BLASTX nr result

ID: Coptis23_contig00021295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021295
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25172.3| unnamed protein product [Vitis vinifera]              425   e-117
ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...   425   e-117
ref|XP_002512723.1| multidrug resistance-associated protein, put...   423   e-116
ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1...   416   e-114
ref|XP_002883764.1| ATMRP11 [Arabidopsis lyrata subsp. lyrata] g...   402   e-110

>emb|CBI25172.3| unnamed protein product [Vitis vinifera]
          Length = 1205

 Score =  425 bits (1092), Expect = e-117
 Identities = 209/292 (71%), Positives = 243/292 (83%)
 Frame = +3

Query: 105  QFYYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKAKECFLARFTEHVALYQRTS 284
            QFYYRSTSRELRRLDSVSRSPI+ASFTETLDGSSTIRAFK ++ F  RF+EHVALYQ+TS
Sbjct: 801  QFYYRSTSRELRRLDSVSRSPIFASFTETLDGSSTIRAFKCEDLFFTRFSEHVALYQQTS 860

Query: 285  YTEITXXXXXXXXXXXXXXFVISFIAVMAVAGSRGGYPINFSTPGLVGLALSYAAPFVSL 464
            Y+E+                VISF+A+MAV GSR   PI+  TPGLVGLALSYAAP VSL
Sbjct: 861  YSELIASLWLSLRLQLLAALVISFVAMMAVIGSRDSLPISLGTPGLVGLALSYAAPIVSL 920

Query: 465  LSSYLASFTETEKEMVSVERVLQYMDVPQEDIKGCIFVPPHWPFQGQIDFHHVTLRYMPS 644
            L S+L SFTETEKEMVSVERVLQYMD+PQE++ GC  + P+WP +G I F +V+LRY+PS
Sbjct: 921  LGSFLTSFTETEKEMVSVERVLQYMDIPQEELNGCQSLSPNWPSEGYIMFQNVSLRYLPS 980

Query: 645  LPSALQDVTFTVAGGTQVGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRD 824
            LP AL D+TFT++GGTQVGIIGRTGAGKSS+LNALFRLTPIC G ILVD L++AD+ +RD
Sbjct: 981  LPDALHDITFTISGGTQVGIIGRTGAGKSSILNALFRLTPICKGCILVDGLDIADVPVRD 1040

Query: 825  LRSHFSVVPQSPFLFEGSLRDNLDPYGTINDSMIWETLEKCHVKDEVEAAGG 980
            LRSHF+VVPQSPFLFEGSLRDNLDP+   +D  IW+TLE+CHVK+EVE AGG
Sbjct: 1041 LRSHFAVVPQSPFLFEGSLRDNLDPFRVSDDLKIWKTLERCHVKEEVEVAGG 1092


>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score =  425 bits (1092), Expect = e-117
 Identities = 209/292 (71%), Positives = 243/292 (83%)
 Frame = +3

Query: 105  QFYYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKAKECFLARFTEHVALYQRTS 284
            QFYYRSTSRELRRLDSVSRSPI+ASFTETLDGSSTIRAFK ++ F  RF+EHVALYQ+TS
Sbjct: 901  QFYYRSTSRELRRLDSVSRSPIFASFTETLDGSSTIRAFKCEDLFFTRFSEHVALYQQTS 960

Query: 285  YTEITXXXXXXXXXXXXXXFVISFIAVMAVAGSRGGYPINFSTPGLVGLALSYAAPFVSL 464
            Y+E+                VISF+A+MAV GSR   PI+  TPGLVGLALSYAAP VSL
Sbjct: 961  YSELIASLWLSLRLQLLAALVISFVAMMAVIGSRDSLPISLGTPGLVGLALSYAAPIVSL 1020

Query: 465  LSSYLASFTETEKEMVSVERVLQYMDVPQEDIKGCIFVPPHWPFQGQIDFHHVTLRYMPS 644
            L S+L SFTETEKEMVSVERVLQYMD+PQE++ GC  + P+WP +G I F +V+LRY+PS
Sbjct: 1021 LGSFLTSFTETEKEMVSVERVLQYMDIPQEELNGCQSLSPNWPSEGYIMFQNVSLRYLPS 1080

