BLASTX nr result
ID: Coptis23_contig00021286
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00021286
(1681 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518298.1| telomerase reverse transcriptase, putative [... 273 4e-91
ref|XP_003545976.1| PREDICTED: telomerase reverse transcriptase-... 252 8e-87
ref|XP_003532879.1| PREDICTED: telomerase reverse transcriptase-... 254 2e-86
ref|XP_004161414.1| PREDICTED: LOW QUALITY PROTEIN: telomerase r... 242 3e-72
ref|XP_004149615.1| PREDICTED: telomerase reverse transcriptase-... 242 3e-72
>ref|XP_002518298.1| telomerase reverse transcriptase, putative [Ricinus communis]
gi|223542518|gb|EEF44058.1| telomerase reverse
transcriptase, putative [Ricinus communis]
Length = 1224
Score = 273 bits (697), Expect(2) = 4e-91
Identities = 145/264 (54%), Positives = 186/264 (70%), Gaps = 9/264 (3%)
Frame = +3
Query: 576 KLIWFSKVRFCPKENGTRVLANLKASSKFPIRSHLQ-----KSSHNTQSC----FKPVND 728
+L FSK+R PKENG R+L NLKA S+ ++ K+ ++S FKPVN
Sbjct: 662 RLFGFSKLRLRPKENGARMLVNLKAPSRMLVQESSSTGIPGKAQFVSKSVKYKHFKPVNY 721
Query: 729 VLRDLGAVLKGLKMKNPEKLGSSVFNYNDVYKKLCPFLSGLKSRSSTVPSVYIVVCDISK 908
VLRD AVLKG+ +K PEKLGSSVF+YND+Y+KL F+ LK+ ST+P+VYIVV D+SK
Sbjct: 722 VLRDTYAVLKGILVKEPEKLGSSVFDYNDIYRKLGLFIIDLKNGLSTIPNVYIVVSDVSK 781
Query: 909 AFDSVNQDKLLSVMKDVMLDEEYLLQFSSEVVCTKKCLWVHYGQKLLDPTMGTATMKSAP 1088
AFDSVNQD+LLSVMKD++ + EYLLQ SS+VVCTKK LWVH L+D +G K +
Sbjct: 782 AFDSVNQDQLLSVMKDILHENEYLLQQSSQVVCTKKSLWVHENLTLMDSEIGAGFTKKSS 841
Query: 1089 SVPFRVLHRVLTNQETSKMVWKAQLYQDLYQHVKWNMLLLEKQFYLQEVGIPQGSAVSSL 1268
S F LH VL NQ + + K ++ +LY+HVK N+L L+K FYLQ +GIPQGS +SSL
Sbjct: 842 SGRFGSLHSVLINQGLGRYMKKKEILFNLYEHVKCNVLQLDKTFYLQGIGIPQGSVLSSL 901
Query: 1269 LCSYYYAHMERNVIFPFLEKIQEP 1340
LCS YY H+ERNV+FPF+E + P
Sbjct: 902 LCSVYYGHLERNVLFPFIEITRGP 925
Score = 90.5 bits (223), Expect(2) = 4e-91
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +1
Query: 343 AILKNNLFSYWIYWLFSRLVVPIVQSSFYVTEVEGGKLDMFYYRKPTWKKMSSKGVTCLR 522
+++ +L WI+W FS LVVP++Q++FYVTE E GK D+FYYRKP W+K+ + +T L+
Sbjct: 584 SLVPPDLLEKWIFWFFSFLVVPLLQANFYVTESEHGKQDVFYYRKPIWEKLKNTTITGLK 643
