BLASTX nr result

ID: Coptis23_contig00021252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021252
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263547.1| PREDICTED: uncharacterized protein LOC100266...   182   3e-44
ref|XP_002512053.1| conserved hypothetical protein [Ricinus comm...   176   2e-42
ref|XP_002312293.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
ref|XP_002314995.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_003517861.1| PREDICTED: uncharacterized protein LOC100798...   155   3e-36

>ref|XP_002263547.1| PREDICTED: uncharacterized protein LOC100266436 [Vitis vinifera]
          Length = 323

 Score =  182 bits (461), Expect = 3e-44
 Identities = 104/170 (61%), Positives = 122/170 (71%), Gaps = 2/170 (1%)
 Frame = +3

Query: 24  MSVSGFSDQDRVYRKSTQRRNDSGELDVFEATRYFYGCNETSGCNGAISSQKATGEEKQS 203
           MSV+  S+ D++Y+KS  RRNDSGELDVFEA RYF G NE  G NGA   Q+    E++ 
Sbjct: 1   MSVAALSEADKIYKKSFHRRNDSGELDVFEAARYFSGGNEIIGYNGAAFPQRMMMREERQ 60

Query: 204 LSTGRRMSLDMPTRSSLPSK-SHRVEKQMMNEKIYKQPSSPGGRLASFLNSLFLQAAXXX 380
              G R+SLDMP RSSLP++ SH VEKQM  +  YKQPSSPGGRLASFLNSLF Q     
Sbjct: 61  GWRGGRISLDMPMRSSLPTQSSHAVEKQMKEKIKYKQPSSPGGRLASFLNSLFNQTNSKK 120

Query: 381 XXXXXXTQSLKD-EESPSGRRKRRSSVSLFRSANTNDSKSVYASSTASGF 527
                  QS+KD EESP GRRKRRSS+S FRS++T DSKSVY SS++SGF
Sbjct: 121 KKSKSTAQSIKDEEESPGGRRKRRSSISHFRSSSTADSKSVY-SSSSSGF 169


>ref|XP_002512053.1| conserved hypothetical protein [Ricinus communis]
           gi|223549233|gb|EEF50722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 324

 Score =  176 bits (445), Expect = 2e-42
 Identities = 98/173 (56%), Positives = 120/173 (69%), Gaps = 5/173 (2%)
 Frame = +3

Query: 24  MSVSGFSDQDRVYRKSTQRRNDSGELDVFEATRYFYGCNETSGCNGAISSQKATGEEKQS 203
           MS++G  D  ++Y+KS  RRNDS ELDVFEA RYF G NE +G NG   +QK   ++ + 
Sbjct: 1   MSITGLPDTSKLYKKSLHRRNDSDELDVFEAARYFSGYNEAAGYNGGTYTQKILRDDYRH 60

Query: 204 LSTGRRMSLDMPTRSSLP----SKSHRVEKQMMNEKIYKQPSSPGGRLASFLNSLFLQAA 371
              G RMSLD+P R+ LP    S  H VEKQ++ EK YKQPSSPGGRLASFLNSLF Q +
Sbjct: 61  PWRGGRMSLDVPMRNPLPQQTHSHHHTVEKQILKEKKYKQPSSPGGRLASFLNSLFNQTS 120

Query: 372 XXXXXXXXXTQSLK-DEESPSGRRKRRSSVSLFRSANTNDSKSVYASSTASGF 527
                    TQS K D+ESP GRRKRRSS+S FRS +T D+KS+Y SS++SGF
Sbjct: 121 SKKKKSKSATQSTKDDDESPGGRRKRRSSISHFRSTSTADTKSLY-SSSSSGF 172


>ref|XP_002312293.1| predicted protein [Populus trichocarpa] gi|222852113|gb|EEE89660.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  173 bits (438), Expect = 2e-41
 Identities = 100/175 (57%), Positives = 123/175 (70%), Gaps = 7/175 (4%)
 Frame = +3

Query: 24  MSVSGFS-DQDRVYRKSTQRRNDSGELDVFEATRYFYGCNET-SGCNGAISSQKATGEEK 197
           MS++G S D  + Y+KS  RRNDS ELDVFEA RYF G NE  +G NGA+ +QK   E+ 
Sbjct: 1   MSITGLSSDTGKPYKKSLHRRNDSDELDVFEAARYFSGYNEAGAGYNGAVYTQKVMREDH 60

