BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021253
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis v...   224   2e-56
ref|XP_002332160.1| predicted protein [Populus trichocarpa] gi|2...   222   6e-56
ref|XP_002336372.1| predicted protein [Populus trichocarpa] gi|2...   220   3e-55
ref|XP_003527412.1| PREDICTED: 50S ribosomal protein L9-like iso...   219   5e-55
gb|ACU17789.1| unknown [Glycine max]                                  219   5e-55

>ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis vinifera]
           gi|302143920|emb|CBI23025.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  224 bits (571), Expect = 2e-56
 Identities = 118/221 (53%), Positives = 161/221 (72%), Gaps = 7/221 (3%)
 Frame = +2

Query: 35  MANLKTGTRNVLRQLIKTHHNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKA 214
           MA ++ G RN+LR ++K   + Q  D + +P   + QG+RY+  KLEVILTT+IDKLGKA
Sbjct: 1   MAYMQYG-RNILRHIVKDVGS-QCSDRVVNPLLYVCQGVRYR--KLEVILTTNIDKLGKA 56

Query: 215 GETVKVAPGYFRNYLMPNILAVPNIAKYDFIMREQRKLYQRQEVEVVKEVPQAKQDTIKE 394
           GETVKVAPGYFRN+LMP +LAVPNI K+ +++ EQRKLYQ +EVE VKEV + ++D +KE
Sbjct: 57  GETVKVAPGYFRNHLMPKLLAVPNIEKFAYLISEQRKLYQPEEVEEVKEVVETEEDKMKE 116

Query: 395 FEQAANRLEKANLVLRRMVK-------SSSDLNELRSPVTKEELLAEVSRQLCVNIGPEN 553
           +  AA RLE   +  RR +K          +  ELRSP+TK++L+AEV+RQL V + PE+
Sbjct: 117 YHTAAKRLETTRVAFRRFIKFEKGQPVRKGEPLELRSPITKDDLVAEVARQLSVQVEPES 176

Query: 554 LHLPASISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 676
           LHLP+ ++  G++++ L  PK+I LPEGKV+WTL VKIR K
Sbjct: 177 LHLPSPLTHVGEFEVPLRLPKSIPLPEGKVRWTLKVKIRCK 217


>ref|XP_002332160.1| predicted protein [Populus trichocarpa] gi|222875210|gb|EEF12341.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  222 bits (566), Expect = 6e-56
 Identities = 115/215 (53%), Positives = 154/215 (71%), Gaps = 8/215 (3%)
 Frame = +2

Query: 56  TRNVLRQLIKTHHNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKAGETVKVA 235
           +RN LR+++    N+++ D   HP     QG+RYK  KLEVILTTSI+KLGKAG+TVKVA
Sbjct: 7   SRNALRRIVAKETNLKSSDGAIHPLLYACQGVRYK--KLEVILTTSIEKLGKAGQTVKVA 64

Query: 236 PGYFRNYLMPNILAVPNIAKYDFIMREQRKLYQRQEVEVVKEVPQAKQDTIKEFEQAANR 415
           PG+FRN+LMP +LAVPNI K+  ++REQRK+YQ +E E VK V +  +D +KE+E AA R
Sbjct: 65  PGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETMEDKMKEYETAAKR 124

Query: 416 LEKANLVLR--------RMVKSSSDLNELRSPVTKEELLAEVSRQLCVNIGPENLHLPAS 571
           L KA L  R        R  +S  D  E+ SPVTK+++L EV+RQ  V I P+N+HLP+ 
Sbjct: 125 LVKAQLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFNVQIEPDNVHLPSP 184

Query: 572 ISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 676
           +++ G++++ L FPK+I LPEGKVKWTL VKIR K
Sbjct: 185 LTALGEFEVPLRFPKSIPLPEGKVKWTLKVKIRGK 219


>ref|XP_002336372.1| predicted protein [Populus trichocarpa] gi|222834835|gb|EEE73284.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  220 bits (560), Expect = 3e-55
 Identities = 114/215 (53%), Positives = 154/215 (71%), Gaps = 8/215 (3%)
 Frame = +2

Query: 56  TRNVLRQLIKTHHNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKAGETVKVA 235
           +RN LR++I    ++++ D   HP     QG+RYK  KLEVILTTSI+KLGKAG+TVKVA
Sbjct: 7   SRNALRRIIAKETSLKSSDGAIHPLLYACQGVRYK--KLEVILTTSIEKLGKAGQTVKVA 64