Query: 523 EQNYCLLSDKSLSSILRKNSFGFRK 597
+QNY L + SI+ FGF K
Sbjct: 644 DQNYQHLDPSEVKSIIGNRLFGFSK 668
Score = 74.3 bits (181), Expect = 9e-11
Identities = 32/54 (59%), Positives = 43/54 (79%)
Frame = +2
Query: 1520 FISTSKEQATSFFTRLQRGFRDYSCFINESKSCMNFDLGELSGLPSKKMYMGDD 1681
FISTSK+QA SF+TRL RGFRDY+C++NE K C++F G LPS ++Y+G+D
Sbjct: 966 FISTSKKQAESFYTRLLRGFRDYNCYMNEEKFCLSFHSGHELALPSNRVYIGED 1019
>ref|XP_003545976.1| PREDICTED: telomerase reverse transcriptase-like [Glycine max]
Length = 1181
Score = 252 bits (644), Expect(2) = 8e-87
Identities = 139/276 (50%), Positives = 174/276 (63%), Gaps = 9/276 (3%)
Frame = +3
Query: 588 FSKVRFCPKENGTRVLANLKASSKFPIRSHLQKSSHNTQSCFKP---------VNDVLRD 740
FSK+R PKENG R++ANL+ SS+ P+ + + T+ K VN VL D
Sbjct: 629 FSKLRLQPKENGVRMVANLEGSSRIPLLHSMGVRNCKTKGKVKKHPKFKHYLSVNSVLCD 688
Query: 741 LGAVLKGLKMKNPEKLGSSVFNYNDVYKKLCPFLSGLKSRSSTVPSVYIVVCDISKAFDS 920
+LKG++ K P KLGSSVF+YNDVYKKLCPFL G K RS+++PS++IV CD+ KAFDS
Sbjct: 689 AHTILKGIQFKEPNKLGSSVFDYNDVYKKLCPFLVGQKKRSASMPSLFIVKCDVLKAFDS 748
Query: 921 VNQDKLLSVMKDVMLDEEYLLQFSSEVVCTKKCLWVHYGQKLLDPTMGTATMKSAPSVPF 1100
+NQDKLL +MKD +L + Y L+ +VVCTKK L V + D T + +S F
Sbjct: 749 INQDKLLDIMKDFLLKDVYFLKQYDQVVCTKKSLQVQKQFTMQDETSNNSHTQSTSFASF 808
Query: 1101 RVLHRVLTNQETSKMVWKAQLYQDLYQHVKWNMLLLEKQFYLQEVGIPQGSAVSSLLCSY 1280
H V NQE K V K LY DL QHVK N+L + +FYLQ VGIPQG +SSLLCS
Sbjct: 809 HSWHGVFVNQERWKSVKKKALYADLVQHVKRNVLQFDGKFYLQGVGIPQGGVLSSLLCSM 868
Query: 1281 YYAHMERNVIFPFLEKIQEPHTSKSAKTNLSGELIC 1388
YY H+ER+VIFPFLEK E S S N G+ C
Sbjct: 869 YYGHLERHVIFPFLEKTLE---SGSCIENNFGQTNC 901
Score = 96.7 bits (239), Expect(2) = 8e-87
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Frame = +1
Query: 25 FDHNFKHGRYCLKSQVVSFIWNVCRSIVPLELVGAPSNWRVLRKNISKFVHLRKFENFSL 204
F H + RYC +++++ C + L+ + L+ N+S +K+E F +
Sbjct: 446 FKHLIRRTRYCQHTKLLN---KHCVPSLDLDKNTIGRSSSRLKDNVSTTNVHKKYEEFGI 502
Query: 205 KQCMHGLKTSCVPLLSNWNSSCYMNNHAPETGEKLINNYQKFSEVMAI------------ 348
K C + T+ + ET + + Q S + A+
Sbjct: 503 KYCADTMDTT---------------DSQSETFKSYCSKSQVVSFIWAVSRSILPSELLVH 547
Query: 349 -LKNNLFSYWIYWLFSRLVVPIVQSSFYVTEVEGGKLDMFYYRKPTWKKMSSKGVTCLRE 525
