BLASTX nr result

ID: Coptis23_contig00021208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021208
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-...   146   2e-33
emb|CBI33563.3| unnamed protein product [Vitis vinifera]              146   2e-33
emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera]   145   4e-33
dbj|BAA85457.1| S-locus protein 8 [Brassica rapa]                     142   4e-32
emb|CAB89181.1| Fmt protein [Brassica napus var. napus]               139   5e-31

>ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera]
          Length = 365

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/97 (72%), Positives = 78/97 (80%)
 Frame = -2

Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406
           VLHNKVRAFAGWPGTR KV +++  NGE N L+LKIITTR C  S++Q +E DDV FI  
Sbjct: 263 VLHNKVRAFAGWPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 322

Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295
           +LVFPC G SALEVLEVQLPGKKVV A  FWNGLRGQ
Sbjct: 323 ALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 359


>emb|CBI33563.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/97 (72%), Positives = 78/97 (80%)
 Frame = -2

Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406
           VLHNKVRAFAGWPGTR KV +++  NGE N L+LKIITTR C  S++Q +E DDV FI  
Sbjct: 290 VLHNKVRAFAGWPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 349

Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295
           +LVFPC G SALEVLEVQLPGKKVV A  FWNGLRGQ
Sbjct: 350 ALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 386


>emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera]
          Length = 382

 Score =  145 bits (367), Expect = 4e-33
 Identities = 70/97 (72%), Positives = 77/97 (79%)
 Frame = -2

Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406
           VLHNKVRAFAGWPGTR KV ++   NGE N L+LKIITTR C  S++Q +E DDV FI  
Sbjct: 280 VLHNKVRAFAGWPGTRAKVVVIXDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 339

Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295
           +LVFPC G SALEVLEVQLPGKKVV A  FWNGLRGQ
Sbjct: 340 ALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 376


>dbj|BAA85457.1| S-locus protein 8 [Brassica rapa]
          Length = 197

 Score =  142 bits (358), Expect = 4e-32
 Identities = 69/97 (71%), Positives = 78/97 (80%)
 Frame = -2

Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406
           VLHNKVRAFAGWPGTR KV +L+  +G+ N LELKIITTR C  ++V   E+D VTF  G
Sbjct: 96  VLHNKVRAFAGWPGTRAKVLVLDDKSGQQNELELKIITTRICQSTEVLNGEQDYVTFKKG 155

Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295
           SLVFPCGG +ALEVLEVQLPGKK + AT FWNGLRGQ
Sbjct: 156 SLVFPCGGGTALEVLEVQLPGKKAIDATAFWNGLRGQ 192


>emb|CAB89181.1| Fmt protein [Brassica napus var. napus]
          Length = 354

 Score =  139 bits (349), Expect = 5e-31
 Identities = 67/97 (69%), Positives = 77/97 (79%)
 Frame = -2

Query: 585 VLHNKVRAFAGWPGTRTKVRILNANNGEDNTLELKIITTRTCSLSDVQYDEKDDVTFIGG 406
           +LHNKVRAFAGWPGTR KV +L+  +G+ N LELKIITTR C  ++V   E+D VTF  G
Sbjct: 253 ILHNKVRAFAGWPGTRAKVLVLDDKSGQQNELELKIITTRICQSTEVLNGEQDYVTFKKG 312

Query: 405 SLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 295
           SLVF CGG +ALEVLEVQLPGKK + AT FWNGLRGQ
Sbjct: 313 SLVFSCGGGTALEVLEVQLPGKKAIDATAFWNGLRGQ 349


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