BLASTX nr result

ID: Coptis23_contig00021358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021358
         (1430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279930.1| PREDICTED: uncharacterized protein LOC100248...   394   e-107
emb|CBI15987.3| unnamed protein product [Vitis vinifera]              388   e-105
ref|XP_002525610.1| conserved hypothetical protein [Ricinus comm...   384   e-104
ref|XP_002314116.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_002299819.1| predicted protein [Populus trichocarpa] gi|2...   367   5e-99

>ref|XP_002279930.1| PREDICTED: uncharacterized protein LOC100248366 isoform 1 [Vitis
            vinifera]
          Length = 386

 Score =  394 bits (1011), Expect = e-107
 Identities = 219/376 (58%), Positives = 254/376 (67%), Gaps = 11/376 (2%)
 Frame = +1

Query: 250  HLGCFFISTTN-ERTSSKKRKVTP-DSHSISSTYHTKLHKPLIXXXXXXXXXXXXXYLKK 423
            HLGCF  +  + +R  S+KRKV+P  SH +S        +  +             YLKK
Sbjct: 22   HLGCFMFTVEDGDRRPSRKRKVSPVSSHHLSPMDSRSRSRNALSSSWF--------YLKK 73

Query: 424  IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLVSVPTPADTRTSTPSRKRRNLSM- 600
            I                                 S+VSV  P     S P RK    +  
Sbjct: 74   IFASKPCTASMDTQPATATVSSARSSL------HSVVSVVLPEMMVVSDPQRKVPTATRP 127

Query: 601  -SDISMDHQSFPLRNDIFPCPTCGEIFHKTQLLENHQSVKHAVSELYDGDSGKNIVKIIF 777
             SDIS DHQ FPLRNDIFPCP CGE+F K Q LE HQ++KHAVSEL DGDSG NIV+IIF
Sbjct: 128  ESDISADHQFFPLRNDIFPCPACGEVFQKPQNLEQHQALKHAVSELIDGDSGNNIVRIIF 187

Query: 778  KTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYREFVKSKAVN---ARRREERCIADGNE 948
            KT W D E K P I RILKIHNS+KILA+FEEYRE VKSKA      RRR+ERCIADGNE
Sbjct: 188  KTGWTDSE-KIPKIQRILKIHNSSKILARFEEYRESVKSKAARNGAVRRRDERCIADGNE 246

Query: 949  LLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIRSGFSGKIDGISTMSSSWKAHVTIPED 1128
            LLRFHCSTF+CNLGQNGNSS+C+ QYCSVCGIIR+GFS K+DGIST+S+SW+AH TIPED
Sbjct: 247  LLRFHCSTFLCNLGQNGNSSVCNHQYCSVCGIIRTGFSPKLDGISTLSTSWRAHATIPED 306

Query: 1129 LEEEFAFMNVKRAMLVCRVVAGRIGSDQELVDTDESSFDSVVGR---GHGGTQFR-SEED 1296
            +E+EF FMNVKRAMLVCRVVAGRIGSDQ+ VD ++  FDSVVGR   G GG+  R  +++
Sbjct: 307  IEDEFRFMNVKRAMLVCRVVAGRIGSDQDEVDKEDGGFDSVVGRSAIGGGGSLTRLVDDE 366

Query: 1297 ELLVFNPRAVLPCFAI 1344
            ELLVFNPR+VLPCF I
Sbjct: 367  ELLVFNPRSVLPCFVI 382


>emb|CBI15987.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  388 bits (997), Expect = e-105
 Identities = 199/282 (70%), Positives = 226/282 (80%), Gaps = 9/282 (3%)
 Frame = +1

Query: 526  SLVSVPTPADTRTSTPSRKRRNLSM--SDISMDHQSFPLRNDIFPCPTCGEIFHKTQLLE 699
            S+VSV  P     S P RK    +   SDIS DHQ FPLRNDIFPCP CGE+F K Q LE
Sbjct: 49   SVVSVVLPEMMVVSDPQRKVPTATRPESDISADHQFFPLRNDIFPCPACGEVFQKPQNLE 108

Query: 700  NHQSVKHAVSELYDGDSGKNIVKIIFKTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYR 879
             HQ++KHAVSEL DGDSG NIV+IIFKT W D E K P I RILKIHNS+KILA+FEEYR
Sbjct: 109  QHQALKHAVSELIDGDSGNNIVRIIFKTGWTDSE-KIPKIQRILKIHNSSKILARFEEYR 167