+K L WI+W FS LVVP+V+++FYVTE E GK D++YYRK W+K+++ V+C ++
Sbjct: 548 GVKRKLLEKWIFWYFSFLVVPLVEANFYVTESEQGKQDIYYYRKSVWEKLAASTVSCFKD 607
Query: 526 QNYCLLSDKSLSSILRKNSFGFRK 597
Y L D ++ +IL+ FGF K
Sbjct: 608 WRYSYLDDVAVHNILKGRPFGFSK 631
Score = 66.2 bits (160), Expect = 2e-08
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +2
Query: 1520 FISTSKEQATSFFTRLQRGFRDYSCFINESKSCMNFDLGELSGLPSKKMYMGDD 1681
FISTSK+QA SFF+RL+RGFR Y+C++N K NFD+ S P ++Y+G+D
Sbjct: 921 FISTSKKQAASFFSRLERGFRGYNCYMNNKKFGANFDVEHTSDSPLNRVYVGED 974
>ref|XP_003532879.1| PREDICTED: telomerase reverse transcriptase-like [Glycine max]
Length = 1097
Score = 254 bits (648), Expect(2) = 2e-86
Identities = 133/260 (51%), Positives = 168/260 (64%), Gaps = 10/260 (3%)
Frame = +3
Query: 588 FSKVRFCPKENGTRVLANLKASSKFPI----------RSHLQKSSHNTQSCFKPVNDVLR 737
FSK+R PKENG R++ANLK SSK P+ ++ + +H+ + VN VLR
Sbjct: 546 FSKLRLQPKENGVRMVANLKGSSKMPLLMSTMGVRNWKTKGKVKNHSKYKHYPSVNSVLR 605
Query: 738 DLGAVLKGLKMKNPEKLGSSVFNYNDVYKKLCPFLSGLKSRSSTVPSVYIVVCDISKAFD 917
D +LKG++ K P KLGSSVF+YNDVYKKLCPFL G K S+++P+++IV D+ KAFD
Sbjct: 606 DAHTILKGIRFKEPNKLGSSVFDYNDVYKKLCPFLVGQKKGSASMPNLFIVKSDVMKAFD 665
Query: 918 SVNQDKLLSVMKDVMLDEEYLLQFSSEVVCTKKCLWVHYGQKLLDPTMGTATMKSAPSVP 1097
S+NQDKLL +MKD +L + Y L+ EVVCTKK LWV +LD T + +
Sbjct: 666 SINQDKLLDIMKDFLLKDVYFLKQYDEVVCTKKSLWVQKQFTMLDETRNNSDTQFTSFAS 725
Query: 1098 FRVLHRVLTNQETSKMVWKAQLYQDLYQHVKWNMLLLEKQFYLQEVGIPQGSAVSSLLCS 1277
F H V NQE V K L DL QHVK N+L +FYLQ+VGIPQG +SSLLCS
Sbjct: 726 FHSHHGVFVNQERWNTVKKKALNADLMQHVKRNVLQFNGKFYLQDVGIPQGGVLSSLLCS 785
Query: 1278 YYYAHMERNVIFPFLEKIQE 1337
YY H+ER+VIFPFLEK E
Sbjct: 786 MYYGHLERHVIFPFLEKTLE 805
Score = 94.0 bits (232), Expect(2) = 2e-86
Identities = 41/83 (49%), Positives = 57/83 (68%)
Frame = +1
Query: 349 LKNNLFSYWIYWLFSRLVVPIVQSSFYVTEVEGGKLDMFYYRKPTWKKMSSKGVTCLREQ 528
+K+ L WI+W FS LVVP+VQS+FYVTE E GK D++YY KP W+K+++ V C ++
Sbjct: 466 VKHKLLEKWIFWYFSFLVVPLVQSNFYVTESEQGKQDIYYYPKPVWEKLAASTVACFKDW 525
Query: 529 NYCLLSDKSLSSILRKNSFGFRK 597
Y L D ++ +ILR FGF K
Sbjct: 526 RYSCLDDVAVRNILRGRKFGFSK 548
Score = 66.6 bits (161), Expect = 2e-08
