BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021280
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306950.1| predicted protein [Populus trichocarpa] gi|1...    66   5e-09
emb|CCG34082.1| SCF ubiquitin ligase [uncultured eukaryote]            65   6e-09
ref|NP_001063805.2| Os09g0539500 [Oryza sativa Japonica Group] g...    65   6e-09
emb|CCG34083.1| SCF ubiquitin ligase [uncultured eukaryote]            64   2e-08
ref|XP_002976912.1| hypothetical protein SELMODRAFT_271223 [Sela...    64   2e-08

>ref|XP_002306950.1| predicted protein [Populus trichocarpa] gi|118487452|gb|ABK95554.1|
           unknown [Populus trichocarpa]
           gi|222856399|gb|EEE93946.1| predicted protein [Populus
           trichocarpa]
          Length = 157

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = -3

Query: 378 AANDLNMQNLIEVAAQRVADTIKGKTVYKIREKFNIKNDFTLEEFEEALKKKPGVFE 208
           AAN LN++NL+++  QRVAD IKGKT  +IR+ FNIKNDFT EE EE  ++    FE
Sbjct: 101 AANYLNIKNLLDLTCQRVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>emb|CCG34082.1| SCF ubiquitin ligase [uncultured eukaryote]
          Length = 158

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 33/57 (57%), Positives = 41/57 (71%)
 Frame = -3

Query: 378 AANDLNMQNLIEVAAQRVADTIKGKTVYKIREKFNIKNDFTLEEFEEALKKKPGVFE 208
           AAN LN++NL+++  Q VAD IKGKT   IR+ FNIKNDFT EE EE  ++ P  FE
Sbjct: 102 AANYLNIKNLLDLTCQTVADMIKGKTPEGIRKTFNIKNDFTPEEEEEVRRENPWAFE 158


>ref|NP_001063805.2| Os09g0539500 [Oryza sativa Japonica Group]
           gi|255679097|dbj|BAF25719.2| Os09g0539500 [Oryza sativa
           Japonica Group]
          Length = 79

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 34/61 (55%), Positives = 43/61 (70%)
 Frame = -3

Query: 390 FVPQAANDLNMQNLIEVAAQRVADTIKGKTVYKIREKFNIKNDFTLEEFEEALKKKPGVF 211
           FV QAAN LN++ L+++  Q VAD IKGKT  +IR+ FNIKNDFT EE EE  ++    F
Sbjct: 19  FVFQAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAF 78

Query: 210 E 208
           E
Sbjct: 79  E 79


>emb|CCG34083.1| SCF ubiquitin ligase [uncultured eukaryote]
          Length = 158

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = -3

Query: 378 AANDLNMQNLIEVAAQRVADTIKGKTVYKIREKFNIKNDFTLEEFEEALKKKPGVFE 208
           AAN LN++NL+++  Q VAD IKGKT  +IR+ FNIKNDFT EE EE  ++    FE
Sbjct: 102 AANYLNIKNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 158


>ref|XP_002976912.1| hypothetical protein SELMODRAFT_271223 [Selaginella moellendorffii]
           gi|302797745|ref|XP_002980633.1| hypothetical protein
           SELMODRAFT_154042 [Selaginella moellendorffii]
           gi|300151639|gb|EFJ18284.1| hypothetical protein
           SELMODRAFT_154042 [Selaginella moellendorffii]
           gi|300155390|gb|EFJ22022.1| hypothetical protein
           SELMODRAFT_271223 [Selaginella moellendorffii]
          Length = 157

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = -3

Query: 378 AANDLNMQNLIEVAAQRVADTIKGKTVYKIREKFNIKNDFTLEEFEEALKKKPGVFE 208
           AAN LN++NL+++  Q VAD IKGKT  +IR+ FNIKNDFT EE EE  ++    FE
Sbjct: 101 AANYLNIRNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157