Query: 236 PGYFRNYLMPNILAVPNIAKYDFIMREQRKLYQRQEVEVVKEVPQAKQDTIKEFEQAANR 415
           PG+FRN+LMP +LAVPNI K+  ++REQRK+YQ +E E VK V +  +D +KE+E AA R
Sbjct: 65  PGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETMEDKMKEYETAAKR 124

Query: 416 LEKANLVLR--------RMVKSSSDLNELRSPVTKEELLAEVSRQLCVNIGPENLHLPAS 571
           L KA L  R        R  +S  D  E+ SPVTK+++L EV+RQ  V I P+N+HLP+ 
Sbjct: 125 LVKARLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFNVQIEPDNVHLPSP 184

Query: 572 ISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 676
           +++ G++++ L FPK+I +PEGKVKWTL VKIR K
Sbjct: 185 LTALGEFEVPLRFPKSIPMPEGKVKWTLKVKIRGK 219


>ref|XP_003527412.1| PREDICTED: 50S ribosomal protein L9-like isoform 1 [Glycine max]
           gi|356517476|ref|XP_003527413.1| PREDICTED: 50S
           ribosomal protein L9-like isoform 2 [Glycine max]
          Length = 222

 Score =  219 bits (558), Expect = 5e-55
 Identities = 116/219 (52%), Positives = 157/219 (71%), Gaps = 11/219 (5%)
 Frame = +2

Query: 53  GTRNVLRQLIKTHHNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKAGETVKV 232
           G R VLR    +  N+     + +P     QGLRYK +KL+VILTT IDKLGKAG+TVKV
Sbjct: 10  GVRQVLRFRDASCDNV-----VVNPLLYASQGLRYK-RKLQVILTTDIDKLGKAGDTVKV 63

Query: 233 APGYFRNYLMPNILAVPNIAKYDFIMREQRKLYQRQEVEVVKEVP---QAKQDTIKEFEQ 403
           APGYFRN+LMP +LA PNI K+ +++ EQRK+YQ  E E  ++V    ++K+D +KE+E+
Sbjct: 64  APGYFRNHLMPKLLAFPNIDKFAYLLNEQRKIYQPTEEEKQEDVTLVKESKEDMMKEYEK 123

Query: 404 AANRLEKANLVLRRMV--------KSSSDLNELRSPVTKEELLAEVSRQLCVNIGPENLH 559
           AA RL+KA LVLRR++        +S  D  ELR PVTK+ L+AEV+RQLCVN+ P+NLH
Sbjct: 124 AALRLDKAQLVLRRLINVQKAKSRESKEDPLELRYPVTKDTLVAEVARQLCVNVAPDNLH 183

Query: 560 LPASISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 676
           LP+ +S+ G+Y++ L  P++I LPEGKV W+L VK+R K
Sbjct: 184 LPSPLSTLGEYEVPLRIPRSIPLPEGKVNWSLKVKVRSK 222


>gb|ACU17789.1| unknown [Glycine max]
          Length = 222

 Score =  219 bits (558), Expect = 5e-55
 Identities = 113/217 (52%), Positives = 159/217 (73%), Gaps = 11/217 (5%)
 Frame = +2

Query: 59  RNVLRQLIKTHHNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKAGETVKVAP 238
           R+ +RQ+++   +    + + +P     QGLRYK +KL+VILTT IDKLGKAG+TVKVAP
Sbjct: 8   RHSVRQVLR-FRDASCDNVVVNPLLYASQGLRYK-RKLQVILTTDIDKLGKAGDTVKVAP 65

Query: 239 GYFRNYLMPNILAVPNIAKYDFIMREQRKLYQRQEVEVVKEVP---QAKQDTIKEFEQAA 409
           GYFRN+LMP +LA PNI K+ +++ EQRK+YQ  E E  ++V    ++K+D +KE+E+AA
Sbjct: 66  GYFRNHLMPKLLAFPNIDKFAYLLNEQRKIYQPTEEEKQEDVTLVKESKEDMMKEYEKAA 125

Query: 410 NRLEKANLVLRRMV--------KSSSDLNELRSPVTKEELLAEVSRQLCVNIGPENLHLP 565
            RL+KA LVLRR++        +S  D  ELR PVTK+ L+AEV+RQLCVN+ P+NLHLP
Sbjct: 126 LRLDKAQLVLRRLINVQKAKSRESKEDPLELRYPVTKDTLVAEVARQLCVNVAPDNLHLP 185

Query: 566 ASISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 676
           + +S+ G+Y++ L  P++I LPEGKV W+L VK+R K
Sbjct: 186 SPLSTLGEYEVPLRIPRSIPLPEGKVNWSLKVKVRSK 222