BLASTX nr result

ID: Coptis23_contig00021198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021198
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271314.1| PREDICTED: vacuolar protein 8 [Vitis vinifera]    206   5e-51
gb|AEE00747.1| armadillo repeat-containing protein [Gossypium hi...   190   4e-46
ref|XP_002321152.1| predicted protein [Populus trichocarpa] gi|2...   183   5e-44
ref|XP_002885801.1| armadillo/beta-catenin repeat family protein...   181   3e-43
ref|XP_002301599.1| predicted protein [Populus trichocarpa] gi|2...   180   5e-43

>ref|XP_002271314.1| PREDICTED: vacuolar protein 8 [Vitis vinifera]
          Length = 569

 Score =  206 bits (525), Expect = 5e-51
 Identities = 123/269 (45%), Positives = 152/269 (56%), Gaps = 1/269 (0%)
 Frame = -1

Query: 805 PTIPPSLTE-TFSTIHHXXXXXXXXXLTVKSFITKFQILRSKLTHLQTSLSQISDSTHWS 629
           P  P S ++ T   I           L+VKSFI ++Q+LRSKL+ LQ+S+ +ISDS HWS
Sbjct: 7   PASPSSTSKPTLEVITQLLSFLLLSSLSVKSFIGRWQVLRSKLSSLQSSIVEISDSPHWS 66

Query: 628 EXXXXXXXXXXXXXXXXXXXXXXXQCQNESSCYGKLRMQSDIDMATSSISAHSHDLDLLL 449
           E                       QC + +   GKL MQSD+DMA++S+S   HDLDLLL
Sbjct: 67  ENPLFQTLIPSLVSTLQRLKSLSDQCADSAYAGGKLLMQSDLDMASASLSKQLHDLDLLL 126

Query: 448 KSGVLRHTNAIVLSQPGPLSSKEDLGFFIRDLFARLQVGGFEFXXXXXXXXXXXXXXXXX 269
           +SGVLR +NAIVLSQPGP S+KEDLGFF+RDLF RLQ+GG EF                 
Sbjct: 127 RSGVLRQSNAIVLSQPGPGSAKEDLGFFVRDLFTRLQIGGIEFKKKALESLLQLLADDEK 186

Query: 268 SASLVAKEGDMRYLVHLLDSNHHSSVREQXXXXXXXXXXXXVFSRNCVFXXXXXXXXXXX 89
           +   VAKEG++ YLVHLLD N+H  +REQ              S  CVF           
Sbjct: 187 APVTVAKEGNIAYLVHLLDMNNHPCIREQAVTAISVLASASDQSIKCVFEEGGLGPLLRI 246

Query: 88  XXXXXXXLKEKAAMAIEAITSDPENAWAV 2
                  LKEKAA+A+EAIT+DPENAWAV
Sbjct: 247 LETGSVTLKEKAAIAVEAITADPENAWAV 275


>gb|AEE00747.1| armadillo repeat-containing protein [Gossypium hirsutum]
          Length = 570

 Score =  190 bits (483), Expect = 4e-46
 Identities = 111/242 (45%), Positives = 137/242 (56%)
 Frame = -1

Query: 727 TVKSFITKFQILRSKLTHLQTSLSQISDSTHWSEXXXXXXXXXXXXXXXXXXXXXXXQCQ 548
           TV+SF+ ++Q+LRSKL  LQ+SLS IS+S HW++                       QC 
Sbjct: 39  TVRSFVGRWQVLRSKLCSLQSSLSSISESPHWNDNSLLHNLFPSLLSTLQRLKALSDQCT 98

Query: 547 NESSCYGKLRMQSDIDMATSSISAHSHDLDLLLKSGVLRHTNAIVLSQPGPLSSKEDLGF 368
             S   GKL MQSD+DMA+SS+S H HDLDLLL+SGVL  +NAIVLS PGP S K+DLGF
Sbjct: 99  LSSFTGGKLLMQSDLDMASSSLSNHLHDLDLLLRSGVLHQSNAIVLSHPGPGSDKDDLGF 158

Query: 367 FIRDLFARLQVGGFEFXXXXXXXXXXXXXXXXXSASLVAKEGDMRYLVHLLDSNHHSSVR 188
           FIRDLF RLQ+GG EF                 S  LVAKEG++ YL+ LL++N    +R
Sbjct: 159 FIRDLFTRLQIGGIEFKKKALESLLQLLNDNEKSTPLVAKEGNVGYLISLLEANSQPLIR 218

Query: 187 EQXXXXXXXXXXXXVFSRNCVFXXXXXXXXXXXXXXXXXXLKEKAAMAIEAITSDPENAW 8
           EQ               R  VF                  LKEKAA+A+EAIT+DPEN W
Sbjct: 219 EQAVLAVSVLASSSEDLRKIVFEEGGLGPLLRILETGSIALKEKAAIAVEAITADPENTW 278

Query: 7   AV 2
           A+
Sbjct: 279 AI 280


>ref|XP_002321152.1| predicted protein [Populus trichocarpa] gi|222861925|gb|EEE99467.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score =  183 bits (465), Expect = 5e-44
 Identities = 112/243 (46%), Positives = 136/243 (55%), Gaps = 1/243 (0%)
 Frame = -1

Query: 727 TVKSFITKFQILRSKLTHLQTSLSQISDSTHWSEXXXXXXXXXXXXXXXXXXXXXXXQCQ 548
           TV+SFI ++Q+LR+KLT LQ+SLS +S+S  WS+                       QC 
Sbjct: 30  TVQSFIGRWQVLRTKLTSLQSSLSSLSESPLWSQNPLLHTLLPSLLSTLQRLLALSRQCS 89