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +2
Query: 1520 FISTSKEQATSFFTRLQRGFRDYSCFINESKSCMNFDLGELSGLPSKKMYMGDD 1681
FISTSK+QA SFF+RL+RGFR Y+C +N+ K NFD+ +S P ++Y+G+D
Sbjct: 837 FISTSKKQAASFFSRLERGFRGYNCHMNKKKFGANFDVEHISDCPLNRVYVGED 890
>ref|XP_004161414.1| PREDICTED: LOW QUALITY PROTEIN: telomerase reverse transcriptase-like
[Cucumis sativus]
Length = 1146
Score = 242 bits (618), Expect(2) = 3e-72
Identities = 138/315 (43%), Positives = 188/315 (59%), Gaps = 14/315 (4%)
Frame = +3
Query: 507 CYLFERTELLFVE**ISIEYSKKKLIWFSKVRFCPKENGTRVLANLKASSKFPIRSHLQK 686
CYL E T + K + FSK+R CPKENG R+LANLKA SK P
Sbjct: 576 CYLNESTVR---------DILKNRSFGFSKLRLCPKENGVRILANLKAYSKMP------- 619
Query: 687 SSHNTQSC-------------FKPVNDVLRDLGAVLKGLKMKNPEKLGSSVFNYNDVYKK 827
+ N +SC +K VN+VLRD AVLKG+K+K PE LGSSVF+YNDVY+K
Sbjct: 620 -TENGESCGRFGGKKLVKFKYYKSVNNVLRDTHAVLKGIKLKEPELLGSSVFDYNDVYQK 678
Query: 828 LCPFLSGLKSRSSTVPSVYIVVCDISKAFDSVNQDKLLSVMKDVMLDEEYLLQFSSEVVC 1007
L FL +K +++P +++VV D+S AFDSV+QDKLL VMK +++ +EY L+ +++C
Sbjct: 679 LRLFLPSVKKAKASMPDLFLVVSDVSNAFDSVDQDKLLDVMKTIIVKDEYHLKQYHQILC 738
Query: 1008 TKKCLWVHYGQKLLDPTMGTATMKSAPSVPFRVLHRVLTNQETSKMVWKAQLYQDLYQHV 1187
TKK +W H L+DP + S FR LH VL NQE S V K + L++HV
Sbjct: 739 TKKTMWAHENVMLIDPNISPRFSSS----QFRSLHSVLVNQERSSFVNKNDFIRILHEHV 794
Query: 1188 KWNMLLLEKQFYLQEVGIPQGSAVSSLLCSYYYAHMERNVIFPFLEKIQEPHTSK-SAKT 1364
K N++ +K+FY+Q+ GI QGS +SS LCS Y+ +ER V+FPFL K+ ++ SA+
Sbjct: 795 KRNVMQFDKKFYIQKTGISQGSVLSSFLCSLYFGDLERKVLFPFLGKVIASRANEVSARQ 854
Query: 1365 NLSGELICQSNGPTE 1409
N I S+ E
Sbjct: 855 NRFDPSISPSSNVDE 869
Score = 58.2 bits (139), Expect(2) = 3e-72
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +2
Query: 1520 FISTSKEQATSFFTRLQRGFRDYSCFINESKSCMNFDLGELSGLPSKKMYMGDD 1681
FIS+SK+ A F R+ RGFR Y+C++NESK MNFD+ + SK++++G D
Sbjct: 887 FISSSKQLAEKFLCRVHRGFRAYNCYMNESKFGMNFDVANTYRIVSKRVHVGKD 940
Score = 86.7 bits (213), Expect = 2e-14
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = +1
Query: 373 WIYWLFSRLVVPIVQSSFYVTEVEGGKLDMFYYRKPTWKKMSSKGVTCLREQNYCLLSDK 552
WIYWLFS L++P++Q+ FYVTE E G+ D+ ++RK W+K++ T + + YC L++
