BLASTX nr result

ID: Coptis23_contig00021333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021333
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]      80   2e-13
emb|CBI35491.3| unnamed protein product [Vitis vinifera]               80   2e-13
emb|CAN66427.1| hypothetical protein VITISV_029011 [Vitis vinifera]    80   2e-13
ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis] gi...    78   6e-13
ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13

>ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]
          Length = 218

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/68 (61%), Positives = 54/68 (79%)
 Frame = -3

Query: 225 PVIIYTISPKVIHTNASDFMSLVQRLTGPSTSIPSPINQAQASGALSPAARYASIEKTKM 46
           PVIIYT+SPK+IHT  S+FM+LVQRLTG S+S  S  +    SGA+SPAAR+ASIEKTK+
Sbjct: 49  PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSS--SSSSAPLDSGAVSPAARFASIEKTKV 106

Query: 45  PSEGDKPR 22
            +E +K +
Sbjct: 107 SAEEEKKK 114


>emb|CBI35491.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/68 (61%), Positives = 54/68 (79%)
 Frame = -3

Query: 225 PVIIYTISPKVIHTNASDFMSLVQRLTGPSTSIPSPINQAQASGALSPAARYASIEKTKM 46
           PVIIYT+SPK+IHT  S+FM+LVQRLTG S+S  S  +    SGA+SPAAR+ASIEKTK+
Sbjct: 61  PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSS--SSSSAPLDSGAVSPAARFASIEKTKV 118

Query: 45  PSEGDKPR 22
            +E +K +
Sbjct: 119 SAEEEKKK 126


>emb|CAN66427.1| hypothetical protein VITISV_029011 [Vitis vinifera]
          Length = 252

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/68 (61%), Positives = 54/68 (79%)
 Frame = -3

Query: 225 PVIIYTISPKVIHTNASDFMSLVQRLTGPSTSIPSPINQAQASGALSPAARYASIEKTKM 46
           PVIIYT+SPK+IHT  S+FM+LVQRLTG S+S  S  +    SGA+SPAAR+ASIEKTK+
Sbjct: 49  PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSS--SSSSAPLDSGAVSPAARFASIEKTKV 106

Query: 45  PSEGDKPR 22
            +E +K +
Sbjct: 107 SAEEEKKK 114


>ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis]
           gi|223534513|gb|EEF36212.1| Protein MKS1, putative
           [Ricinus communis]
          Length = 254

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 18/84 (21%)
 Frame = -3

Query: 225 PVIIYTISPKVIHTNASDFMSLVQRLTGPSTSIPSPINQAQA------------------ 100
           PVIIYT+SPKVIHTN SDFM+LVQRLTG ++S  S  + + A                  
Sbjct: 61  PVIIYTVSPKVIHTNPSDFMNLVQRLTGSTSSSSSSSSSSAACSTSNPTSYSSSNPFNDY 120

Query: 99  SGALSPAARYASIEKTKMPSEGDK 28
           SGA+SPAAR+A+IEK K P+E  K
Sbjct: 121 SGAISPAARFATIEKAKSPNENMK 144


>ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|222843914|gb|EEE81461.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/73 (54%), Positives = 50/73 (68%)
 Frame = -3

Query: 225 PVIIYTISPKVIHTNASDFMSLVQRLTGPSTSIPSPINQAQASGALSPAARYASIEKTKM 46
           PVIIYT+SPKVIHTN +DFM+LVQRLTG S++  S        GA+SPAAR+A+IEK   
Sbjct: 89  PVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSTSTSSNPFNDDCGAISPAARFATIEKANS 148

Query: 45  PSEGDKPRYYNMD 7
           P +  K +    D
Sbjct: 149 PKDQQKQQQLGGD 161


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