BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021370
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144773.1| PREDICTED: 60S ribosomal protein L18-3-like ...    94   1e-17
ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259...    92   5e-17
emb|CBI39539.3| unnamed protein product [Vitis vinifera]               92   5e-17
ref|XP_002301485.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
emb|CAN65685.1| hypothetical protein VITISV_022459 [Vitis vinifera]    91   1e-16

>ref|XP_004144773.1| PREDICTED: 60S ribosomal protein L18-3-like [Cucumis sativus]
           gi|449490874|ref|XP_004158733.1| PREDICTED: 60S
           ribosomal protein L18-3-like [Cucumis sativus]
          Length = 187

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 68/139 (48%), Positives = 80/139 (57%), Gaps = 17/139 (12%)
 Frame = -3

Query: 533 GIDLIASGKSKKT-RTGPKSDDIYLKLLVK--------N*EQVQCCCLEKT-LHEENQQT 384
           GIDL+A GKSKKT RT PKSDDIYLKLLVK                 L++  + + N+  
Sbjct: 2   GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPP 61

Query: 383 SHVC*CLSPD*FVT*KERRIXXXXXXXXLQTIHVF-------MKLRFTETARARIEKAGG 225
             +   +    ++  KE RI           I V+         LRFTETARARIEKAGG
Sbjct: 62  ISLSRLIK---YMNGKEGRIAVIVGTVTDD-IRVYEVPALKVTALRFTETARARIEKAGG 117

Query: 224 ECLTFDQLALKAPLGQNTV 168
           ECLTFDQLAL+APLGQNTV
Sbjct: 118 ECLTFDQLALRAPLGQNTV 136


>ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259659 [Vitis vinifera]
          Length = 429

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 66/143 (46%), Positives = 84/143 (58%), Gaps = 17/143 (11%)
 Frame = -3

Query: 545 IVSQGIDLIASGKSKKT-RTGPKSDDIYLKLLV--------KN*EQVQCCCLEKT-LHEE 396
           +++ GIDL+A GKSKKT RT PKSDDIYLKLLV        +   +     L++  + + 
Sbjct: 240 LLTMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKV 299

Query: 395 NQQTSHVC*CLSPD*FVT*KERRIXXXXXXXXLQTIHVF-------MKLRFTETARARIE 237
           N+    +   +    ++  KE +I           I V+         LRFTETARARIE
Sbjct: 300 NKPPLSLSRLVR---YMGGKEGKIAVVVGTVTDD-IRVYEVPALKVTALRFTETARARIE 355

Query: 236 KAGGECLTFDQLALKAPLGQNTV 168
           KAGGECLTFDQLAL+APLGQNTV
Sbjct: 356 KAGGECLTFDQLALRAPLGQNTV 378


>emb|CBI39539.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 66/143 (46%), Positives = 84/143 (58%), Gaps = 17/143 (11%)
 Frame = -3

Query: 545 IVSQGIDLIASGKSKKT-RTGPKSDDIYLKLLV--------KN*EQVQCCCLEKT-LHEE 396
           +++ GIDL+A GKSKKT RT PKSDDIYLKLLV        +   +     L++  + + 
Sbjct: 60  LLTMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKV 119

Query: 395 NQQTSHVC*CLSPD*FVT*KERRIXXXXXXXXLQTIHVF-------MKLRFTETARARIE 237
           N+    +   +    ++  KE +I           I V+         LRFTETARARIE
Sbjct: 120 NKPPLSLSRLVR---YMGGKEGKIAVVVGTVTDD-IRVYEVPALKVTALRFTETARARIE 175

Query: 236 KAGGECLTFDQLALKAPLGQNTV 168
           KAGGECLTFDQLAL+APLGQNTV
Sbjct: 176 KAGGECLTFDQLALRAPLGQNTV 198


>ref|XP_002301485.1| predicted protein [Populus trichocarpa] gi|222843211|gb|EEE80758.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 68/139 (48%), Positives = 80/139 (57%), Gaps = 17/139 (12%)
 Frame = -3

Query: 533 GIDLIASGKSKKT-RTGPKSDDIYLKLLVK--------N*EQVQCCCLEKTLHEE-NQQT 384
           GIDL A GKSKKT RT PKSDDIYLKLLVK           +     L++    + N+  
Sbjct: 2   GIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKPP 61

Query: 383 SHVC*CLSPD*FVT*KERRIXXXXXXXXLQTIHVF-------MKLRFTETARARIEKAGG 225
             +   ++   F+  KE +I           I V+         LRFTETARARIEKAGG
Sbjct: 62  LSLSRLIT---FMKGKEDKIAVVVGTITDD-IRVYEVPALKVTALRFTETARARIEKAGG 117

Query: 224 ECLTFDQLALKAPLGQNTV 168
           ECLTFDQLAL+APLGQNTV
Sbjct: 118 ECLTFDQLALRAPLGQNTV 136


>emb|CAN65685.1| hypothetical protein VITISV_022459 [Vitis vinifera]
          Length = 187

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 66/139 (47%), Positives = 81/139 (58%), Gaps = 17/139 (12%)
 Frame = -3

Query: 533 GIDLIASGKSKKT-RTGPKSDDIYLKLLV--------KN*EQVQCCCLEKT-LHEENQQT 384
           GIDL+A GKSKKT RT PKSDDIYLKLLV        +   +     L++  + + N+  
Sbjct: 2   GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPP 61

Query: 383 SHVC*CLSPD*FVT*KERRIXXXXXXXXLQTIHVF-------MKLRFTETARARIEKAGG 225
             +   +    ++  KE +I           I V+         LRFTETARARIEKAGG
Sbjct: 62  LSLSRLVR---YMGGKEGKIAVVVGTVTDD-IRVYEVPALKVTALRFTETARARIEKAGG 117

Query: 224 ECLTFDQLALKAPLGQNTV 168
           ECLTFDQLAL+APLGQNTV
Sbjct: 118 ECLTFDQLALRAPLGQNTV 136