Query: 645  LPSALQDVTFTVAGGTQVGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRD 824
            LP AL D+TFT++GGTQVGIIGRTGAGKSS+LNALFRLTPIC G ILVD L++AD+ +RD
Sbjct: 1081 LPDALHDITFTISGGTQVGIIGRTGAGKSSILNALFRLTPICKGCILVDGLDIADVPVRD 1140

Query: 825  LRSHFSVVPQSPFLFEGSLRDNLDPYGTINDSMIWETLEKCHVKDEVEAAGG 980
            LRSHF+VVPQSPFLFEGSLRDNLDP+   +D  IW+TLE+CHVK+EVE AGG
Sbjct: 1141 LRSHFAVVPQSPFLFEGSLRDNLDPFRVSDDLKIWKTLERCHVKEEVEVAGG 1192


>ref|XP_002512723.1| multidrug resistance-associated protein, putative [Ricinus communis]
            gi|223547734|gb|EEF49226.1| multidrug
            resistance-associated protein, putative [Ricinus
            communis]
          Length = 1395

 Score =  423 bits (1088), Expect = e-116
 Identities = 210/292 (71%), Positives = 242/292 (82%)
 Frame = +3

Query: 105  QFYYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKAKECFLARFTEHVALYQRTS 284
            QF+YRSTSRELRRLDSVSRSPIYA+FTETLDG+STIRAFK+++CFLA+FTEHV LYQRTS
Sbjct: 991  QFFYRSTSRELRRLDSVSRSPIYATFTETLDGTSTIRAFKSEDCFLAKFTEHVGLYQRTS 1050

Query: 285  YTEITXXXXXXXXXXXXXXFVISFIAVMAVAGSRGGYPINFSTPGLVGLALSYAAPFVSL 464
            Y+E                F+ISF+AVMAV GSRG  PI+  TPGLVGLALSYAAP VSL
Sbjct: 1051 YSETIASLWLSLRLQLIAAFIISFVAVMAVVGSRGYLPISSGTPGLVGLALSYAAPIVSL 1110

Query: 465  LSSYLASFTETEKEMVSVERVLQYMDVPQEDIKGCIFVPPHWPFQGQIDFHHVTLRYMPS 644
            L S+L SFTETEKEMVSVER LQYMD+ QE+++G   + P WPFQG I+F +VT+RY PS
Sbjct: 1111 LGSFLTSFTETEKEMVSVERALQYMDISQEELEGSQSLGPDWPFQGLIEFQNVTMRYKPS 1170

Query: 645  LPSALQDVTFTVAGGTQVGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRD 824
            LP AL  VTFTVAGGTQVGI+GRTGAGKSS+LNALFRL+PI GG ILVD LN+ D+ +RD
Sbjct: 1171 LPPALDGVTFTVAGGTQVGIVGRTGAGKSSILNALFRLSPISGGCILVDGLNIIDVPVRD 1230

Query: 825  LRSHFSVVPQSPFLFEGSLRDNLDPYGTINDSMIWETLEKCHVKDEVEAAGG 980
            LR+HFSVVPQ+PFLFEGSLRDNLDP  T +D  IW TLE+CH+K+EVE AGG
Sbjct: 1231 LRAHFSVVPQTPFLFEGSLRDNLDPLQTSSDLKIWSTLEQCHIKEEVEMAGG 1282


>ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max]
          Length = 1384

 Score =  416 bits (1068), Expect = e-114
 Identities = 204/292 (69%), Positives = 238/292 (81%)
 Frame = +3

Query: 105  QFYYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKAKECFLARFTEHVALYQRTS 284
            QF+YRSTSRELRRLDSVSRSPIY SFTETLDGSSTIRAFKA++ F A+F EH+ LYQ+TS
Sbjct: 980  QFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKAEDFFFAKFIEHITLYQKTS 1039

