BLASTX nr result

ID: Coptis23_contig00021160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021160
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31708.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002279244.2| PREDICTED: uncharacterized protein LOC100253...    55   6e-06

>emb|CBI31708.3| unnamed protein product [Vitis vinifera]
          Length = 1570

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
 Frame = -3

Query: 397 GELSSSDNDEIPNTS-----ADVATPVEMNGGAVDKEKLISCNKGKLVPVNDPASSVDIR 233
           GELSSS++D +P++S          PVE    A   +       GK V VN+ A S+DI+
Sbjct: 36  GELSSSEDDGLPSSSPAPSVGATVPPVEPILVAPSNKNTQGTKAGKSVSVNNAAISIDIQ 95

Query: 232 LNTSVKQNSNMPFTRSLLPSKPVTHYSSAWYSPSASNHNLVIXXXXXXXXXXSQEHRRDS 53
             TS++ N +  F ++ +P K     SS WY P  SN+NLVI          S+E+ ++ 
Sbjct: 96  ARTSIQPNYHKGFEKNRVPFK---SGSSGWYGPPGSNNNLVISFSDNDSGSDSEEYGQEK 152

Query: 52  TS 47
            S
Sbjct: 153 AS 154


>ref|XP_002279244.2| PREDICTED: uncharacterized protein LOC100253034 [Vitis vinifera]
          Length = 2115

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
 Frame = -3

Query: 397 GELSSSDNDE-------IPNTS-----ADVATPVEMNGGAVDKEKLISCNKGKLVPVNDP 254
           GELSSS++D        +P++S          PVE    A   +       GK V VN+ 
Sbjct: 36  GELSSSEDDVSSPKTLGLPSSSPAPSVGATVPPVEPILVAPSNKNTQGTKAGKSVSVNNA 95

Query: 253 ASSVDIRLNTSVKQNSNMPFTRSLLPSKPVTHYSSAWYSPSASNHNLVIXXXXXXXXXXS 74
           A S+DI+  TS++ N +  F ++ +P K     SS WY P  SN+NLVI          S
Sbjct: 96  AISIDIQARTSIQPNYHKGFEKNRVPFK---SGSSGWYGPPGSNNNLVISFSDNDSGSDS 152

Query: 73  QEHRRDSTS 47
           +E+ ++  S
Sbjct: 153 EEYGQEKAS 161


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