BLASTX nr result

ID: Coptis23_contig00021251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021251
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member...   136   2e-30
ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arab...   133   1e-29
ref|XP_002524008.1| AMP dependent ligase, putative [Ricinus comm...   129   2e-28
ref|NP_198442.2| AMP-dependent synthetase and ligase family prot...   127   9e-28
gb|AAM20623.1| unknown protein [Arabidopsis thaliana]                 127   9e-28

>ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member 4 [Vitis vinifera]
            gi|296088768|emb|CBI38218.3| unnamed protein product
            [Vitis vinifera]
          Length = 1175

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/132 (50%), Positives = 89/132 (67%), Gaps = 2/132 (1%)
 Frame = -2

Query: 390  DESPV-SKCLKVEKNTYPSSSITPLREEVPWVSRLNLSTSCSFSRCNKVFYEGNDG-NDV 217
            D+ PV SKCLKV+ NTY +S      +  PW S  ++   CSFSRCNKV  E      ++
Sbjct: 739  DKYPVTSKCLKVDSNTYATSKSVIPCDGCPWNSN-SVPMLCSFSRCNKVMCEVESKMKNI 797

Query: 216  CQACWSAQYPRNRKGSVHELWKVHSKSCIDASPLVVSKDGDIYLFIGSHSQIFLCIDAAS 37
            C   WS ++PRN+ G + ELWKVH +SC+DAS +VV KD DIYL IGSHS  F+C++A S
Sbjct: 798  CHTTWSIEFPRNKSGFMRELWKVHMESCVDASAIVVFKDWDIYLLIGSHSHKFVCVNAKS 857

Query: 36   GLVQWEVKLEGR 1
            G ++W ++LEGR
Sbjct: 858  GFIRWGIELEGR 869


>ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arabidopsis lyrata subsp.
            lyrata] gi|297316291|gb|EFH46714.1| hypothetical protein
            ARALYDRAFT_330218 [Arabidopsis lyrata subsp. lyrata]
          Length = 1120

 Score =  133 bits (335), Expect = 1e-29
 Identities = 74/162 (45%), Positives = 99/162 (61%), Gaps = 8/162 (4%)
 Frame = -2

Query: 462  DVNLEARNGNKLVRSSLGIHSGSIDESPVSKCLKVEKNTYP------SSSITP-LREEVP 304
            D   E++NGN LV  ++  HSG +  SP    ++ EKN  P      S   +P ++E+  
Sbjct: 661  DHKTESQNGNGLVSRTVPRHSG-VTSSPTPSGMQCEKNNSPKRLKIDSKIFSPKMKEKKS 719

Query: 303  WVSRLNLSTSCSFSRCNKVFYEGNDGNDVC-QACWSAQYPRNRKGSVHELWKVHSKSCID 127
            W S  +  T C+FSRCNKV+   +  N+   +  WS + PRN+  S+ E+WKVH +SC+D
Sbjct: 720  WDSGFS-QTQCAFSRCNKVYSPNSCSNEEANRENWSVEIPRNQMVSMQEIWKVHMESCVD 778

Query: 126  ASPLVVSKDGDIYLFIGSHSQIFLCIDAASGLVQWEVKLEGR 1
            ASPLVV KD   YLFIGSHS+ F CIDA SG + WE  LEGR
Sbjct: 779  ASPLVVLKDSKTYLFIGSHSRKFSCIDAKSGSIYWETTLEGR 820


>ref|XP_002524008.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223536735|gb|EEF38376.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 1144

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/137 (50%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
 Frame = -2

Query: 405  HSGSIDESPVSKCLKVEKNTYPSSSITPLREEVPWVSRLNLSTSCSFSRCNKVFYE-GND 229
            H  +      SK  KV+ + + SS    L +   W + + +S  CSFSRCNKV YE    
Sbjct: 698  HPNNDQNVAASKRFKVDLDRHISSKHVSLSDGYSWPALIPIS--CSFSRCNKVMYERAYS 755

