BLASTX nr result

ID: Coptis23_contig00021294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021294
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002438785.1| hypothetical protein SORBIDRAFT_10g026160 [S...    76   3e-12
tpg|DAA48022.1| TPA: putative cyclin-dependent protein kinase fa...    75   6e-12
ref|XP_002445888.1| hypothetical protein SORBIDRAFT_07g027490 [S...    75   6e-12
ref|NP_001145781.1| uncharacterized protein LOC100279288 [Zea ma...    75   6e-12
ref|NP_001062220.1| Os08g0512600 [Oryza sativa Japonica Group] g...    74   1e-11

>ref|XP_002438785.1| hypothetical protein SORBIDRAFT_10g026160 [Sorghum bicolor]
           gi|241917008|gb|EER90152.1| hypothetical protein
           SORBIDRAFT_10g026160 [Sorghum bicolor]
          Length = 325

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/80 (43%), Positives = 56/80 (70%)
 Frame = -1

Query: 245 RDMEEYEQIEKLGTGSFGSVFKM*KKGTNEFVAVKKIRVPKLKDENGIPINIFREIAVLK 66
           R M+ YE++EK+G G++G V+K  +K T   VA+KK R+P  +D+ G+P    RE+++L+
Sbjct: 22  RAMDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLP--EDDEGVPPTALREVSLLR 79

Query: 65  MLNDGQHIVRLLDTQTTINK 6
           ML+   H+VRLLD +  +NK
Sbjct: 80  MLSQDPHVVRLLDLKQGVNK 99


>tpg|DAA48022.1| TPA: putative cyclin-dependent protein kinase family protein [Zea
           mays]
          Length = 252

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/81 (41%), Positives = 57/81 (70%)
 Frame = -1

Query: 248 KRDMEEYEQIEKLGTGSFGSVFKM*KKGTNEFVAVKKIRVPKLKDENGIPINIFREIAVL 69
           +R M+ YE++EK+G G++G V++  +K T   VA+KK R+P  +D+ G+P    RE+++L
Sbjct: 24  QRAMDLYEKLEKVGEGTYGKVYRAREKATGRIVALKKTRLP--EDDEGVPPTAMREVSLL 81

Query: 68  KMLNDGQHIVRLLDTQTTINK 6
           +ML+   H+VRLLD +  +NK
Sbjct: 82  RMLSQDPHVVRLLDLKQGVNK 102


>ref|XP_002445888.1| hypothetical protein SORBIDRAFT_07g027490 [Sorghum bicolor]
           gi|241942238|gb|EES15383.1| hypothetical protein
           SORBIDRAFT_07g027490 [Sorghum bicolor]
          Length = 325

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/81 (41%), Positives = 57/81 (70%)
 Frame = -1

Query: 248 KRDMEEYEQIEKLGTGSFGSVFKM*KKGTNEFVAVKKIRVPKLKDENGIPINIFREIAVL 69
           +R M+ YE++EK+G G++G V++  +K T   VA+KK R+P  +D+ G+P    RE+++L
Sbjct: 21  QRAMDLYEKLEKVGEGTYGKVYRAREKATGRIVALKKTRLP--EDDEGVPPTAMREVSLL 78

Query: 68  KMLNDGQHIVRLLDTQTTINK 6
           +ML+   H+VRLLD +  +NK
Sbjct: 79  RMLSQDPHVVRLLDLKQGVNK 99


>ref|NP_001145781.1| uncharacterized protein LOC100279288 [Zea mays]
           gi|195621418|gb|ACG32539.1| cell division control
           protein 2 [Zea mays] gi|219884403|gb|ACL52576.1| unknown
           [Zea mays] gi|414869464|tpg|DAA48021.1| TPA: putative
           cyclin-dependent protein kinase family protein [Zea
           mays]
          Length = 329

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/81 (41%), Positives = 57/81 (70%)
 Frame = -1

Query: 248 KRDMEEYEQIEKLGTGSFGSVFKM*KKGTNEFVAVKKIRVPKLKDENGIPINIFREIAVL 69
           +R M+ YE++EK+G G++G V++  +K T   VA+KK R+P  +D+ G+P    RE+++L
Sbjct: 24  QRAMDLYEKLEKVGEGTYGKVYRAREKATGRIVALKKTRLP--EDDEGVPPTAMREVSLL 81

Query: 68  KMLNDGQHIVRLLDTQTTINK 6
           +ML+   H+VRLLD +  +NK
Sbjct: 82  RMLSQDPHVVRLLDLKQGVNK 102


>ref|NP_001062220.1| Os08g0512600 [Oryza sativa Japonica Group]
           gi|122222032|sp|Q0J4I1.1|CKB21_ORYSJ RecName:
           Full=Cyclin-dependent kinase B2-1; Short=CDKB2;1;
           Short=CDKB;2; AltName: Full=CDC2Os-3
           gi|113624189|dbj|BAF24134.1| Os08g0512600 [Oryza sativa
           Japonica Group] gi|218201442|gb|EEC83869.1| hypothetical
           protein OsI_29856 [Oryza sativa Indica Group]
           gi|222640853|gb|EEE68985.1| hypothetical protein
           OsJ_27911 [Oryza sativa Japonica Group]
          Length = 326

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/80 (43%), Positives = 55/80 (68%)
 Frame = -1

Query: 245 RDMEEYEQIEKLGTGSFGSVFKM*KKGTNEFVAVKKIRVPKLKDENGIPINIFREIAVLK 66
           R M+ YE++EK+G G++G V+K  +K T   VA+KK R+P  +D+ G+P    RE+++L+
Sbjct: 23  RAMDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLP--EDDEGVPPTALREVSLLR 80

Query: 65  MLNDGQHIVRLLDTQTTINK 6
           ML+   H+VRLLD +   NK
Sbjct: 81  MLSQDSHVVRLLDLKQGQNK 100


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