BLASTX nr result
ID: Coptis23_contig00021288
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021288 (426 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264411.2| PREDICTED: uncharacterized protein LOC100241... 61 1e-07 ref|XP_002315695.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 gb|ABK95970.1| unknown [Populus trichocarpa] 55 6e-06 >ref|XP_002264411.2| PREDICTED: uncharacterized protein LOC100241600 [Vitis vinifera] Length = 408 Score = 60.8 bits (146), Expect = 1e-07 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Frame = +2 Query: 14 SDYQLNSKIERMKCVLNTLGPKLPDKGAKFCKNLQLYXXXXXXXXXXXXLKEAE-CRKST 190 +D++LN I R L +L PKLPDKGAK NLQ K+A+ C K T Sbjct: 58 TDHELNELITRQSSYLESLAPKLPDKGAKLRVNLQRLMDERERRKLCRVEKDADICEKPT 117 Query: 191 QSQTSDAC---NGSSSETPSPKDQSQSEFSKLFGKELDK-KPDCST 316 QS S C GS TPS + QS F+ + +D+ + DC T Sbjct: 118 QSHNSSFCGASEGSRQVTPSSQAHPQSSFASHLCRMMDENEADCRT 163 >ref|XP_002315695.1| predicted protein [Populus trichocarpa] gi|222864735|gb|EEF01866.1| predicted protein [Populus trichocarpa] Length = 264 Score = 55.1 bits (131), Expect = 6e-06 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Frame = +2 Query: 14 SDYQLNSKIERMKCVLNTLGPKLPDKGAKFCKNLQLY--XXXXXXXXXXXXLKEAECRKS 187 SD +L +IER K + LGP LPDKG K ++ + AEC K Sbjct: 56 SDKKLEEQIERNKIHVMKLGPTLPDKGQKLQLTIKAMEEELDQRKHRRPAQMDVAECEKH 115 Query: 188 TQSQTSDACNGSSSETPSPKDQSQSEFSKLFGKELDKKPDCSTHISVSLLHKGHPQSGGS 367 S S+ G + S S+S+FS +F +++++ DC + K G Sbjct: 116 RNSTASNGF-GQKDASSSQVKNSKSQFSTIFSRKMEENTDCRVG---NAFDKELTTLGHC 171 Query: 368 NHQNTISNGLLSTKRRK 418 N QN SNG KR++ Sbjct: 172 NRQNMRSNGRSGKKRKQ 188 >gb|ABK95970.1| unknown [Populus trichocarpa] Length = 264 Score = 55.1 bits (131), Expect = 6e-06 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Frame = +2 Query: 14 SDYQLNSKIERMKCVLNTLGPKLPDKGAKFCKNLQLY--XXXXXXXXXXXXLKEAECRKS 187 SD +L +IER K + LGP LPDKG K ++ + AEC K Sbjct: 56 SDKKLEEQIERNKIHVMKLGPTLPDKGQKLQLTIKAMEEELDQRKHRRPAQMDVAECEKH 115 Query: 188 TQSQTSDACNGSSSETPSPKDQSQSEFSKLFGKELDKKPDCSTHISVSLLHKGHPQSGGS 367 S S+ G + S S+S+FS +F +++++ DC + K G Sbjct: 116 RNSTASNGF-GQKDASSSQVKNSKSQFSTIFSRKMEENTDCRVG---NAFDKELTTLGHC 171 Query: 368 NHQNTISNGLLSTKRRK 418 N QN SNG KR++ Sbjct: 172 NRQNMRSNGRSGKKRKQ 188