BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021237
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containi...   315   4e-84
emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]   315   4e-84
ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|2...   273   2e-71
ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containi...   271   8e-71
gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arab...   256   2e-66

>ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
           [Vitis vinifera] gi|297734603|emb|CBI16654.3| unnamed
           protein product [Vitis vinifera]
          Length = 577

 Score =  315 bits (808), Expect = 4e-84
 Identities = 144/220 (65%), Positives = 177/220 (80%)
 Frame = +2

Query: 2   IDMFAKCGETVKAKQVFCRIHNRETPSWNAMINGLAINGHAKEALEVFSEMLKEGVKPNE 181
           IDM+AKCGE VK++ VF  +  +ET SWNA+IN  AING AKEAL +F EM  +G  PNE
Sbjct: 325 IDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNE 384

Query: 182 ITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEVVKVEVD 361
           ITMIGVLSACNH+GLV+EGK+WFK ME +G+ P+IEHYGCMVD+LGRAGC++E  K+   
Sbjct: 385 ITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMES 444

Query: 362 MPYELNSIILSSFLFACGCRGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRWKEV 541
           MPYE N IILSSFLFACG   DV RAE+ +++A  +E WNDGNY+M+RNLYA EKRWKE 
Sbjct: 445 MPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEA 504

Query: 542 EEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAHLQW 661
           +E++G+MR+   KKE GCS IEV++RVWEFVAGDR H +W
Sbjct: 505 DEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKW 544


>emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
          Length = 751

 Score =  315 bits (808), Expect = 4e-84
 Identities = 144/220 (65%), Positives = 177/220 (80%)
 Frame = +2

Query: 2    IDMFAKCGETVKAKQVFCRIHNRETPSWNAMINGLAINGHAKEALEVFSEMLKEGVKPNE 181
            IDM+AKCGE VK++ VF  +  +ET SWNA+IN  AING AKEAL +F EM  +G  PNE
Sbjct: 499  IDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNE 558

Query: 182  ITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEVVKVEVD 361
            ITMIGVLSACNH+GLV+EGK+WFK ME +G+ P+IEHYGCMVD+LGRAGC++E  K+   
Sbjct: 559  ITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMES 618

Query: 362  MPYELNSIILSSFLFACGCRGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRWKEV 541
            MPYE N IILSSFLFACG   DV RAE+ +++A  +E WNDGNY+M+RNLYA EKRWKE 
Sbjct: 619  MPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEA 678

Query: 542  EEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAHLQW 661
            +E++G+MR+   KKE GCS IEV++RVWEFVAGDR H +W
Sbjct: 679  DEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKW 718


>ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|222835186|gb|EEE73621.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  273 bits (699), Expect = 2e-71
 Identities = 131/219 (59%), Positives = 169/219 (77%)
 Frame = +2

Query: 2   IDMFAKCGETVKAKQVFCRIHNRETPSWNAMINGLAINGHAKEALEVFSEMLKEGVKPNE 181
           +DM+ KCGE  KA++VF  I  +ET +WNA+ING A+NG A EALE FSEM +EG+KPN+
Sbjct: 339 VDMYLKCGEISKARKVFSEIPKKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPND 398

Query: 182 ITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEVVKVEVD 361
           ITM GVLSAC+H GLV+EGK  FK M   G+ P+IEHYGC+VD+LGRAGC++E   +   
Sbjct: 399 ITMTGVLSACSHGGLVEEGKGQFKAMIESGLSPKIEHYGCLVDLLGRAGCLDEAENLIKS 458

Query: 362 MPYELNSIILSSFLFACGCRGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRWKEV 541
           MP+E N IILSSF FACG   DV RA++ + +A ++EP N+G YVMMRNLYA E+RWK+V
Sbjct: 459 MPFEANGIILSSFSFACGFSNDVTRAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERWKDV 518

Query: 542 EEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAHLQ 658
           +E+ G+MR+  AKKEVG S IEV++RV EF++G  AH Q
Sbjct: 519 KEINGLMRRRGAKKEVGSSAIEVDSRVSEFISGGIAHPQ 557


>ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880-like
            [Glycine max]
          Length = 599

 Score =  271 bits (693), Expect = 8e-71
 Identities = 127/217 (58%), Positives = 162/217 (74%)
 Frame = +2

Query: 2    IDMFAKCGETVKAKQVFCRIHNRETPSWNAMINGLAINGHAKEALEVFSEMLKEGVKPNE 181
            IDM+AKCGE  KAK  F  +  RET SWNA+ING A+NG AKEALEVF+ M++EG  PNE
Sbjct: 361  IDMYAKCGEITKAKLAFEGMTERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNE 420

Query: 182  ITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEVVKVEVD 361
            +TMIGVLSACNH GLV+EG++WF  ME +GI P++EHYGCMVD+LGRAGC++E   +   
Sbjct: 421  VTMIGVLSACNHCGLVEEGRRWFNAMERFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQT 480

Query: 362  MPYELNSIILSSFLFACGCRGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRWKEV 541
            MPY+ N IILSSFLFACG   DV+RAE+ +++   ++    GNYVM+RNLYA  +RW +V
Sbjct: 481  MPYDANGIILSSFLFACGYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDV 540

Query: 542  EEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAH 652
            E+++ +M+K    KEV CSVIE+     EF AGD  H
Sbjct: 541  EDVKQMMKKRGTSKEVACSVIEIGGSFIEFAAGDYLH 577



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
 Frame = +2

Query: 23  GETVKAKQVFCRIHNRETPSWNAMINGLAINGHAKEALEVFSEMLKEGVKPNEITMIGVL 202
           G+   AK +F  +  +   +WNAMI G   N  + +ALE+F EM    V+PNE+T++ VL
Sbjct: 267 GDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVL 326

Query: 203 SACNHAGLVDEGKKWFKLMENYGIIPRIEHYG-CMVDILGRAGCVEEVVKVEV 358
            A    G +D G +W         + R    G  ++D+  + G   E+ K ++
Sbjct: 327 PAVADLGALDLG-RWIHRFALRKKLDRSARIGTALIDMYAKCG---EITKAKL 375


>gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 555

 Score =  256 bits (655), Expect = 2e-66
 Identities = 119/217 (54%), Positives = 166/217 (76%)
 Frame = +2

Query: 2   IDMFAKCGETVKAKQVFCRIHNRETPSWNAMINGLAINGHAKEALEVFSEMLKEGVKPNE 181
           +DM++KCGE  KAK++F  +  ++  SWNAMI+G A+NG+A+ AL++F  M+ E  KP+E
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDE 374

Query: 182 ITMIGVLSACNHAGLVDEGKKWFKLMENYGIIPRIEHYGCMVDILGRAGCVEEVVKVEVD 361
           ITM+ V++ACNH GLV+EG+KWF +M   G+  +IEHYGCMVD+LGRAG ++E   +  +
Sbjct: 375 ITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITN 434

Query: 362 MPYELNSIILSSFLFACGCRGDVMRAEKFMRKAFDIEPWNDGNYVMMRNLYAGEKRWKEV 541
           MP+E N IILSSFL ACG   D+ RAE+ ++KA ++EP NDGNYV++RNLYA +KRW + 
Sbjct: 435 MPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDF 494

Query: 542 EEMRGVMRKYRAKKEVGCSVIEVNNRVWEFVAGDRAH 652
             ++ VMRK +AKKEVGCS+IE+N  V EF++GD  H
Sbjct: 495 GMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTH 531