Query: 547 NESSCYG-KLRMQSDIDMATSSISAHSHDLDLLLKSGVLRHTNAIVLSQPGPLSSKEDLG 371
           + SS  G KL  QSD+D+A+SS+S H HDLDLLL+SGVL H+NAI+LS PGP S KEDL 
Sbjct: 90  STSSLPGGKLLFQSDLDIASSSLSNHLHDLDLLLRSGVLHHSNAIILSHPGPGSDKEDLV 149

Query: 370 FFIRDLFARLQVGGFEFXXXXXXXXXXXXXXXXXSASLVAKEGDMRYLVHLLDSNHHSSV 191
           FFI DLF RLQVGG EF                 SASLV KEG++ YL  LLD N    +
Sbjct: 150 FFIHDLFTRLQVGGVEFKRKALESLLQILNTDKKSASLVVKEGNIGYLTGLLDFNDQPLI 209

Query: 190 REQXXXXXXXXXXXXVFSRNCVFXXXXXXXXXXXXXXXXXXLKEKAAMAIEAITSDPENA 11
           REQ              SR  +F                  LKEKAA+AIEAIT DP+N 
Sbjct: 210 REQAVSAVSILAASNDESRKIIFEEGGLGHLLRILETGSMPLKEKAAIAIEAITGDPDNG 269

Query: 10  WAV 2
           WA+
Sbjct: 270 WAI 272


>ref|XP_002885801.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331641|gb|EFH62060.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 578

 Score =  181 bits (458), Expect = 3e-43
 Identities = 115/269 (42%), Positives = 142/269 (52%)
 Frame = -1

Query: 808 PPTIPPSLTETFSTIHHXXXXXXXXXLTVKSFITKFQILRSKLTHLQTSLSQISDSTHWS 629
           PPT P  L      I +         LTV+SFI ++QILRSKL  L +SLS +S+S HWS
Sbjct: 15  PPTAP--LQPLLDLITNVLSLLLLSSLTVRSFIGRWQILRSKLFSLNSSLSSLSESPHWS 72

Query: 628 EXXXXXXXXXXXXXXXXXXXXXXXQCQNESSCYGKLRMQSDIDMATSSISAHSHDLDLLL 449
           +                       QC + S   GKL MQSD+D+A+SS+S H  DLDLLL
Sbjct: 73  QNPLLHTLLPSLLSNLQRLTSLSDQCSSASFSGGKLLMQSDLDIASSSLSTHISDLDLLL 132

Query: 448 KSGVLRHTNAIVLSQPGPLSSKEDLGFFIRDLFARLQVGGFEFXXXXXXXXXXXXXXXXX 269
           +SGVL   NAIVLS P P S K+D+ FFIRDLF RLQ+GG EF                 
Sbjct: 133 RSGVLHQQNAIVLSLPPPTSDKDDIAFFIRDLFTRLQIGGAEFKKKSLESLLQLLTDNEK 192

Query: 268 SASLVAKEGDMRYLVHLLDSNHHSSVREQXXXXXXXXXXXXVFSRNCVFXXXXXXXXXXX 89
           S+ ++AKEG++ YLV LLD +HH  +RE             V SR  VF           
Sbjct: 193 SSRIIAKEGNVGYLVTLLDLHHHPLIREHALAAVSLLTSSSVDSRKTVFEQGGLGPLLRL 252

Query: 88  XXXXXXXLKEKAAMAIEAITSDPENAWAV 2
                  LK +AA+AIEAIT DPE AWA+
Sbjct: 253 LETGSPPLKTRAAVAIEAITVDPETAWAI 281


>ref|XP_002301599.1| predicted protein [Populus trichocarpa] gi|222843325|gb|EEE80872.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  180 bits (456), Expect = 5e-43
 Identities = 108/243 (44%), Positives = 136/243 (55%), Gaps = 1/243 (0%)
 Frame = -1

Query: 727 TVKSFITKFQILRSKLTHLQTSLSQISDSTHWSEXXXXXXXXXXXXXXXXXXXXXXXQCQ 548
           TV+SFI ++Q+LR KLT LQ+SLS +SDS  W +                       QC 
Sbjct: 36  TVQSFIGRWQVLRPKLTSLQSSLSSLSDSPLWPQNPLLQTLLPSLLSTLQRLLSLSHQCS 95

Query: 547 NESSCYG-KLRMQSDIDMATSSISAHSHDLDLLLKSGVLRHTNAIVLSQPGPLSSKEDLG 371
           + SS  G KL  QSD+D+A+SS+S H HDL LLL+SGVL  +NAI+LS PGP S+KE+L 
Sbjct: 96  STSSFLGGKLLFQSDLDIASSSLSNHLHDLGLLLRSGVLHQSNAIILSHPGPGSNKEELV 155

Query: 370 FFIRDLFARLQVGGFEFXXXXXXXXXXXXXXXXXSASLVAKEGDMRYLVHLLDSNHHSSV 191
           FFI DLF RLQVGG EF                  ASLVAKEG++ YL+ LLD N+  S+
Sbjct: 156 FFIHDLFTRLQVGGAEFKRPALESLLQVLNEDQKLASLVAKEGNIGYLIGLLDFNNQPSI 215

Query: 190 REQXXXXXXXXXXXXVFSRNCVFXXXXXXXXXXXXXXXXXXLKEKAAMAIEAITSDPENA 11
           REQ              SR  +F                  ++EKAA+AIEAIT DP+N 
Sbjct: 216 REQAVSAVSILASSDGESRKIIFEEGGLGHLLRVLETGSMPVREKAAIAIEAITDDPDNG 275

Query: 10  WAV 2
           WA+
Sbjct: 276 WAI 278


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