BLASTX nr result

ID: Coptis23_contig00021288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021288
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264411.2| PREDICTED: uncharacterized protein LOC100241...    61   1e-07
ref|XP_002315695.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
gb|ABK95970.1| unknown [Populus trichocarpa]                           55   6e-06

>ref|XP_002264411.2| PREDICTED: uncharacterized protein LOC100241600 [Vitis vinifera]
          Length = 408

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
 Frame = +2

Query: 14  SDYQLNSKIERMKCVLNTLGPKLPDKGAKFCKNLQLYXXXXXXXXXXXXLKEAE-CRKST 190
           +D++LN  I R    L +L PKLPDKGAK   NLQ               K+A+ C K T
Sbjct: 58  TDHELNELITRQSSYLESLAPKLPDKGAKLRVNLQRLMDERERRKLCRVEKDADICEKPT 117

Query: 191 QSQTSDAC---NGSSSETPSPKDQSQSEFSKLFGKELDK-KPDCST 316
           QS  S  C    GS   TPS +   QS F+    + +D+ + DC T
Sbjct: 118 QSHNSSFCGASEGSRQVTPSSQAHPQSSFASHLCRMMDENEADCRT 163


>ref|XP_002315695.1| predicted protein [Populus trichocarpa] gi|222864735|gb|EEF01866.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
 Frame = +2

Query: 14  SDYQLNSKIERMKCVLNTLGPKLPDKGAKFCKNLQLY--XXXXXXXXXXXXLKEAECRKS 187
           SD +L  +IER K  +  LGP LPDKG K    ++                +  AEC K 
Sbjct: 56  SDKKLEEQIERNKIHVMKLGPTLPDKGQKLQLTIKAMEEELDQRKHRRPAQMDVAECEKH 115

Query: 188 TQSQTSDACNGSSSETPSPKDQSQSEFSKLFGKELDKKPDCSTHISVSLLHKGHPQSGGS 367
             S  S+   G    + S    S+S+FS +F +++++  DC      +   K     G  
Sbjct: 116 RNSTASNGF-GQKDASSSQVKNSKSQFSTIFSRKMEENTDCRVG---NAFDKELTTLGHC 171

Query: 368 NHQNTISNGLLSTKRRK 418
           N QN  SNG    KR++
Sbjct: 172 NRQNMRSNGRSGKKRKQ 188


>gb|ABK95970.1| unknown [Populus trichocarpa]
          Length = 264

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
 Frame = +2

Query: 14  SDYQLNSKIERMKCVLNTLGPKLPDKGAKFCKNLQLY--XXXXXXXXXXXXLKEAECRKS 187
           SD +L  +IER K  +  LGP LPDKG K    ++                +  AEC K 
Sbjct: 56  SDKKLEEQIERNKIHVMKLGPTLPDKGQKLQLTIKAMEEELDQRKHRRPAQMDVAECEKH 115

Query: 188 TQSQTSDACNGSSSETPSPKDQSQSEFSKLFGKELDKKPDCSTHISVSLLHKGHPQSGGS 367
             S  S+   G    + S    S+S+FS +F +++++  DC      +   K     G  
Sbjct: 116 RNSTASNGF-GQKDASSSQVKNSKSQFSTIFSRKMEENTDCRVG---NAFDKELTTLGHC 171

Query: 368 NHQNTISNGLLSTKRRK 418
           N QN  SNG    KR++
Sbjct: 172 NRQNMRSNGRSGKKRKQ 188


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