Query: 228  GNDVCQACWSAQYPRNRK-GSVHELWKVHSKSCIDASPLVVSKDGDIYLFIGSHSQIFLC 52
             ++  Q  WS + PRN K  S+ ELWK+H  SC+DASPLVV KD D++LFIGSH+Q F+C
Sbjct: 756  LSNTHQLSWSVEVPRNGKCSSLQELWKIHMVSCVDASPLVVFKDQDVFLFIGSHAQKFIC 815

Query: 51   IDAASGLVQWEVKLEGR 1
            IDA SG VQWEVKL+GR
Sbjct: 816  IDAKSGSVQWEVKLQGR 832


>ref|NP_198442.2| AMP-dependent synthetase and ligase family protein [Arabidopsis
            thaliana] gi|378548266|sp|F4K1G2.1|AEE19_ARATH RecName:
            Full=Putative acyl-activating enzyme 19
            gi|332006646|gb|AED94029.1| AMP-dependent synthetase and
            ligase family protein [Arabidopsis thaliana]
          Length = 1040

 Score =  127 bits (319), Expect = 9e-28
 Identities = 72/163 (44%), Positives = 95/163 (58%), Gaps = 9/163 (5%)
 Frame = -2

Query: 462  DVNLEARNGNKLVRSSLGIHSGSIDESPVSKCLKVEKNTYPSS--------SITPLREEV 307
            D  +E++NGN LV  ++ +HSG +   P    L+ EKN  P          S   ++E  
Sbjct: 574  DHKIESQNGNGLVSRTVPLHSG-VTSGPTPSKLQCEKNNSPKRLKIDYEKFSPKRMKENK 632

Query: 306  PWVSRLNLSTSCSFSRCNKVFYEGNDGNDVC-QACWSAQYPRNRKGSVHELWKVHSKSCI 130
             W S  +    C+FSRCNKV    +  N+   +  WS + PRN+  S+ E+WKVH +SC+
Sbjct: 633  LWDSGFS-QIQCAFSRCNKVHSPESCSNEEANREYWSLEIPRNQMVSMQEIWKVHMESCV 691

Query: 129  DASPLVVSKDGDIYLFIGSHSQIFLCIDAASGLVQWEVKLEGR 1
            DASPLVV KD   YLFIGSHS+ F CIDA SG + WE  LEGR
Sbjct: 692  DASPLVVLKDSKTYLFIGSHSRKFSCIDAKSGSMYWETILEGR 734


>gb|AAM20623.1| unknown protein [Arabidopsis thaliana]
          Length = 1040

 Score =  127 bits (319), Expect = 9e-28
 Identities = 72/163 (44%), Positives = 95/163 (58%), Gaps = 9/163 (5%)
 Frame = -2

Query: 462  DVNLEARNGNKLVRSSLGIHSGSIDESPVSKCLKVEKNTYPSS--------SITPLREEV 307
            D  +E++NGN LV  ++ +HSG +   P    L+ EKN  P          S   ++E  
Sbjct: 574  DHKIESQNGNGLVSRTVPLHSG-VTSGPTPSKLQCEKNNSPKRLKIDYEKFSPKRMKENK 632

Query: 306  PWVSRLNLSTSCSFSRCNKVFYEGNDGNDVC-QACWSAQYPRNRKGSVHELWKVHSKSCI 130
             W S  +    C+FSRCNKV    +  N+   +  WS + PRN+  S+ E+WKVH +SC+
Sbjct: 633  LWDSGFS-QIQCAFSRCNKVHSPESCSNEEANREYWSLEIPRNQMVSMQEIWKVHMESCV 691

Query: 129  DASPLVVSKDGDIYLFIGSHSQIFLCIDAASGLVQWEVKLEGR 1
            DASPLVV KD   YLFIGSHS+ F CIDA SG + WE  LEGR
Sbjct: 692  DASPLVVLKDSKTYLFIGSHSRKFSCIDAKSGSMYWETILEGR 734


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