BLASTX nr result

ID: Coptis23_contig00021335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021335
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...   165   1e-38
emb|CBI26466.3| unnamed protein product [Vitis vinifera]              165   1e-38
ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [...   150   3e-34
ref|XP_002520086.1| conserved hypothetical protein [Ricinus comm...   147   2e-33
ref|XP_003539001.1| PREDICTED: uncharacterized protein LOC100787...   137   2e-30

>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score =  165 bits (418), Expect = 1e-38
 Identities = 89/162 (54%), Positives = 103/162 (63%)
 Frame = +1

Query: 1   RYLQGMKQDADERSFFSDASGSARGLGMDSSLDSTGRLITSRVPSFPESKSRNGSIMQTD 180
           RYL G+K +  E SFFS+ASGS RGL MDS LDST  L+ SRV SFP SKS   SI+Q+D
Sbjct: 193 RYLHGLKPEVGEHSFFSEASGSNRGLQMDSPLDSTWPLMPSRVSSFPPSKSSENSILQSD 252

Query: 181 YPQMHTHQDFGNTGITVALSKQTQQQQHCFFGGEFGLAEPVKQEGQSLRPFFDEWPKTRD 360
           YPQ                        H FF  EF   E VKQEGQSLRPFFDEWPKTRD
Sbjct: 253 YPQ------------------------HSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRD 288

Query: 361 AWSDLDDDRSNRTSFSTTQLSISIPIAXXXXXXXXXXXPNDD 486
           +WS L+++RSN+TSFSTTQLSISIP+A           P+D+
Sbjct: 289 SWSGLEEERSNQTSFSTTQLSISIPMASSDFSTTSSRSPHDN 330


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  165 bits (418), Expect = 1e-38
 Identities = 89/162 (54%), Positives = 103/162 (63%)
 Frame = +1

Query: 1   RYLQGMKQDADERSFFSDASGSARGLGMDSSLDSTGRLITSRVPSFPESKSRNGSIMQTD 180
           RYL G+K +  E SFFS+ASGS RGL MDS LDST  L+ SRV SFP SKS   SI+Q+D
Sbjct: 236 RYLHGLKPEVGEHSFFSEASGSNRGLQMDSPLDSTWPLMPSRVSSFPPSKSSENSILQSD 295

Query: 181 YPQMHTHQDFGNTGITVALSKQTQQQQHCFFGGEFGLAEPVKQEGQSLRPFFDEWPKTRD 360
           YPQ                        H FF  EF   E VKQEGQSLRPFFDEWPKTRD
Sbjct: 296 YPQ------------------------HSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRD 331

Query: 361 AWSDLDDDRSNRTSFSTTQLSISIPIAXXXXXXXXXXXPNDD 486
           +WS L+++RSN+TSFSTTQLSISIP+A           P+D+
Sbjct: 332 SWSGLEEERSNQTSFSTTQLSISIPMASSDFSTTSSRSPHDN 373


>ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [Cucumis sativus]
           gi|449484096|ref|XP_004156783.1| PREDICTED:
           growth-regulating factor 3-like [Cucumis sativus]
          Length = 336

 Score =  150 bits (379), Expect = 3e-34
 Identities = 76/147 (51%), Positives = 99/147 (67%)
 Frame = +1

Query: 1   RYLQGMKQDADERSFFSDASGSARGLGMDSSLDSTGRLITSRVPSFPESKSRNGSIMQTD 180
           RYLQG++ +A   SFFS+ASGS+R + MD+ +D+T  +++SR PSFP SKS   SI Q+ 
Sbjct: 200 RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPIDNTWPMMSSRSPSFPASKSTENSIFQSG 259

Query: 181 YPQMHTHQDFGNTGITVALSKQTQQQQHCFFGGEFGLAEPVKQEGQSLRPFFDEWPKTRD 360
           Y Q                        H FFGGE+   E +KQEGQSL+P FDEWP+TR+
Sbjct: 260 YAQ------------------------HSFFGGEYASGETLKQEGQSLQPLFDEWPRTRE 295

Query: 361 AWSDLDDDRSNRTSFSTTQLSISIPIA 441
           +W+ LDD+RSN+TSFSTTQLSISIP+A
Sbjct: 296 SWTGLDDERSNQTSFSTTQLSISIPMA 322


>ref|XP_002520086.1| conserved hypothetical protein [Ricinus communis]
           gi|223540850|gb|EEF42410.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 259

 Score =  147 bits (372), Expect = 2e-33
 Identities = 80/162 (49%), Positives = 98/162 (60%)
 Frame = +1

Query: 1   RYLQGMKQDADERSFFSDASGSARGLGMDSSLDSTGRLITSRVPSFPESKSRNGSIMQTD 180
           RY+QG+K +  E SFFS+ASGS RG+ MDS L++   L+ SRV +F  SKS + SI+Q  
Sbjct: 122 RYVQGLKSEVGEHSFFSEASGSNRGVQMDSQLENAWPLMQSRVSTFNVSKSTDNSILQNG 181

Query: 181 YPQMHTHQDFGNTGITVALSKQTQQQQHCFFGGEFGLAEPVKQEGQSLRPFFDEWPKTRD 360
           YPQ                          +F GEFG  E VKQ GQSLRPF DEWPKTRD
Sbjct: 182 YPQSS------------------------YFSGEFGTGESVKQGGQSLRPFLDEWPKTRD 217

Query: 361 AWSDLDDDRSNRTSFSTTQLSISIPIAXXXXXXXXXXXPNDD 486
           +WS L+DDRSN TSFSTT+LSIS P+A           P+D+
Sbjct: 218 SWSGLEDDRSNPTSFSTTRLSISTPMASSDLSTPSSRSPHDN 259


>ref|XP_003539001.1| PREDICTED: uncharacterized protein LOC100787567 [Glycine max]
          Length = 341

 Score =  137 bits (346), Expect = 2e-30
 Identities = 70/147 (47%), Positives = 97/147 (65%)
 Frame = +1

Query: 1   RYLQGMKQDADERSFFSDASGSARGLGMDSSLDSTGRLITSRVPSFPESKSRNGSIMQTD 180
           RY+QG+K +  E  FFS+ASGS + L M+S L++T  L+++RV SF  SKS N S++ +D
Sbjct: 199 RYVQGLKSEGGEHCFFSEASGSNKVLQMESQLENTWPLMSTRVASFSTSKSSNDSLLHSD 258

Query: 181 YPQMHTHQDFGNTGITVALSKQTQQQQHCFFGGEFGLAEPVKQEGQSLRPFFDEWPKTRD 360
           YP+                        H F  GE+   E VK+EGQ LRPFF+EWPK+R+
Sbjct: 259 YPR------------------------HSFLSGEYVSGEHVKEEGQPLRPFFNEWPKSRE 294

Query: 361 AWSDLDDDRSNRTSFSTTQLSISIPIA 441
           +WS L+D+RSN+T+FSTTQLSISIP++
Sbjct: 295 SWSGLEDERSNQTAFSTTQLSISIPMS 321


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