BLASTX nr result

ID: Coptis23_contig00021166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021166
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38156.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_003633779.1| PREDICTED: uncharacterized protein LOC100855...    72   4e-11
emb|CBI21322.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002514872.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_002300125.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09

>emb|CBI38156.3| unnamed protein product [Vitis vinifera]
          Length = 946

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = -1

Query: 195 NKIDLPEDLLSFKSTDQQQQSLFKEEGLRGNSDQKVLVGFCDEQKDQFTSENSIPLSPQW 16
           +K+DLP+DL+S K +DQ   +     G  GN D+K L+G  DE KDQ  SE+SIPLSPQW
Sbjct: 4   SKLDLPDDLISTKPSDQFWTATVVASG--GNDDEKALMGLADESKDQLASESSIPLSPQW 61

Query: 15  LYAKP 1
           LY+KP
Sbjct: 62  LYSKP 66


>ref|XP_003633779.1| PREDICTED: uncharacterized protein LOC100855195 [Vitis vinifera]
          Length = 105

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/63 (60%), Positives = 44/63 (69%)
 Frame = -1

Query: 189 IDLPEDLLSFKSTDQQQQSLFKEEGLRGNSDQKVLVGFCDEQKDQFTSENSIPLSPQWLY 10
           ID P+DLLS K+ D+      K+E L G  D KVL+G  D  KDQ TSE+SIPLSPQWLY
Sbjct: 6   IDFPDDLLSTKAPDEHWTD--KDEVLGGKGDGKVLMGLLDGLKDQATSESSIPLSPQWLY 63

Query: 9   AKP 1
           AKP
Sbjct: 64  AKP 66


>emb|CBI21322.3| unnamed protein product [Vitis vinifera]
          Length = 1665

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/63 (60%), Positives = 44/63 (69%)
 Frame = -1

Query: 189 IDLPEDLLSFKSTDQQQQSLFKEEGLRGNSDQKVLVGFCDEQKDQFTSENSIPLSPQWLY 10
           ID P+DLLS K+ D+      K+E L G  D KVL+G  D  KDQ TSE+SIPLSPQWLY
Sbjct: 6   IDFPDDLLSTKAPDEHWTD--KDEVLGGKGDGKVLMGLLDGLKDQATSESSIPLSPQWLY 63

Query: 9   AKP 1
           AKP
Sbjct: 64  AKP 66


>ref|XP_002514872.1| conserved hypothetical protein [Ricinus communis]
           gi|223545923|gb|EEF47426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1590

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/66 (51%), Positives = 44/66 (66%)
 Frame = -1

Query: 198 NNKIDLPEDLLSFKSTDQQQQSLFKEEGLRGNSDQKVLVGFCDEQKDQFTSENSIPLSPQ 19
           + K+DLP+DLLS K +D    S   +    GN ++K+ V   DE KDQ  SE+SIPLSPQ
Sbjct: 3   DRKLDLPDDLLSSKPSDH---SFNPKVEASGNDEEKIHVALHDEAKDQLASESSIPLSPQ 59

Query: 18  WLYAKP 1
           WLY+KP
Sbjct: 60  WLYSKP 65


>ref|XP_002300125.1| predicted protein [Populus trichocarpa] gi|222847383|gb|EEE84930.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = -1

Query: 198 NNKIDLPEDLL--SFKSTDQQQQSLFKEEGLRGNSDQKVLVGFCDEQKDQFTSENSIPLS 25
           + K +LP+DLL  S KSTD++  S FK+ G  G  + K L+   D+ KDQ T++N+IPLS
Sbjct: 3   DGKPNLPDDLLLLSCKSTDERLSS-FKDRG--GIGEDKALLSLPDDSKDQVTADNTIPLS 59

Query: 24  PQWLYAKP 1
           PQWLYAKP
Sbjct: 60  PQWLYAKP 67


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