BLASTX nr result

ID: Coptis23_contig00021312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021312
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60872.1| hypothetical protein VITISV_016380 [Vitis vinifera]   112   4e-23
ref|XP_002313419.1| predicted protein [Populus trichocarpa] gi|2...   105   7e-21
emb|CBI16080.3| unnamed protein product [Vitis vinifera]              103   3e-20
emb|CAN65209.1| hypothetical protein VITISV_043547 [Vitis vinifera]   100   2e-19
ref|XP_002520515.1| Transcriptional regulator SUPERMAN, putative...    95   1e-17

>emb|CAN60872.1| hypothetical protein VITISV_016380 [Vitis vinifera]
          Length = 186

 Score =  112 bits (281), Expect = 4e-23
 Identities = 72/171 (42%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
 Frame = +2

Query: 2   DPPNLENSDHVEIWATVEHEGPSH-LRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKLKS 178
           +PP++E  +  +I   ++ +G    +R Y C FCKRGFSNAQALGGHMNIHRKDRAKLK 
Sbjct: 4   NPPSVEKFE--QIACNLDEQGSGEQVRAYTCTFCKRGFSNAQALGGHMNIHRKDRAKLKQ 61

Query: 179 PFCDDSQLSLDIKKDDS--SNAPPLFEESELESCKQVICTLEYPGALPRGDDVVKEGESH 352
              D+S LS+D++K +      P     S+L S +   CTL+ P  L   DD+   G+  
Sbjct: 62  TE-DESLLSVDMEKKNPLIHPQPSADNLSQLGSTEGKDCTLKRPLTLSGEDDISPSGKDG 120

Query: 353 AVELQKLPLFAETPSSSTQTVSNEGGRIEDGTKQPKHISRNDGSLDLELRL 505
             +L +L LF+E PS      ++  G  E+ T+   H S +   LDLELRL
Sbjct: 121 MEKLHQLSLFSEKPSKXNDQRASSXGGHEEKTRHSHHGS-SQKELDLELRL 170


>ref|XP_002313419.1| predicted protein [Populus trichocarpa] gi|222849827|gb|EEE87374.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  105 bits (262), Expect = 7e-21
 Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 6/186 (3%)
 Frame = +2

Query: 2   DPPNLENSDHVEIWATVEHE---GPSHLRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKL 172
           D P+ E+ D V    T++HE   G S  R Y+C FCKRGFSNAQALGGHMNIHRKD+AKL
Sbjct: 5   DQPSQESPDQV----TLDHEQEQGTSQARSYECTFCKRGFSNAQALGGHMNIHRKDKAKL 60

Query: 173 KSPFCDDSQLSLDIKKDDSSNAPPLFEESELESCKQVICTLEYPGALPRG---DDVVKEG 343
                 ++Q SLDI K + S +P +   S +ES +    ++++P  + +     D  K  
Sbjct: 61  LKHSSSETQQSLDIPKINPSFSPAI--TSLMESGRDE-SSIKWPFIVDKAGSDHDDTKRD 117

Query: 344 ESHAVELQKLPLFAETPSSSTQTVSNEGGRIEDGTKQPKHISRNDGSLDLELRL*TDVQD 523
           ++   E+QKL  F +  SSST+   N   ++   +K+    S ++  +DLELRL  + Q+
Sbjct: 118 KTQVGEIQKLGFFVQN-SSSTEDHQNPSSQVHGISKKSDLSSSSE--IDLELRLWPEPQE 174

Query: 524 SEDMDH 541
           S    H
Sbjct: 175 SSPGFH 180


>emb|CBI16080.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  103 bits (257), Expect = 3e-20
 Identities = 65/163 (39%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
 Frame = +2

Query: 35  EIWATVEHEGPSHLRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKLKSPFCDDSQLSLDI 214
           ++  T + +GPS  R Y+C FCKRGFS AQALGGHMNIHRKD+AKLK    +  Q SLDI
Sbjct: 14  QVVCTSDDQGPSQARSYECTFCKRGFSTAQALGGHMNIHRKDKAKLKKASNEAQQYSLDI 73