Query: 285  YTEITXXXXXXXXXXXXXXFVISFIAVMAVAGSRGGYPINFSTPGLVGLALSYAAPFVSL 464
            YTEI               F++SFIAVMAV GS G  PINF TPGLVGLALSYAAP VSL
Sbjct: 1040 YTEIVASLWLSLRLQLLGAFIVSFIAVMAVVGSHGSLPINFGTPGLVGLALSYAAPIVSL 1099

Query: 465  LSSYLASFTETEKEMVSVERVLQYMDVPQEDIKGCIFVPPHWPFQGQIDFHHVTLRYMPS 644
            L S+L+SFTETEKEMVSVER LQYMD+PQE+  GC+++ P WP QG I+F  VTL+YMPS
Sbjct: 1100 LGSFLSSFTETEKEMVSVERALQYMDIPQEEQTGCLYLSPDWPNQGVIEFQSVTLKYMPS 1159

Query: 645  LPSALQDVTFTVAGGTQVGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRD 824
            LP+AL +++F + GGTQVGIIGRTGAGKSSVLNALFRLTPIC G I +D +++ +I +R+
Sbjct: 1160 LPAALCNLSFRIVGGTQVGIIGRTGAGKSSVLNALFRLTPICTGSITIDGVDIKNIPVRE 1219

Query: 825  LRSHFSVVPQSPFLFEGSLRDNLDPYGTINDSMIWETLEKCHVKDEVEAAGG 980
            LR+H ++VPQSPFLFEGSLRDNLDP    +D  IW  LEKCHVK+EVEAAGG
Sbjct: 1220 LRTHLAIVPQSPFLFEGSLRDNLDPLKMNDDLKIWNVLEKCHVKEEVEAAGG 1271


>ref|XP_002883764.1| ATMRP11 [Arabidopsis lyrata subsp. lyrata]
            gi|297329604|gb|EFH60023.1| ATMRP11 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1193

 Score =  402 bits (1033), Expect = e-110
 Identities = 199/292 (68%), Positives = 233/292 (79%)
 Frame = +3

Query: 105  QFYYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKAKECFLARFTEHVALYQRTS 284
            QF+YRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFK++E F+ARF EH+ LYQRTS
Sbjct: 790  QFFYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKSEEHFVARFIEHLTLYQRTS 849

Query: 285  YTEITXXXXXXXXXXXXXXFVISFIAVMAVAGSRGGYPINFSTPGLVGLALSYAAPFVSL 464
            Y+EI                ++ F+AVMAV GSRG +PI+F TPGLVGLALSYAAP VSL
Sbjct: 850  YSEIIASLWLSLRLQLLGAMIVLFVAVMAVLGSRGNFPISFGTPGLVGLALSYAAPLVSL 909

Query: 465  LSSYLASFTETEKEMVSVERVLQYMDVPQEDIKGCIFVPPHWPFQGQIDFHHVTLRYMPS 644
            L S+L SFTETEKEMVS+ERVLQYMDVPQE++ G   +   WP QG ++FH+VT+RY+ +
Sbjct: 910  LGSFLTSFTETEKEMVSIERVLQYMDVPQEEVSGRQSLSGKWPVQGLVEFHNVTMRYIST 969

Query: 645  LPSALQDVTFTVAGGTQVGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRD 824
            LP AL  ++FT+ GG  VG+IGRTGAGKSS+LNALFRLTP+C G ILVD +N+  + IR 
Sbjct: 970  LPPALNHISFTIQGGMHVGVIGRTGAGKSSILNALFRLTPVCNGEILVDGININHLPIRK 1029

Query: 825  LRSHFSVVPQSPFLFEGSLRDNLDPYGTINDSMIWETLEKCHVKDEVEAAGG 980
            LRSH +VVPQSPFLF+GSLRDNLDP G   D  IWE LEKC VK EVE+AGG
Sbjct: 1030 LRSHLAVVPQSPFLFQGSLRDNLDPLGLSEDWRIWEILEKCKVKAEVESAGG 1081


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