N +S+   F +   K  P K+RE ++SYY+N +++ R S Q
Sbjct: 540  VSLRWTTEEEKRFKDMVKFNLLSAGKCFWDNKHKYFPRKTREELVSYYFNAYLVRRRSYQ 599

Query: 1391 TRLXXXXXXXXXXETNEG 1444
             R+          ET  G
Sbjct: 600  NRVTPKNIDSDDDETEFG 617


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