Query: 215 KKDDSSNAP-PLFEESELESC-KQVICTLEYPGALPRGDDVVKEGESHAVELQKLPLFAE 388
            K  S  +P P   +  L++   +    + +P  +  G+D     ++   E QKL    E
Sbjct: 74  TKPASLFSPIPTNAKDPLQAMYSEERSKIAWPNWIVSGEDTTIRAQTRVGEPQKLTFLGE 133

Query: 389 TPSSSTQTVSNEGGRIEDGTKQPKHISRNDGS----LDLELRL 505
           TPS++   +      I       K +S   GS    LDLELRL
Sbjct: 134 TPSNTRDRMLTSQDMIST-VNAGKGLSSGQGSSGAELDLELRL 175


>emb|CAN65209.1| hypothetical protein VITISV_043547 [Vitis vinifera]
          Length = 193

 Score =  100 bits (249), Expect = 2e-19
 Identities = 66/164 (40%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
 Frame = +2

Query: 35  EIWATVEHEGPSHLRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKLKSPFCDDSQLSLDI 214
           ++  T + +GPS  R Y+C FCKRGFS AQALGGHMNIHRKD+AKLK    +  Q SLDI
Sbjct: 14  QVVCTSDDQGPSQARSYECTFCKRGFSTAQALGGHMNIHRKDKAKLKKASNEAQQYSLDI 73

Query: 215 KKDDSSNAP-PLFEESELESC-KQVICTLEYPGALPRG-DDVVKEGESHAVELQKLPLFA 385
            K  S  +P P   +  L++   +    + +P  +  G DD     ++   E QKL    
Sbjct: 74  TKPASLFSPIPTNAKDPLQAMYSEERSKIAWPNWIVSGEDDTTIRAQTRVGEPQKLTFLG 133

Query: 386 ETPSSSTQTVSNEGGRIEDGTKQPKHISRNDGS----LDLELRL 505
           ETPS++   +      I       K +S   GS    LDLELRL
Sbjct: 134 ETPSNTRDRMLTSQDMIST-VNAGKGLSSGQGSSGAELDLELRL 176


>ref|XP_002520515.1| Transcriptional regulator SUPERMAN, putative [Ricinus communis]
           gi|223540357|gb|EEF41928.1| Transcriptional regulator
           SUPERMAN, putative [Ricinus communis]
          Length = 246

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 68/196 (34%), Positives = 97/196 (49%), Gaps = 21/196 (10%)
 Frame = +2

Query: 2   DPPNLENSDHVEIWATVEHEGPSHLRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKLKSP 181
           D  N ENSD  +     E  G   +R Y+C FC+RGFSNAQALGGHMNIHRKD+AKLK  
Sbjct: 35  DQSNQENSDQDQ-----ERGGSCQVRSYECTFCRRGFSNAQALGGHMNIHRKDKAKLKHS 89

Query: 182 FCDDSQLSLDIKKDDSSN-----------APPLFEESELESCK-QVICTLEYPGALPRGD 325
             ++ +  L      S+N           AP      E++S + +    + +   L +  
Sbjct: 90  TSNEPRQHLQSVDMISNNIISHSFSPIPTAPSSHPVMEVKSGQDRSSPMINWAWILDKES 149

Query: 326 DVVKEGESHAVELQKLPLFAETPSSST------QTVSNEGGRIEDGTKQ---PKHISRND 478
           D  K+ ++H  E+Q+L  F + PSS+       Q    + G +   T++   P H   + 
Sbjct: 150 DTCKKNKTHVGEIQQLCFFVDNPSSTKDQDHHHQQEEQQPGNLHGSTEKGLSPSH-GLSS 208

Query: 479 GSLDLELRL*TDVQDS 526
             LDLELRL  +  DS
Sbjct: 209 SELDLELRLGPEPHDS 224


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