BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021320
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1510387A retrotransposon del1-46                                  49   2e-10
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]    52   2e-09
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]    52   2e-09
emb|CAN61575.1| hypothetical protein VITISV_014037 [Vitis vinifera]    51   4e-09
emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]    39   5e-09

>prf||1510387A retrotransposon del1-46
          Length = 1443

 Score = 49.3 bits (116), Expect(3) = 2e-10
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = +1

Query: 205 YMELKQGNMTVFAYEARIELLSRFAPYKL-TNELLVEKFVSGLRSSIRMYLVGLNLKNYS 381
           +M L QG++TV  YEA+ E LSR+APY++  N   V++F  GL+ SI   L    +K+Y 
Sbjct: 153 FMTLVQGSLTVAQYEAKFEELSRYAPYQVDINIRKVKRFEQGLKLSITKQLSSHLIKDYR 212

Query: 382 DAVQQA 399
           + + +A
Sbjct: 213 EVITRA 218



 Score = 37.4 bits (85), Expect(3) = 2e-10
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +2

Query: 29  SDNRKVALATFMLQGKAYDWWLVEERLRGEE--PVSWDHF 142
           +D +KV LA+F LQG+A  WW  + R R ++   + WD F
Sbjct: 94  TDEQKVILASFQLQGEAEFWWDAKVRSREDDTTQIKWDEF 133



 Score = 23.5 bits (49), Expect(3) = 2e-10
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 516 SSSGQPTSQTGVCYNCRRPGHIARN 590
           S    P S   VCY+  +PGH   N
Sbjct: 259 SQCPNPLSPGKVCYSYGQPGHFKSN 283


>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score = 52.4 bits (124), Expect(2) = 2e-09
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
 Frame = +1

Query: 157 EEVFLGKYSASVGFRI----YMELKQGNMTVFAYEARIELLSRFAPYKLTNE-LLVEKFV 321
           E +FLGKY   V        +  L QG M+V  YE+R   LSRFA   ++ E     +F 
Sbjct: 192 ERIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRFALGMISEEGEKARRFQ 251

Query: 322 SGLRSSIRMYLVGLNLKNYSDAVQQA 399
            GLR +IR  LV L +++YS+ V++A
Sbjct: 252 QGLRPAIRNRLVPLAIRDYSELVKRA 277



 Score = 35.4 bits (80), Expect(2) = 2e-09
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 32  DNRKVALATFMLQGKAYDWWLVEERLRGEEPVSWDHF 142
           + R+V LAT+ML  KA  WW   +R+   E ++W+ F
Sbjct: 155 EERRVGLATYMLVDKADFWWESMKRVYDTEVMTWEEF 191


>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score = 52.4 bits (124), Expect(2) = 2e-09
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
 Frame = +1

Query: 157 EEVFLGKYSASVGFRI----YMELKQGNMTVFAYEARIELLSRFAPYKLTNE-LLVEKFV 321
           E +FLGKY   V        +  L QG M+V  YE+R   LSRFA   ++ E     +F 
Sbjct: 127 ERIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRFALGMISEEGEKARRFQ 186

Query: 322 SGLRSSIRMYLVGLNLKNYSDAVQQA 399
            GLR +IR  LV L +++YS+ V++A
Sbjct: 187 QGLRPAIRNRLVPLAIRDYSELVKRA 212



 Score = 35.4 bits (80), Expect(2) = 2e-09
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 32  DNRKVALATFMLQGKAYDWWLVEERLRGEEPVSWDHF 142
           + R+V LAT+ML  KA  WW   +R+   E ++W+ F
Sbjct: 90  EERRVGLATYMLVDKADFWWESMKRVYDTEVMTWEEF 126


>emb|CAN61575.1| hypothetical protein VITISV_014037 [Vitis vinifera]
          Length = 503

 Score = 51.2 bits (121), Expect(2) = 4e-09
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
 Frame = +1

Query: 157 EEVFLGKYSASVGFRI----YMELKQGNMTVFAYEARIELLSRFAPYKLTNE-LLVEKFV 321
           E +FLGKY   V        +  L QG M+V  YE+R   LSRFA   +  E     +F 
Sbjct: 149 ERIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRFALGMIGEEGEKARRFQ 208

Query: 322 SGLRSSIRMYLVGLNLKNYSDAVQQA 399
            GLR +IR  LV L +++YS+ V++A
Sbjct: 209 QGLRPAIRNRLVPLAIRDYSELVKRA 234



 Score = 35.4 bits (80), Expect(2) = 4e-09
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 32  DNRKVALATFMLQGKAYDWWLVEERLRGEEPVSWDHF 142
           + R+V LAT+ML  KA  WW   +R+   E ++W+ F
Sbjct: 112 EERRVGLATYMLVDKADFWWESMKRVYDTEVMTWEEF 148


>emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]
          Length = 360

 Score = 38.9 bits (89), Expect(3) = 5e-09
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +1

Query: 205 YMELKQGNMTVFAYEARIELLSRFAPYKL-TNELLVEKFVSGLRSSIRMYLVGLNLKNYS 381
           ++ L+QG+MTV  YEA+   LSRF+P  + T E    KF   L+  ++     L L  YS
Sbjct: 196 FIRLEQGDMTVAQYEAKFTELSRFSPQLIATEEEKALKFQDXLKPYLKNKXSILXLGXYS 255

Query: 382 DAVQQAR 402
           +  +Q R
Sbjct: 256 EYREQQR 262



 Score = 36.6 bits (83), Expect(3) = 5e-09
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 29  SDNRKVALATFMLQGKAYDWWLVEERLRGEE-PVSWDHFWXXXXXXXXXESIQRQLALEY 205
           S+ +K + A FML  +   WW +  RL  ++ P++W  F          +S++RQ   E+
Sbjct: 137 SEEQKASYAAFMLDKETDHWWRMTRRLLEDQGPITWRQFREAFYKKYFPDSVRRQKVGEF 196

Query: 206 I 208
           I
Sbjct: 197 I 197



 Score = 30.0 bits (66), Expect(3) = 5e-09
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +3

Query: 468 DQNMFEAAKRNRTVAPSSS----GQPT-SQTGVCYNCRRPGHIARNC 593
           +QN  +AA+      P+      G+P   +TG C+ C + GH+ R+C
Sbjct: 284 NQNKGKAAQNLDGACPTCGKKHGGRPCYRETGACFGCGKQGHLIRDC 330