Sbjct: 522 WIYWLFSHLIIPLIQAHFYVTETEFGRQDVXFFRKSIWEKLTKGATTSFKNKGYCYLNES 581
Query: 553 SLSSILRKNSFGFRK 597
++ IL+ SFGF K
Sbjct: 582 TVRDILKNRSFGFSK 596
>ref|XP_004149615.1| PREDICTED: telomerase reverse transcriptase-like [Cucumis sativus]
Length = 1146
Score = 242 bits (618), Expect(2) = 3e-72
Identities = 138/315 (43%), Positives = 188/315 (59%), Gaps = 14/315 (4%)
Frame = +3
Query: 507 CYLFERTELLFVE**ISIEYSKKKLIWFSKVRFCPKENGTRVLANLKASSKFPIRSHLQK 686
CYL E T + K + FSK+R CPKENG R+LANLKA SK P
Sbjct: 576 CYLNESTVR---------DILKNRSFGFSKLRLCPKENGVRILANLKAYSKMP------- 619
Query: 687 SSHNTQSC-------------FKPVNDVLRDLGAVLKGLKMKNPEKLGSSVFNYNDVYKK 827
+ N +SC +K VN+VLRD AVLKG+K+K PE LGSSVF+YNDVY+K
Sbjct: 620 -TENGESCGRFGGKKLVKFKYYKSVNNVLRDTHAVLKGIKLKEPELLGSSVFDYNDVYQK 678
Query: 828 LCPFLSGLKSRSSTVPSVYIVVCDISKAFDSVNQDKLLSVMKDVMLDEEYLLQFSSEVVC 1007
L FL +K +++P +++VV D+S AFDSV+QDKLL VMK +++ +EY L+ +++C
Sbjct: 679 LRLFLPSVKKAKASMPDLFLVVSDVSNAFDSVDQDKLLDVMKTIIVKDEYHLKQYHQILC 738
Query: 1008 TKKCLWVHYGQKLLDPTMGTATMKSAPSVPFRVLHRVLTNQETSKMVWKAQLYQDLYQHV 1187
TKK +W H L+DP + S FR LH VL NQE S V K + L++HV
Sbjct: 739 TKKTMWAHENVMLIDPNISPRFSSS----QFRSLHSVLVNQERSSFVNKNDFIRILHEHV 794
Query: 1188 KWNMLLLEKQFYLQEVGIPQGSAVSSLLCSYYYAHMERNVIFPFLEKIQEPHTSK-SAKT 1364
K N++ +K+FY+Q+ GI QGS +SS LCS Y+ +ER V+FPFL K+ ++ SA+
Sbjct: 795 KRNVMQFDKKFYIQKTGISQGSVLSSFLCSLYFGDLERKVLFPFLGKVIASRANEVSARQ 854
Query: 1365 NLSGELICQSNGPTE 1409
N I S+ E
Sbjct: 855 NRFDPSISPSSNVDE 869
Score = 58.2 bits (139), Expect(2) = 3e-72
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +2
Query: 1520 FISTSKEQATSFFTRLQRGFRDYSCFINESKSCMNFDLGELSGLPSKKMYMGDD 1681
FIS+SK+ A F R+ RGFR Y+C++NESK MNFD+ + SK++++G D
Sbjct: 887 FISSSKQLAEKFLCRVHRGFRAYNCYMNESKFGMNFDVANTYRIVSKRVHVGKD 940
Score = 88.2 bits (217), Expect = 6e-15
Identities = 33/75 (44%), Positives = 53/75 (70%)
Frame = +1
Query: 373 WIYWLFSRLVVPIVQSSFYVTEVEGGKLDMFYYRKPTWKKMSSKGVTCLREQNYCLLSDK 552
WIYWLFS L++P++Q+ FYVTE E G+ D++++RK W+K++ T + + YC L++
Sbjct: 522 WIYWLFSHLIIPLIQAHFYVTETEFGRQDVYFFRKSIWEKLTKGATTSFKNKGYCYLNES 581
Query: 553 SLSSILRKNSFGFRK 597
++ IL+ SFGF K
Sbjct: 582 TVRDILKNRSFGFSK 596