BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021236
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containi...   266   2e-69
emb|CBI38215.3| unnamed protein product [Vitis vinifera]              209   2e-52
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...   209   2e-52
gb|AEP33762.1| organelle transcript processing 82, partial [Hesp...   199   2e-49
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...   199   4e-49

>ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 584

 Score =  266 bits (680), Expect = 2e-69
 Identities = 122/193 (63%), Positives = 159/193 (82%)
 Frame = -1

Query: 607 LELYKQMESANVAPDDVTFVGVLCACCHIGLVDEGRRQFNRMKKEFGIIPKIEHYGCMVD 428
           LEL+KQMES  V P+D+TFV VL AC HIG V+EG ++FN+M KEF I PK+EHYGCMVD
Sbjct: 375 LELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVD 434

Query: 427 ILGRTGLIHEAKDLIRSMPMDPNIVVLGAFLSACKLHGFTTVGDDVMRHLQNLAPEDGGC 248
           IL R GLI+EAK++IR+MP++PN+V+ GA L+ACK+HG+T VG+DV+ ++Q L  EDGGC
Sbjct: 435 ILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGC 494

Query: 247 YVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIPGCSFIEVNSVVHEFLVDDKLHPSWRE 68
           YVLLSNI+A  +QW++V + RKMMK M VEKKIPG S IE++SVVH+F  +D+LH  WRE
Sbjct: 495 YVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWRE 554

Query: 67  LCVIIDRLSTHLE 29
           +  +I+RL+THLE
Sbjct: 555 VSTVIERLNTHLE 567


>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  209 bits (533), Expect = 2e-52
 Identities = 94/197 (47%), Positives = 138/197 (70%)
 Frame = -1

Query: 607 LELYKQMESANVAPDDVTFVGVLCACCHIGLVDEGRRQFNRMKKEFGIIPKIEHYGCMVD 428
           L+L+ +M    + PD+VTFVGVL AC H+GLV+EGR+ F  M   + + P++EHYGCMVD
Sbjct: 392 LDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVD 451

Query: 427 ILGRTGLIHEAKDLIRSMPMDPNIVVLGAFLSACKLHGFTTVGDDVMRHLQNLAPEDGGC 248
           +LGR GLI+EA++ IR+MP++P+  VLGA L ACK+HG   +G+ VM+ ++ + P   G 
Sbjct: 452 LLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGA 511

Query: 247 YVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIPGCSFIEVNSVVHEFLVDDKLHPSWRE 68
           YVL+SNIY+  N+W   +++RK MK   +E K PGCS IE++ V+HEF   DK HP  +E
Sbjct: 512 YVLMSNIYSSANRWRDALKLRKTMKERNLE-KTPGCSSIELDGVIHEFQKGDKSHPKIKE 570

Query: 67  LCVIIDRLSTHLEFE*C 17
           +  ++D + +HL+   C
Sbjct: 571 IYKLLDEIMSHLKNNEC 587


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 617

 Score =  209 bits (533), Expect = 2e-52
 Identities = 94/197 (47%), Positives = 138/197 (70%)
 Frame = -1

Query: 607  LELYKQMESANVAPDDVTFVGVLCACCHIGLVDEGRRQFNRMKKEFGIIPKIEHYGCMVD 428
            L+L+ +M    + PD+VTFVGVL AC H+GLV+EGR+ F  M   + + P++EHYGCMVD
Sbjct: 414  LDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVD 473

Query: 427  ILGRTGLIHEAKDLIRSMPMDPNIVVLGAFLSACKLHGFTTVGDDVMRHLQNLAPEDGGC 248
            +LGR GLI+EA++ IR+MP++P+  VLGA L ACK+HG   +G+ VM+ ++ + P   G 
Sbjct: 474  LLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGA 533

Query: 247  YVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIPGCSFIEVNSVVHEFLVDDKLHPSWRE 68
            YVL+SNIY+  N+W   +++RK MK   +E K PGCS IE++ V+HEF   DK HP  +E
Sbjct: 534  YVLMSNIYSSANRWRDALKLRKTMKERNLE-KTPGCSSIELDGVIHEFQKGDKSHPKIKE 592

Query: 67   LCVIIDRLSTHLEFE*C 17
            +  ++D + +HL+   C
Sbjct: 593  IYKLLDEIMSHLKNNEC 609


>gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  199 bits (507), Expect = 2e-49
 Identities = 86/192 (44%), Positives = 136/192 (70%)
 Frame = -1

Query: 604 ELYKQMESANVAPDDVTFVGVLCACCHIGLVDEGRRQFNRMKKEFGIIPKIEHYGCMVDI 425
           +++ +M    + PDD+TFVG+L AC H G++D GR  F  M++++ I PK+EHYGCM+D+
Sbjct: 400 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDL 459

Query: 424 LGRTGLIHEAKDLIRSMPMDPNIVVLGAFLSACKLHGFTTVGDDVMRHLQNLAPEDGGCY 245
           LG +GL  EA+++I +MPM+P+ V+  + L ACK+HG   +G+   + L  + PE+ G Y
Sbjct: 460 LGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSY 519

Query: 244 VLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIPGCSFIEVNSVVHEFLVDDKLHPSWREL 65
           VLLSNIYA   +W++V ++R ++    ++KK+PGCS IE++SVVHEF++ DKLHP  RE+
Sbjct: 520 VLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREI 579

Query: 64  CVIIDRLSTHLE 29
             +++ +   LE
Sbjct: 580 YGMLEEMEVLLE 591


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 801

 Score =  199 bits (505), Expect = 4e-49
 Identities = 95/193 (49%), Positives = 133/193 (68%)
 Frame = -1

Query: 607  LELYKQMESANVAPDDVTFVGVLCACCHIGLVDEGRRQFNRMKKEFGIIPKIEHYGCMVD 428
            LEL+++ME+  V P+D+TF+G L AC H GL+ EG+R F++M  EFG  PK+EHYGCMVD
Sbjct: 515  LELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVD 574

Query: 427  ILGRTGLIHEAKDLIRSMPMDPNIVVLGAFLSACKLHGFTTVGDDVMRHLQNLAPEDGGC 248
            +LGR GL+ EA +LI+SMPM PNI V G+FL+ACKLH    +G+   +   +L P   G 
Sbjct: 575  LLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGY 634

Query: 247  YVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIPGCSFIEVNSVVHEFLVDDKLHPSWRE 68
             VL+SNIYA  N+W  V  +R+ MK   + K+ PG S IEVN ++HEF++ D+ HP  ++
Sbjct: 635  NVLMSNIYASANRWGDVAYIRRAMKDEGIVKE-PGVSSIEVNGLLHEFIMGDREHPDAKK 693

Query: 67   LCVIIDRLSTHLE 29
            +  +ID +   LE
Sbjct: 694  VYEMIDEMREKLE 706