BLASTX nr result
ID: Coptis23_contig00021208
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021208 (589 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-... 146 2e-33 emb|CBI33563.3| unnamed protein product [Vitis vinifera] 146 2e-33 emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera] 145 4e-33 dbj|BAA85457.1| S-locus protein 8 [Brassica rapa] 142 4e-32 emb|CAB89181.1| Fmt protein [Brassica napus var. napus] 139 5e-31 >ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera] Length = 365 Score = 146 bits (369), Expect = 2e-33 Identities = 70/97 (72%), Positives = 78/97 (80%) Frame = -2 Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406 VLHNKVRAFAGWPGTR KV +++ NGE N L+LKIITTR C S++Q +E DDV FI Sbjct: 263 VLHNKVRAFAGWPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 322 Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295 +LVFPC G SALEVLEVQLPGKKVV A FWNGLRGQ Sbjct: 323 ALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 359 >emb|CBI33563.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 146 bits (369), Expect = 2e-33 Identities = 70/97 (72%), Positives = 78/97 (80%) Frame = -2 Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406 VLHNKVRAFAGWPGTR KV +++ NGE N L+LKIITTR C S++Q +E DDV FI Sbjct: 290 VLHNKVRAFAGWPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 349 Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295 +LVFPC G SALEVLEVQLPGKKVV A FWNGLRGQ Sbjct: 350 ALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 386 >emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera] Length = 382 Score = 145 bits (367), Expect = 4e-33 Identities = 70/97 (72%), Positives = 77/97 (79%) Frame = -2 Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406 VLHNKVRAFAGWPGTR KV ++ NGE N L+LKIITTR C S++Q +E DDV FI Sbjct: 280 VLHNKVRAFAGWPGTRAKVVVIXDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 339 Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295 +LVFPC G SALEVLEVQLPGKKVV A FWNGLRGQ Sbjct: 340 ALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 376 >dbj|BAA85457.1| S-locus protein 8 [Brassica rapa] Length = 197 Score = 142 bits (358), Expect = 4e-32 Identities = 69/97 (71%), Positives = 78/97 (80%) Frame = -2 Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406 VLHNKVRAFAGWPGTR KV +L+ +G+ N LELKIITTR C ++V E+D VTF G Sbjct: 96 VLHNKVRAFAGWPGTRAKVLVLDDKSGQQNELELKIITTRICQSTEVLNGEQDYVTFKKG 155 Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295 SLVFPCGG +ALEVLEVQLPGKK + AT FWNGLRGQ Sbjct: 156 SLVFPCGGGTALEVLEVQLPGKKAIDATAFWNGLRGQ 192 >emb|CAB89181.1| Fmt protein [Brassica napus var. napus] Length = 354 Score = 139 bits (349), Expect = 5e-31 Identities = 67/97 (69%), Positives = 77/97 (79%) Frame = -2 Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406 +LHNKVRAFAGWPGTR KV +L+ +G+ N LELKIITTR C ++V E+D VTF G Sbjct: 253 ILHNKVRAFAGWPGTRAKVLVLDDKSGQQNELELKIITTRICQSTEVLNGEQDYVTFKKG 312 Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295 SLVF CGG +ALEVLEVQLPGKK + AT FWNGLRGQ Sbjct: 313 SLVFSCGGGTALEVLEVQLPGKKAIDATAFWNGLRGQ 349