Query: 880  EFVKSKAVN---ARRREERCIADGNELLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIR 1050
            E VKSKA      RRR+ERCIADGNELLRFHCSTF+CNLGQNGNSS+C+ QYCSVCGIIR
Sbjct: 168  ESVKSKAARNGAVRRRDERCIADGNELLRFHCSTFLCNLGQNGNSSVCNHQYCSVCGIIR 227

Query: 1051 SGFSGKIDGISTMSSSWKAHVTIPEDLEEEFAFMNVKRAMLVCRVVAGRIGSDQELVDTD 1230
            +GFS K+DGIST+S+SW+AH TIPED+E+EF FMNVKRAMLVCRVVAGRIGSDQ+ VD +
Sbjct: 228  TGFSPKLDGISTLSTSWRAHATIPEDIEDEFRFMNVKRAMLVCRVVAGRIGSDQDEVDKE 287

Query: 1231 ESSFDSVVGR---GHGGTQFR-SEEDELLVFNPRAVLPCFAI 1344
            +  FDSVVGR   G GG+  R  +++ELLVFNPR+VLPCF I
Sbjct: 288  DGGFDSVVGRSAIGGGGSLTRLVDDEELLVFNPRSVLPCFVI 329


>ref|XP_002525610.1| conserved hypothetical protein [Ricinus communis]
            gi|223535046|gb|EEF36728.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 448

 Score =  384 bits (985), Expect = e-104
 Identities = 215/382 (56%), Positives = 257/382 (67%), Gaps = 17/382 (4%)
 Frame = +1

Query: 250  HLGCF-FISTTNERTSSKKRKVTPDSHSISSTYHTKL---HKPLIXXXXXXXXXXXXXYL 417
            HLGCF F +    +  ++KRK +P   S SS+  ++L   HK L              YL
Sbjct: 79   HLGCFTFTAKDQHQPPTRKRKASPPPSSSSSSSPSRLRVSHKAL---------SSSWSYL 129

Query: 418  KKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLVSVPTPADTRTS---TPSRKRR 588
            K+I                                 S+V+V  P +       TP RK+ 
Sbjct: 130  KRIFSSKAHKPISQAQSPAPTLASARSSQ------HSIVTVAVPQEDHQVSDITPPRKKP 183

Query: 589  NLSM--SDISMDH-QSFPLRNDIFPCPTCGEIFHKTQLLENHQSVKHAVSELYDGDSGKN 759
            + S   SDIS  + Q FPLRNDIFPC  CGEIF K QLLE HQ++KHAVSEL DGDSGKN
Sbjct: 184  SGSCQESDISTSNDQFFPLRNDIFPCTACGEIFQKPQLLEQHQAIKHAVSELVDGDSGKN 243

Query: 760  IVKIIFKTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYREFVKSKAVN----ARRREER 927
            IV IIFKT W+ K+ KNP IHRILKIHNS KIL++FEEYRE VK+KA       +RR+ER
Sbjct: 244  IVHIIFKTGWSCKD-KNPEIHRILKIHNSPKILSRFEEYRELVKAKAARNSSTIKRRDER 302

Query: 928  CIADGNELLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIRSGFSGKIDGISTMSSSWKA 1107
            CIADGNELLRF+CSTF+C+LG NGNSS+CSQQYCSVCGII+SGFS K+DGIST+SSSW+A
Sbjct: 303  CIADGNELLRFYCSTFMCDLGVNGNSSICSQQYCSVCGIIKSGFSPKLDGISTLSSSWRA 362

Query: 1108 HVTIPEDLEEEFAFMNVKRAMLVCRVVAGRIGSDQEL---VDTDESSFDSVVGRGHGGTQ 1278
            HV +PED+EEEF FMNVKRAMLVCRVVAGR+G + E+   V+ ++  FDSVVGRG  G  
Sbjct: 363  HVAVPEDIEEEFRFMNVKRAMLVCRVVAGRVGCEMEVEEEVNKEDGGFDSVVGRGGSGVH 422

Query: 1279 FRSEEDELLVFNPRAVLPCFAI 1344
             R +E+ELLVFNPRAVLPCF I
Sbjct: 423  TRLDEEELLVFNPRAVLPCFVI 444


>ref|XP_002314116.1| predicted protein [Populus trichocarpa] gi|222850524|gb|EEE88071.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  374 bits (961), Expect = e-101
 Identities = 206/376 (54%), Positives = 249/376 (66%), Gaps = 11/376 (2%)
 Frame = +1

Query: 250  HLGCFFIST-------TNERTSSKKRKVTPDSHSISSTYHTKLHKPLIXXXXXXXXXXXX 408
            HLGCF  +T        +   + K++KV+P +   SS    K HK L             
Sbjct: 21   HLGCFIFTTKLDDHHPNSPPPTKKRKKVSPLAPISSSPSRLKSHKAL---------SSSW 71

