BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021268
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23113.3| unnamed protein product [Vitis vinifera]              317   1e-84
gb|AFW68427.1| hypothetical protein ZEAMMB73_052095 [Zea mays]        279   4e-73
gb|AFW68425.1| hypothetical protein ZEAMMB73_052095 [Zea mays] g...   279   4e-73
ref|NP_001168465.1| uncharacterized protein LOC100382240 [Zea ma...   279   4e-73
gb|AAM94926.1| putative DNA mismatch repair protein [Oryza sativ...   277   2e-72

>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  317 bits (813), Expect = 1e-84
 Identities = 165/262 (62%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
 Frame = -1

Query: 783  VLLRITEKMRKDLEEICDLLNTVIQLDMVIARAKYSVSFGGTFPDLLLTKDKDGYFGVEY 604
            VLL++TEKM+ DLE+I  LL++VIQLD++ ARA Y +SFGGT PDL L ++K+G      
Sbjct: 281  VLLKLTEKMQMDLEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGS-STGA 339

Query: 603  HTSGAKTSNDDLT-QKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIADIRRRKLQPE 427
            H SG  TS      ++EW L+LP AYHP         L+KARK+V+ AI++ RR+KLQ E
Sbjct: 340  HLSGHGTSEASYPIKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAISEQRRKKLQGE 399

Query: 426  NNSLKEEPDVNIEYLKMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGL 247
              ++KEE D+N+  L+M+V +LE++ P+PVDFF+  +TRVL+ITGPNTGGKTICLKT+GL
Sbjct: 400  KFNVKEETDINLSSLEMQVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGL 459

Query: 246  AAMMAKSGLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQS 67
            AAMMA+SGL+VL++EPVRIPWFD +F+DIGDEQSLS SLSTFSGHL+QI  I+A ST QS
Sbjct: 460  AAMMARSGLHVLAAEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQS 519

Query: 66   LVLLDEVGGGTNPLEGAALGMS 1
            LVLLDEVG GTNPLEGAALGMS
Sbjct: 520  LVLLDEVGAGTNPLEGAALGMS 541


>gb|AFW68427.1| hypothetical protein ZEAMMB73_052095 [Zea mays]
          Length = 864

 Score =  279 bits (714), Expect = 4e-73
 Identities = 139/261 (53%), Positives = 197/261 (75%)
 Frame = -1

Query: 783  VLLRITEKMRKDLEEICDLLNTVIQLDMVIARAKYSVSFGGTFPDLLLTKDKDGYFGVEY 604
            VL ++T+K+R DL+ I +LL   I+LD + ARAKYS+++ GTFPDL L   ++       
Sbjct: 299  VLSKLTDKIRLDLDSIQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSAT 358

Query: 603  HTSGAKTSNDDLTQKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIADIRRRKLQPEN 424
              S  + S+  L +K W LY+PNAYHP         + +A+++V +A A+IRRR++  ++
Sbjct: 359  GGSIKQISSAQLPKKAWKLYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQD 418

Query: 423  NSLKEEPDVNIEYLKMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLA 244
             + +++   +++ +K+ V++LEK  P+PVDF +  +T VL+ITGPNTGGKTI LKT+GLA
Sbjct: 419  IAEEDQLASDLDSMKLRVSQLEKDQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLA 478

Query: 243  AMMAKSGLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSL 64
            ++MAK GLY+L+SEPV+IPWF+++++DIGDEQSL+ SLSTFSGHL+QIGAI+A ST +SL
Sbjct: 479  SLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESL 538

Query: 63   VLLDEVGGGTNPLEGAALGMS 1
            VLLDEVG GTNPLEGAALGMS
Sbjct: 539  VLLDEVGAGTNPLEGAALGMS 559


>gb|AFW68425.1| hypothetical protein ZEAMMB73_052095 [Zea mays]
            gi|413933875|gb|AFW68426.1| hypothetical protein
            ZEAMMB73_052095 [Zea mays]
          Length = 587

 Score =  279 bits (714), Expect = 4e-73
 Identities = 139/261 (53%), Positives = 197/261 (75%)
 Frame = -1

Query: 783  VLLRITEKMRKDLEEICDLLNTVIQLDMVIARAKYSVSFGGTFPDLLLTKDKDGYFGVEY 604
            VL ++T+K+R DL+ I +LL   I+LD + ARAKYS+++ GTFPDL L   ++       
Sbjct: 299  VLSKLTDKIRLDLDSIQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSAT 358

Query: 603  HTSGAKTSNDDLTQKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIADIRRRKLQPEN 424
              S  + S+  L +K W LY+PNAYHP         + +A+++V +A A+IRRR++  ++
Sbjct: 359  GGSIKQISSAQLPKKAWKLYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQD 418

Query: 423  NSLKEEPDVNIEYLKMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLA 244
             + +++   +++ +K+ V++LEK  P+PVDF +  +T VL+ITGPNTGGKTI LKT+GLA
Sbjct: 419  IAEEDQLASDLDSMKLRVSQLEKDQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLA 478

Query: 243  AMMAKSGLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSL 64
            ++MAK GLY+L+SEPV+IPWF+++++DIGDEQSL+ SLSTFSGHL+QIGAI+A ST +SL
Sbjct: 479  SLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESL 538

Query: 63   VLLDEVGGGTNPLEGAALGMS 1
            VLLDEVG GTNPLEGAALGMS
Sbjct: 539  VLLDEVGAGTNPLEGAALGMS 559


>ref|NP_001168465.1| uncharacterized protein LOC100382240 [Zea mays]
            gi|223948449|gb|ACN28308.1| unknown [Zea mays]
          Length = 689

 Score =  279 bits (714), Expect = 4e-73
 Identities = 139/261 (53%), Positives = 197/261 (75%)
 Frame = -1

Query: 783  VLLRITEKMRKDLEEICDLLNTVIQLDMVIARAKYSVSFGGTFPDLLLTKDKDGYFGVEY 604
            VL ++T+K+R DL+ I +LL   I+LD + ARAKYS+++ GTFPDL L   ++       
Sbjct: 300  VLSKLTDKIRLDLDSIQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSAT 359

Query: 603  HTSGAKTSNDDLTQKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIADIRRRKLQPEN 424
              S  + S+  L +K W LY+PNAYHP         + +A+++V +A A+IRRR++  ++
Sbjct: 360  GGSIKQISSAQLPKKAWKLYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQD 419

Query: 423  NSLKEEPDVNIEYLKMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLA 244
             + +++   +++ +K+ V++LEK  P+PVDF +  +T VL+ITGPNTGGKTI LKT+GLA
Sbjct: 420  IAEEDQLASDLDSMKLRVSQLEKDQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLA 479

Query: 243  AMMAKSGLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSL 64
            ++MAK GLY+L+SEPV+IPWF+++++DIGDEQSL+ SLSTFSGHL+QIGAI+A ST +SL
Sbjct: 480  SLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESL 539

Query: 63   VLLDEVGGGTNPLEGAALGMS 1
            VLLDEVG GTNPLEGAALGMS
Sbjct: 540  VLLDEVGAGTNPLEGAALGMS 560


>gb|AAM94926.1| putative DNA mismatch repair protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  277 bits (708), Expect = 2e-72
 Identities = 139/260 (53%), Positives = 194/260 (74%)
 Frame = -1

Query: 780  LLRITEKMRKDLEEICDLLNTVIQLDMVIARAKYSVSFGGTFPDLLLTKDKDGYFGVEYH 601
            L ++T+K+  +L+ I  LL   ++LD V ARAKYS+++ GT+PDL L    +G       
Sbjct: 271  LSKMTDKILLELDNIRILLQATVELDKVAARAKYSIAYDGTYPDLYLPNFVNGTVSTATG 330

Query: 600  TSGAKTSNDDLTQKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIADIRRRKLQPENN 421
             S +  S+  L++K W L +PNAYHP         L +A+K+V +A A+IRRR++  ++N
Sbjct: 331  GSISTISSAHLSKKAWKLCMPNAYHPLLLQQHQENLHRAKKDVASATAEIRRRRIYGQDN 390

Query: 420  SLKEEPDVNIEYLKMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLAA 241
              +++   +++ +K+ V+++EK  P+PVDFF+   T VL+ITGPNTGGKTI LKT+GLA+
Sbjct: 391  VEEDQLASDLDLMKIRVSQMEKDRPVPVDFFIAEGTTVLVITGPNTGGKTISLKTVGLAS 450

Query: 240  MMAKSGLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSLV 61
            +MAK GLY+L+SEPV+IPWF+++++DIGDEQSL+ SLSTFSGHL+QIGAI+A ST QSLV
Sbjct: 451  LMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAWSTSQSLV 510

Query: 60   LLDEVGGGTNPLEGAALGMS 1
            LLDEVG GTNPLEGAALGMS
Sbjct: 511  LLDEVGAGTNPLEGAALGMS 530