BLASTX nr result
ID: Coptis23_contig00021234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00021234
(267 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACC66148.3| cell division cycle protein [Dimocarpus longan] g... 100 4e-37
ref|XP_001713464.1| cell division cycle protein 48 homolog [Guil... 99 1e-36
ref|XP_003056149.1| cell division cycle protein 48 [Micromonas p... 97 2e-36
ref|XP_002507162.1| cell division cycle protein 48-like protein,... 97 3e-36
ref|XP_001712323.1| cdc48b [Hemiselmis andersenii] gi|159765770|... 97 4e-36
>gb|ACC66148.3| cell division cycle protein [Dimocarpus longan]
gi|221327637|gb|ACM17483.1| cell division cycle protein
[Dimocarpus longan]
Length = 805
Score = 99.8 bits (247), Expect(2) = 4e-37
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = -2
Query: 266 VEVPNVS*EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
VEVPNVS EDIGGL NVKRELQE+VQYP+EHPE+FEKFGM+PSKGVLFYGPP
Sbjct: 473 VEVPNVSWEDIGGLENVKRELQETVQYPVEHPERFEKFGMAPSKGVLFYGPP 524
Score = 80.1 bits (196), Expect(2) = 4e-37
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = -1
Query: 114 PPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
PPGC KTLLAKAIANECQANFI+VKGPELLTMWFGESE
Sbjct: 523 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 560
Score = 50.4 bits (119), Expect(2) = 1e-12
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -2
Query: 242 EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
+D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPP
Sbjct: 208 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 251
Score = 47.4 bits (111), Expect(2) = 1e-12
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 123 LWTPPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
L+ PPG KTL+A+A+ANE A F + GPE+++ GESE
Sbjct: 247 LYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESE 287
>ref|XP_001713464.1| cell division cycle protein 48 homolog [Guillardia theta]
gi|13794396|gb|AAK39773.1|AF083031_130 cell division
cycle protein 48 homolog [Guillardia theta]
Length = 752
Score = 98.6 bits (244), Expect(2) = 1e-36
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -2
Query: 266 VEVPNVS*EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
VE+PN++ EDIGGL NVKRELQE+VQYP+EHPEKFEKFGM PSKGVLFYGPP
Sbjct: 448 VEIPNITWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMQPSKGVLFYGPP 499
Score = 79.7 bits (195), Expect(2) = 1e-36
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = -1
Query: 114 PPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
PPGC KTLLAKAIANECQANFI++KGPELLTMWFGESE
Sbjct: 498 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 535
Score = 47.8 bits (112), Expect(2) = 1e-11
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = -1
Query: 135 RSSFLWTPPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
R ++ P GC KTL+AKA+ANE A ++ GPE+++ GESE
Sbjct: 218 RGVLMYGPSGCGKTLIAKAVANETGAFLYSINGPEIMSKLAGESE 262
Score = 46.2 bits (108), Expect(2) = 1e-11
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = -2
Query: 266 VEVPNVS*EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGP 114
V+ ++ E IGG +++E V+ P++HP+ F G+ P +GVL YGP
Sbjct: 175 VDYEKITYESIGGCQKQLSQIRELVELPLKHPQLFNTVGIKPPRGVLMYGP 225
>ref|XP_003056149.1| cell division cycle protein 48 [Micromonas pusilla CCMP1545]
gi|226462233|gb|EEH59525.1| cell division cycle protein
48 [Micromonas pusilla CCMP1545]
Length = 823
Score = 97.4 bits (241), Expect(2) = 2e-36
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = -2
Query: 266 VEVPNVS*EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
VEVPNVS EDIGGL +VK+ELQE+VQYP+EHPEKFEKFGM+PSKGVLFYGPP
Sbjct: 474 VEVPNVSWEDIGGLESVKQELQETVQYPVEHPEKFEKFGMAPSKGVLFYGPP 525
Score = 80.1 bits (196), Expect(2) = 2e-36
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = -1
Query: 114 PPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
PPGC KTLLAKAIANECQANFI+VKGPELLTMWFGESE
Sbjct: 524 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 561
Score = 48.1 bits (113), Expect(2) = 5e-12
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = -2
Query: 242 EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
+D+GG+ +++E V+ P+ HP F+ G+ P KG+L YGPP
Sbjct: 209 DDVGGVRKQMAQIRELVELPLRHPLLFKTIGVKPPKGILLYGPP 252
Score = 47.4 bits (111), Expect(2) = 5e-12
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 123 LWTPPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
L+ PPG KTL+A+A+ANE A F + GPE+++ GESE
Sbjct: 248 LYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESE 288
>ref|XP_002507162.1| cell division cycle protein 48-like protein, expessed [Micromonas
sp. RCC299] gi|226522437|gb|ACO68420.1| cell division
cycle protein 48-like protein, expessed [Micromonas sp.
RCC299]
Length = 821
Score = 97.1 bits (240), Expect(2) = 3e-36
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = -2
Query: 266 VEVPNVS*EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
VEVPNVS EDIGGL VK+ELQE+VQYP+EHPEKFEKFGM+PSKGVLFYGPP
Sbjct: 473 VEVPNVSWEDIGGLETVKQELQETVQYPVEHPEKFEKFGMAPSKGVLFYGPP 524
Score = 80.1 bits (196), Expect(2) = 3e-36
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = -1
Query: 114 PPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
PPGC KTLLAKAIANECQANFI+VKGPELLTMWFGESE
Sbjct: 523 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 560
Score = 48.9 bits (115), Expect(2) = 3e-12
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = -2
Query: 242 EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
+D+GG+ +++E V+ P+ HP F+ G+ P KG+L YGPP
Sbjct: 208 DDVGGVRKQMAQIRELVELPLRHPTLFKTIGVKPPKGILLYGPP 251
Score = 47.4 bits (111), Expect(2) = 3e-12
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 123 LWTPPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
L+ PPG KTL+A+A+ANE A F + GPE+++ GESE
Sbjct: 247 LYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESE 287
>ref|XP_001712323.1| cdc48b [Hemiselmis andersenii] gi|159765770|gb|ABW97998.1| cdc48b
[Hemiselmis andersenii]
Length = 780
Score = 97.1 bits (240), Expect(2) = 4e-36
Identities = 43/52 (82%), Positives = 49/52 (94%)
Frame = -2
Query: 266 VEVPNVS*EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
VE+PN++ +DIGGL NVKRELQE+VQYP+EHPEKFEKFGM PSKGVLFYGPP
Sbjct: 456 VEIPNITWKDIGGLENVKRELQETVQYPVEHPEKFEKFGMQPSKGVLFYGPP 507
Score = 79.7 bits (195), Expect(2) = 4e-36
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = -1
Query: 114 PPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
PPGC KTLLAKAIANECQANFI++KGPELLTMWFGESE
Sbjct: 506 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 543
Score = 47.0 bits (110), Expect(2) = 2e-11
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = -2
Query: 242 EDIGGLVNVKRELQESVQYPMEHPEKFEKFGMSPSKGVLFYGPP 111
+DIGG +++E V+ P+ HP+ F G+ P +G+L YGPP
Sbjct: 191 DDIGGCKKQLFQIRELVELPLRHPQLFSTVGVKPPRGILMYGPP 234
Score = 46.2 bits (108), Expect(2) = 2e-11
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = -1
Query: 135 RSSFLWTPPGCAKTLLAKAIANECQANFITVKGPELLTMWFGESE 1
R ++ PPG KTL+A+A+ANE A + GPE+++ GESE
Sbjct: 226 RGILMYGPPGSGKTLIARAVANEAGAFLFVINGPEIMSKLSGESE 270