BLASTX nr result

ID: Coptis23_contig00021292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021292
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632283.1| PREDICTED: protein transport protein Sec24-l...    69   1e-09
ref|XP_002275292.1| PREDICTED: protein transport protein Sec24-l...    69   1e-09
emb|CAN62128.1| hypothetical protein VITISV_037581 [Vitis vinifera]    69   1e-09
ref|XP_002523817.1| expressed protein, putative [Ricinus communi...    69   1e-09
ref|XP_003632282.1| PREDICTED: protein transport protein Sec24-l...    69   2e-09

>ref|XP_003632283.1| PREDICTED: protein transport protein Sec24-like At3g07100 isoform 3
           [Vitis vinifera]
          Length = 740

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 42/102 (41%)
 Frame = -3

Query: 564 SSYIDLTRTAMIFWFLSGPPDFEAGQLDTKRYGEQ------------------------- 460
           S Y      A +F FLSGPPD+ AGQLDT+RYGEQ                         
Sbjct: 257 SEYGSTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAA 316

Query: 459 -----------------YTELTSFKFLSIESGGSLFLYANTD 385
                            YT+L S KFLSIESGGSLFLY+NTD
Sbjct: 317 VAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 358


>ref|XP_002275292.1| PREDICTED: protein transport protein Sec24-like At3g07100 isoform 1
           [Vitis vinifera] gi|296084904|emb|CBI28313.3| unnamed
           protein product [Vitis vinifera]
          Length = 744

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 42/102 (41%)
 Frame = -3

Query: 564 SSYIDLTRTAMIFWFLSGPPDFEAGQLDTKRYGEQ------------------------- 460
           S Y      A +F FLSGPPD+ AGQLDT+RYGEQ                         
Sbjct: 261 SEYGSTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAA 320

Query: 459 -----------------YTELTSFKFLSIESGGSLFLYANTD 385
                            YT+L S KFLSIESGGSLFLY+NTD
Sbjct: 321 VAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 362


>emb|CAN62128.1| hypothetical protein VITISV_037581 [Vitis vinifera]
          Length = 746

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 42/102 (41%)
 Frame = -3

Query: 564 SSYIDLTRTAMIFWFLSGPPDFEAGQLDTKRYGEQ------------------------- 460
           S Y      A +F FLSGPPD+ AGQLDT+RYGEQ                         
Sbjct: 261 SEYGSTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAA 320

Query: 459 -----------------YTELTSFKFLSIESGGSLFLYANTD 385
                            YT+L S KFLSIESGGSLFLY+NTD
Sbjct: 321 VAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 362


>ref|XP_002523817.1| expressed protein, putative [Ricinus communis]
           gi|223536905|gb|EEF38543.1| expressed protein, putative
           [Ricinus communis]
          Length = 740

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 42/102 (41%), Positives = 49/102 (48%), Gaps = 42/102 (41%)
 Frame = -3

Query: 564 SSYIDLTRTAMIFWFLSGPPDFEAGQLDTKRYGEQ------------------------- 460
           S Y +    A +F F+SGPPD+ AGQLDT+RYGEQ                         
Sbjct: 257 SEYGNTFALARVFAFISGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAS 316

Query: 459 -----------------YTELTSFKFLSIESGGSLFLYANTD 385
                            YT+L S KFLSIESGGSLFLY+NTD
Sbjct: 317 VAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 358


>ref|XP_003632282.1| PREDICTED: protein transport protein Sec24-like At3g07100 isoform 2
           [Vitis vinifera]
          Length = 760

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 41/93 (44%), Positives = 46/93 (49%), Gaps = 42/93 (45%)
 Frame = -3

Query: 537 AMIFWFLSGPPDFEAGQLDTKRYGEQ---------------------------------- 460
           A +F FLSGPPD+ AGQLDT+RYGEQ                                  
Sbjct: 286 ARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCV 345

Query: 459 --------YTELTSFKFLSIESGGSLFLYANTD 385
                   YT+L S KFLSIESGGSLFLY+NTD
Sbjct: 346 DIFAVTNEYTDLASLKFLSIESGGSLFLYSNTD 378


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