BLASTX nr result
ID: Coptis23_contig00021292
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021292 (857 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632283.1| PREDICTED: protein transport protein Sec24-l... 69 1e-09 ref|XP_002275292.1| PREDICTED: protein transport protein Sec24-l... 69 1e-09 emb|CAN62128.1| hypothetical protein VITISV_037581 [Vitis vinifera] 69 1e-09 ref|XP_002523817.1| expressed protein, putative [Ricinus communi... 69 1e-09 ref|XP_003632282.1| PREDICTED: protein transport protein Sec24-l... 69 2e-09 >ref|XP_003632283.1| PREDICTED: protein transport protein Sec24-like At3g07100 isoform 3 [Vitis vinifera] Length = 740 Score = 69.3 bits (168), Expect = 1e-09 Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 42/102 (41%) Frame = -3 Query: 564 SSYIDLTRTAMIFWFLSGPPDFEAGQLDTKRYGEQ------------------------- 460 S Y A +F FLSGPPD+ AGQLDT+RYGEQ Sbjct: 257 SEYGSTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAA 316 Query: 459 -----------------YTELTSFKFLSIESGGSLFLYANTD 385 YT+L S KFLSIESGGSLFLY+NTD Sbjct: 317 VAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 358 >ref|XP_002275292.1| PREDICTED: protein transport protein Sec24-like At3g07100 isoform 1 [Vitis vinifera] gi|296084904|emb|CBI28313.3| unnamed protein product [Vitis vinifera] Length = 744 Score = 69.3 bits (168), Expect = 1e-09 Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 42/102 (41%) Frame = -3 Query: 564 SSYIDLTRTAMIFWFLSGPPDFEAGQLDTKRYGEQ------------------------- 460 S Y A +F FLSGPPD+ AGQLDT+RYGEQ Sbjct: 261 SEYGSTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAA 320 Query: 459 -----------------YTELTSFKFLSIESGGSLFLYANTD 385 YT+L S KFLSIESGGSLFLY+NTD Sbjct: 321 VAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 362 >emb|CAN62128.1| hypothetical protein VITISV_037581 [Vitis vinifera] Length = 746 Score = 69.3 bits (168), Expect = 1e-09 Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 42/102 (41%) Frame = -3 Query: 564 SSYIDLTRTAMIFWFLSGPPDFEAGQLDTKRYGEQ------------------------- 460 S Y A +F FLSGPPD+ AGQLDT+RYGEQ Sbjct: 261 SEYGSTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAA 320 Query: 459 -----------------YTELTSFKFLSIESGGSLFLYANTD 385 YT+L S KFLSIESGGSLFLY+NTD Sbjct: 321 VAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 362 >ref|XP_002523817.1| expressed protein, putative [Ricinus communis] gi|223536905|gb|EEF38543.1| expressed protein, putative [Ricinus communis] Length = 740 Score = 68.9 bits (167), Expect = 1e-09 Identities = 42/102 (41%), Positives = 49/102 (48%), Gaps = 42/102 (41%) Frame = -3 Query: 564 SSYIDLTRTAMIFWFLSGPPDFEAGQLDTKRYGEQ------------------------- 460 S Y + A +F F+SGPPD+ AGQLDT+RYGEQ Sbjct: 257 SEYGNTFALARVFAFISGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAS 316 Query: 459 -----------------YTELTSFKFLSIESGGSLFLYANTD 385 YT+L S KFLSIESGGSLFLY+NTD Sbjct: 317 VAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 358 >ref|XP_003632282.1| PREDICTED: protein transport protein Sec24-like At3g07100 isoform 2 [Vitis vinifera] Length = 760 Score = 68.6 bits (166), Expect = 2e-09 Identities = 41/93 (44%), Positives = 46/93 (49%), Gaps = 42/93 (45%) Frame = -3 Query: 537 AMIFWFLSGPPDFEAGQLDTKRYGEQ---------------------------------- 460 A +F FLSGPPD+ AGQLDT+RYGEQ Sbjct: 286 ARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCV 345 Query: 459 --------YTELTSFKFLSIESGGSLFLYANTD 385 YT+L S KFLSIESGGSLFLY+NTD Sbjct: 346 DIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 378