BLASTX nr result

ID: Coptis23_contig00021267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021267
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544551.1| PREDICTED: peroxisome biogenesis factor 10-l...   200   1e-57
emb|CAN71793.1| hypothetical protein VITISV_022107 [Vitis vinifera]   191   5e-57
ref|XP_002279784.2| PREDICTED: peroxisome biogenesis factor 10-l...   191   5e-57
ref|XP_003550258.1| PREDICTED: peroxisome biogenesis factor 10-l...   199   5e-57
ref|XP_004141339.1| PREDICTED: peroxisome biogenesis factor 10-l...   185   5e-54

>ref|XP_003544551.1| PREDICTED: peroxisome biogenesis factor 10-like [Glycine max]
          Length = 394

 Score =  200 bits (508), Expect(2) = 1e-57
 Identities = 97/128 (75%), Positives = 107/128 (83%)
 Frame = +1

Query: 40  MGRHGHEDVLHXXXXXXXXXXXXXXXEGRRFPLAAQPEVMRAAEKDDQYASYIYDACRDA 219
           +GRHG + V                 E RRFPLAAQPE+MRAAEKDDQYAS++Y+ACRDA
Sbjct: 6   LGRHGSDSV-----DGAVAGPSTSATEPRRFPLAAQPEMMRAAEKDDQYASFVYEACRDA 60

Query: 220 FRHIFGTRVSVAYQNETKLLGQMLYYVITTGSGQQTLGEEYCDITQVAGPYGLPPTPARR 399
           FRH+FGTRV+VAYQNETKLLGQMLYYV+TTGSGQQTLGEEYCDITQVAGPYGLPPTPARR
Sbjct: 61  FRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPYGLPPTPARR 120

Query: 400 ALFIVYHT 423
           ALF+VY T
Sbjct: 121 ALFVVYQT 128



 Score = 49.3 bits (116), Expect(2) = 1e-57
 Identities = 21/35 (60%), Positives = 29/35 (82%)
 Frame = +2

Query: 470 YHTAVPYLAERISSRVAARGIILSDSHSNNLYGDN 574
           Y TA+PY+AERISSR+A+RGI+L+D  S   +G+N
Sbjct: 126 YQTAIPYIAERISSRIASRGIVLADYESAEGFGEN 160


>emb|CAN71793.1| hypothetical protein VITISV_022107 [Vitis vinifera]
          Length = 1334

 Score =  191 bits (486), Expect(2) = 5e-57
 Identities = 88/100 (88%), Positives = 98/100 (98%)
 Frame = +1

Query: 124 RRFPLAAQPEVMRAAEKDDQYASYIYDACRDAFRHIFGTRVSVAYQNETKLLGQMLYYVI 303
           RRFPLAAQPE+MRAAEKDDQYAS++Y+ACRDAFRH+FGTRV+VAYQ+ETKLLGQMLYY++
Sbjct: 33  RRFPLAAQPEIMRAAEKDDQYASHVYEACRDAFRHLFGTRVAVAYQSETKLLGQMLYYIL 92

Query: 304 TTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVYHT 423
           TTGSGQQTLGEEYCDITQVAGPYGL PTPARRALFI+Y T
Sbjct: 93  TTGSGQQTLGEEYCDITQVAGPYGLSPTPARRALFILYQT 132



 Score = 55.8 bits (133), Expect(2) = 5e-57
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = +2

Query: 470 YHTAVPYLAERISSRVAARGIILSDSHSNNLYGDNTDVRNQV 595
           Y TAVPY+AER+SSRVAARGI ++D+ ++ LYG+N    +QV
Sbjct: 130 YQTAVPYIAERVSSRVAARGIAIADAQADELYGNNVPGSSQV 171


>ref|XP_002279784.2| PREDICTED: peroxisome biogenesis factor 10-like [Vitis vinifera]
           gi|296081704|emb|CBI20709.3| unnamed protein product
           [Vitis vinifera]
          Length = 400

