BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021365
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    74   2e-11
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    68   7e-10
ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript...    64   2e-08
ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript...    62   5e-08
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    61   1e-07

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/80 (40%), Positives = 43/80 (53%)
 Frame = +2

Query: 17  AYDAIRERANVLPWAKFLWSAEVLPRTLGIGWKILHGTIHTDEKLRGKNFKLASRCCICT 196
           AY  I E  N + W KFLW++ + P    I W++LH  + TDE LR +   + S CC C 
Sbjct: 23  AYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCM 82

Query: 197 VAEETQDHILFECSFAQRCW 256
            + E+  HI FEC    R W
Sbjct: 83  KSAESSQHIFFECHVTSRLW 102


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/80 (36%), Positives = 44/80 (55%)
 Frame = +2

Query: 17  AYDAIRERANVLPWAKFLWSAEVLPRTLGIGWKILHGTIHTDEKLRGKNFKLASRCCICT 196
           +Y    +  N   WAK +WS ++ P    + W+++H  + TDEKL+ +  +L S C +C 
Sbjct: 99  SYAFKNQPVNTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGCQLPSMCSLCG 158

Query: 197 VAEETQDHILFECSFAQRCW 256
              ET  H+ FEC FA R W
Sbjct: 159 THVETSFHLFFECCFAFRIW 178


>ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 295

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/91 (32%), Positives = 46/91 (50%)
 Frame = +2

Query: 2   FTVGSAYDAIRERANVLPWAKFLWSAEVLPRTLGIGWKILHGTIHTDEKLRGKNFKLASR 181
           F+    ++ IR  +  +PWAK +W  E +PR   I W      + T ++LRG    + S 
Sbjct: 109 FSSRDTWEQIRVHSPTVPWAKVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSS 168

Query: 182 CCICTVAEETQDHILFECSFAQRCW*LIAHK 274
             +C+  +ET  H+ FECSF+   W   A K
Sbjct: 169 WVLCSNGDETHAHLFFECSFSLAIWEFFASK 199


>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 289

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/85 (34%), Positives = 44/85 (51%)
 Frame = +2

Query: 2   FTVGSAYDAIRERANVLPWAKFLWSAEVLPRTLGIGWKILHGTIHTDEKLRGKNFKLASR 181
           F+    +DAIR RA  L WAK +W    +P+     W      + T ++L       +  
Sbjct: 109 FSSARTWDAIRPRAPELDWAKAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFD 168

Query: 182 CCICTVAEETQDHILFECSFAQRCW 256
           CC+CT+  E++DH+LF C FA + W
Sbjct: 169 CCLCTIETESRDHLLFSCEFAAQVW 193


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 24/76 (31%), Positives = 41/76 (53%)
 Frame = +2

Query: 29   IRERANVLPWAKFLWSAEVLPRTLGIGWKILHGTIHTDEKLRGKNFKLASRCCICTVAEE 208
            IRE+  V  W K +W +   P+   I W   H  + T +K+   N  ++S C +C ++ E
Sbjct: 1230 IREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAE 1289

Query: 209  TQDHILFECSFAQRCW 256
            ++DH+ F C+F+   W
Sbjct: 1290 SRDHLFFSCNFSSHIW 1305