BLASTX nr result

ID: Coptis23_contig00021353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021353
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24391.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002319682.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002515846.1| small heat-shock protein, putative [Ricinus ...    58   9e-07
emb|CBI39047.3| unnamed protein product [Vitis vinifera]               57   2e-06
gb|AFK46570.1| unknown [Medicago truncatula]                           56   3e-06

>emb|CBI24391.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/58 (53%), Positives = 38/58 (65%)
 Frame = -3

Query: 380 PIEGNRWSRFRKEFSAPQNCNTNEITAKFTGGLLYVKFPKKISDVIEQDERERTQAAP 207
           PI G RW+RF KE   P+NC+TN I AKF  G+LYV+FPK IS   EQ +  + Q  P
Sbjct: 60  PIGGERWNRFYKEVQVPKNCDTNAIIAKFENGILYVQFPKVISTPAEQQDTVKPQTQP 117


>ref|XP_002319682.1| predicted protein [Populus trichocarpa] gi|222858058|gb|EEE95605.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -3

Query: 377 IEGNRWSRFRKEFSAPQNCNTNEITAKFTGGLLYVKFPKKISDVIEQDE--RERTQAAP- 207
           ++ +RW+RFRKE   P+ CN NE+ A  + G+LY+  PKKI+    QD+  +E  Q++P 
Sbjct: 58  VDESRWTRFRKEIKVPKECNNNEVRANLSTGILYIVMPKKITLPSSQDQVNQENGQSSPK 117

Query: 206 ADENTVNEKKKSDQVSGS 153
            +++TV +   ++ + GS
Sbjct: 118 INQDTVAKDTATENLDGS 135


>ref|XP_002515846.1| small heat-shock protein, putative [Ricinus communis]
           gi|223545001|gb|EEF46515.1| small heat-shock protein,
           putative [Ricinus communis]
          Length = 255

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/70 (41%), Positives = 39/70 (55%)
 Frame = -3

Query: 377 IEGNRWSRFRKEFSAPQNCNTNEITAKFTGGLLYVKFPKKISDVIEQDERERTQAAPADE 198
           + GN+W RFRKE   P N  TNEI+AKF  G LYVK PK I    E  + +R   A  + 
Sbjct: 64  VSGNKWIRFRKEILIPSNYETNEISAKFEKGALYVKHPKIIVQDPEPPQEKRKDQALVEA 123

Query: 197 NTVNEKKKSD 168
               ++K ++
Sbjct: 124 PKPGQEKPAE 133


>emb|CBI39047.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/73 (39%), Positives = 38/73 (52%)
 Frame = -3

Query: 374 EGNRWSRFRKEFSAPQNCNTNEITAKFTGGLLYVKFPKKISDVIEQDERERTQAAPADEN 195
           +GN WSRF +E   P+NCN N I AKF  G L++  PK I+    QD+     A P  E+
Sbjct: 66  DGNTWSRFHREIRVPKNCNMNGIQAKFLRGNLHIIMPKNINSTAAQDQ----AAPPVGES 121

Query: 194 TVNEKKKSDQVSG 156
               K K  +  G
Sbjct: 122 QEQGKAKLKEEKG 134


>gb|AFK46570.1| unknown [Medicago truncatula]
          Length = 154

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/70 (37%), Positives = 41/70 (58%)
 Frame = -3

Query: 380 PIEGNRWSRFRKEFSAPQNCNTNEITAKFTGGLLYVKFPKKISDVIEQDERERTQAAPAD 201
           P +G +W RF+KEF  P+ CN + I   F   +L V  PKK+ D+I Q+E+E  +  P  
Sbjct: 58  PFDGTKWKRFKKEFELPKYCNEDAIRGNFMQNILSVVLPKKV-DLIPQEEQEEEEKIPEL 116

Query: 200 ENTVNEKKKS 171
           E+    ++K+
Sbjct: 117 EDLDKYQEKN 126


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