 Score =  191 bits (486), Expect(2) = 5e-57
 Identities = 88/100 (88%), Positives = 98/100 (98%)
 Frame = +1

Query: 124 RRFPLAAQPEVMRAAEKDDQYASYIYDACRDAFRHIFGTRVSVAYQNETKLLGQMLYYVI 303
           RRFPLAAQPE+MRAAEKDDQYAS++Y+ACRDAFRH+FGTRV+VAYQ+ETKLLGQMLYY++
Sbjct: 33  RRFPLAAQPEIMRAAEKDDQYASHVYEACRDAFRHLFGTRVAVAYQSETKLLGQMLYYIL 92

Query: 304 TTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVYHT 423
           TTGSGQQTLGEEYCDITQVAGPYGL PTPARRALFI+Y T
Sbjct: 93  TTGSGQQTLGEEYCDITQVAGPYGLSPTPARRALFILYQT 132



 Score = 55.8 bits (133), Expect(2) = 5e-57
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = +2

Query: 470 YHTAVPYLAERISSRVAARGIILSDSHSNNLYGDNTDVRNQV 595
           Y TAVPY+AER+SSRVAARGI ++D+ ++ LYG+N    +QV
Sbjct: 130 YQTAVPYIAERVSSRVAARGIAIADAQADELYGNNVPGSSQV 171


>ref|XP_003550258.1| PREDICTED: peroxisome biogenesis factor 10-like [Glycine max]
          Length = 394

 Score =  199 bits (507), Expect(2) = 5e-57
 Identities = 93/102 (91%), Positives = 100/102 (98%)
 Frame = +1

Query: 118 EGRRFPLAAQPEVMRAAEKDDQYASYIYDACRDAFRHIFGTRVSVAYQNETKLLGQMLYY 297
           E RRFPLAAQPE+MRAAEKDDQYAS++Y+ACRDAFRH+FGTRV+VAYQNETKLLGQMLYY
Sbjct: 27  EPRRFPLAAQPEIMRAAEKDDQYASFVYEACRDAFRHLFGTRVAVAYQNETKLLGQMLYY 86

Query: 298 VITTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVYHT 423
           V+TTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVY T
Sbjct: 87  VLTTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVYQT 128



 Score = 47.8 bits (112), Expect(2) = 5e-57
 Identities = 20/35 (57%), Positives = 29/35 (82%)
 Frame = +2

Query: 470 YHTAVPYLAERISSRVAARGIILSDSHSNNLYGDN 574
           Y TA+PY+AERISSR+A++GI+L+DS     +G+N
Sbjct: 126 YQTAIPYIAERISSRIASQGIVLTDSEFAEGFGEN 160


>ref|XP_004141339.1| PREDICTED: peroxisome biogenesis factor 10-like [Cucumis sativus]
          Length = 397

 Score =  185 bits (469), Expect(2) = 5e-54
 Identities = 85/99 (85%), Positives = 94/99 (94%)
 Frame = +1

Query: 127 RFPLAAQPEVMRAAEKDDQYASYIYDACRDAFRHIFGTRVSVAYQNETKLLGQMLYYVIT 306
           RFPLAAQPE+MRAAEKDDQYAS++YDACRDAFRH+FG R++VAYQ+ETKLLGQMLYYV+T
Sbjct: 31  RFPLAAQPEIMRAAEKDDQYASFVYDACRDAFRHLFGARLAVAYQSETKLLGQMLYYVLT 90

Query: 307 TGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVYHT 423
           TGSGQQTLGEEYCDI QV+GPYGL P PARRALFIVY T
Sbjct: 91  TGSGQQTLGEEYCDINQVSGPYGLSPNPARRALFIVYQT 129



 Score = 52.4 bits (124), Expect(2) = 5e-54
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +2

Query: 470 YHTAVPYLAERISSRVAARGIILSDSHSNNLYGD 571
           Y TAVPY+AERISSRVA+RGI+L+DS S+  YG+
Sbjct: 127 YQTAVPYIAERISSRVASRGIMLADSLSDEFYGE 160


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