Query: 409  XYLKKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLVSVPTPADTRTSTPSRKRR 588
             YLK I                                +S+V    P       P RK+ 
Sbjct: 72   SYLKSIFSSKSSKTQTQSGTPTLTSARSSQ--------QSIVPTIPPETHLPELPPRKKS 123

Query: 589  NLSM--SDISMDHQSFPLRNDIFPCPTCGEIFHKTQLLENHQSVKHAVSELYDGDSGKNI 762
            + S   SDIS DH  FPLRNDIFPC  CGEIF K QLLE HQ+ KHAV++L DGDSGKNI
Sbjct: 124  SGSCEESDISTDHHFFPLRNDIFPCTACGEIFQKPQLLEQHQATKHAVTQLLDGDSGKNI 183

Query: 763  VKIIFKTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYREFVKSKAV-NARRREERCIAD 939
            V IIFKT W+ KE K+P IHRILKIHNS KIL++FEEYREFV++KA  N++R +ERCIAD
Sbjct: 184  VHIIFKTGWSCKE-KSPEIHRILKIHNSPKILSRFEEYREFVRAKAARNSKRGDERCIAD 242

Query: 940  GNELLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIRSGFSGKIDGISTMSSSWKAHVTI 1119
            GNELLRF+CSTF+C+LG N +SS+C+QQYCSVCGII+SGFS K+DGIST+S+SW+AH+ I
Sbjct: 243  GNELLRFYCSTFMCDLGLNEDSSICNQQYCSVCGIIKSGFSPKMDGISTLSTSWRAHMAI 302

Query: 1120 PEDLEEEFAFMNVKRAMLVCRVVAGRIGSD-QELVDTDESSFDSVVGRGHGGTQFRSEED 1296
            PE++EEEF FMNVKRAMLVCRVVAGR+G D +E VD  +   DSV+GRG  G   R +E+
Sbjct: 303  PEEIEEEFKFMNVKRAMLVCRVVAGRVGCDLEEDVDKQDGGSDSVLGRGGSGVHTRLDEE 362

Query: 1297 ELLVFNPRAVLPCFAI 1344
            ELLVFNPRAVLPCF I
Sbjct: 363  ELLVFNPRAVLPCFVI 378


>ref|XP_002299819.1| predicted protein [Populus trichocarpa] gi|222847077|gb|EEE84624.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  367 bits (941), Expect = 5e-99
 Identities = 183/264 (69%), Positives = 214/264 (81%), Gaps = 6/264 (2%)
 Frame = +1

Query: 571  PSRKRRNLSMS--DISMDHQSFPLRNDIFPCPTCGEIFHKTQLLENHQSVKHAVSELYDG 744
            P RK+   S    DIS DHQ FPLRNDIFPC  CGE+F K QLLE HQ++KHAV++L DG
Sbjct: 13   PPRKKSTGSCEEPDISTDHQFFPLRNDIFPCTACGEVFQKPQLLEQHQAIKHAVTQLLDG 72

Query: 745  DSGKNIVKIIFKTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYREFVKSKAVN---ARR 915
            DSGKNIV IIFKT W+ KE K+P I RILKIHNS KIL++FEEYREFVK+KA      +R
Sbjct: 73   DSGKNIVDIIFKTGWSCKE-KSPEIRRILKIHNSPKILSRFEEYREFVKTKAARNSPIKR 131

Query: 916  REERCIADGNELLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIRSGFSGKIDGISTMSS 1095
            R+ERCIADGNELLRF CSTF+C+LG NG+SS+C+QQYCSVCGII+SGFS K+DGIST+S+
Sbjct: 132  RDERCIADGNELLRFFCSTFMCDLGLNGDSSICNQQYCSVCGIIKSGFSPKMDGISTLST 191

Query: 1096 SWKAHVTIPEDLEEEFAFMNVKRAMLVCRVVAGRIGSD-QELVDTDESSFDSVVGRGHGG 1272
            SW+AH+  PE++EEEF FMNVKRAMLVCRVVAGRIG D  E +D  +S  DSV+GRG  G
Sbjct: 192  SWRAHMAFPEEIEEEFKFMNVKRAMLVCRVVAGRIGCDLDEDIDKQDSGSDSVLGRGGSG 251

Query: 1273 TQFRSEEDELLVFNPRAVLPCFAI 1344
               R +E+ELLVFNPRAVLPCF I
Sbjct: 252  IHTRVDEEELLVFNPRAVLPCFVI 275


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