Query: 198 QSLSTGRRMSLDMPTRSSLP----SKSHRVEKQMMNEKIYKQPSSPGGRLASFLNSLFLQ 365
           +    G R+SLD+P R+ LP      SH VEKQ++ EK YKQPSSPGGRLASFLNSLF Q
Sbjct: 61  KHSWRGGRVSLDVPMRNPLPHHLHQHSHTVEKQILKEKKYKQPSSPGGRLASFLNSLFNQ 120

Query: 366 AAXXXXXXXXXTQSLK-DEESPSGRRKRRSSVSLFRSANTNDSKSVYASSTASGF 527
            +         TQS+K D+ESP GRRKRRSS+S FRS+ T D+KS+Y SS++SGF
Sbjct: 121 TSSKKKKSKSTTQSMKDDDESPGGRRKRRSSISHFRSSGTTDTKSLY-SSSSSGF 174


>ref|XP_002314995.1| predicted protein [Populus trichocarpa] gi|222864035|gb|EEF01166.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  170 bits (431), Expect = 1e-40
 Identities = 98/175 (56%), Positives = 124/175 (70%), Gaps = 7/175 (4%)
 Frame = +3

Query: 24  MSVSGFS-DQDRVYRKSTQRRNDSGELDVFEATRYFYGCNET-SGCNGAISSQKATGEEK 197
           MS++G S D  + Y+KS  RRN+S ELDVFEA RYF G NE  +G NGA  +Q+   E+ 
Sbjct: 1   MSITGLSSDPSKPYKKSLHRRNNSDELDVFEAARYFSGYNEAGAGYNGATYTQRVMREDH 60

Query: 198 QSLSTGRRMSLDMPTRSSLP----SKSHRVEKQMMNEKIYKQPSSPGGRLASFLNSLFLQ 365
           ++   G RMSLD+P R+ LP     + H VEKQ++ EK YKQPSSPGGRLASFLNSLF Q
Sbjct: 61  KNSWRGGRMSLDVPMRNPLPHHIHQQPHTVEKQILKEKKYKQPSSPGGRLASFLNSLFNQ 120

Query: 366 AAXXXXXXXXXTQSLK-DEESPSGRRKRRSSVSLFRSANTNDSKSVYASSTASGF 527
            +         TQS+K D+ESP GRRKRRSS+S FRS++T D+KS+Y SS++SGF
Sbjct: 121 TSSKKKKSKSTTQSMKDDDESPGGRRKRRSSISHFRSSSTTDTKSLY-SSSSSGF 174


>ref|XP_003517861.1| PREDICTED: uncharacterized protein LOC100798968 [Glycine max]
          Length = 348

 Score =  155 bits (393), Expect = 3e-36
 Identities = 92/167 (55%), Positives = 113/167 (67%), Gaps = 5/167 (2%)
 Frame = +3

Query: 24  MSVSGFSDQDRVYRKSTQRRNDSGELDVFEATRYFYGCNETSGCNGAISS--QKATGEEK 197
           MS++G  D +  + KS  RRNDSGELDVFEA RYF G +E  G     ++  QK   EE+
Sbjct: 1   MSIAGLIDPEMNHNKSFHRRNDSGELDVFEAARYFSGYSEVVGYTSGSTTYTQKIMREER 60

Query: 198 QSLST-GRRMSLDMPTRSSLPSKSHRVEKQM-MNEKIYKQPSSPGGRLASFLNSLFLQAA 371
                   R+SLDMP RS LP + H +EKQ+ M EK  KQPSSPGGRLASFLNSLF Q+A
Sbjct: 61  HHHGQRAARISLDMPMRSLLPQQFHGMEKQIIMKEKKNKQPSSPGGRLASFLNSLFSQSA 120

Query: 372 XXXXXXXXXTQSLKDE-ESPSGRRKRRSSVSLFRSANTNDSKSVYAS 509
                    +QS+KDE ESP GRR+RRSS+S FRS++T DSKS+Y+S
Sbjct: 121 SKKKKSKSGSQSMKDEDESPGGRRRRRSSISHFRSSSTADSKSLYSS 167


Top