BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021147
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29966.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...   178   5e-43
ref|XP_002531583.1| programmed cell death protein, putative [Ric...   176   2e-42
ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sat...   164   5e-39
gb|AAG51058.1|AC069473_20 rRNA biogenesis protein, putative, 3' ...   164   7e-39

>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/134 (67%), Positives = 111/134 (82%)
 Frame = +1

Query: 1   EYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPLHVQIGEIYDRSRIVRVDRGMGL 180
           +YNQ+KK+NARILFIDPSTRAVGLT+NPHLV+NKAPP  V+ G+IYD S+++RVDRG+GL
Sbjct: 361 DYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGDIYDHSKVIRVDRGLGL 420

Query: 181 LLDIPSAPVSTPGYVSIFDASDXXXXXXXXXXXXGNHVRVRIVGFRHLEEQAMGIMKASA 360
           LL++PS P STP YV++FD +D            G+HVRVRI+GFR+LE  AMG +KASA
Sbjct: 421 LLEVPSTPASTPTYVTLFDVADEEVRKMEKKYKEGSHVRVRILGFRNLEGLAMGTLKASA 480

Query: 361 FEGSVFTHSDVKPG 402
           FEGSVFTHSDVKPG
Sbjct: 481 FEGSVFTHSDVKPG 494


>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/134 (65%), Positives = 107/134 (79%)
 Frame = +1

Query: 1   EYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPLHVQIGEIYDRSRIVRVDRGMGL 180
           +YNQ+KK+NARILFIDPSTRAVGLT+NPHLV+NKAPP  V+ G+IYD S+++RVDRG+GL
Sbjct: 362 DYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGDIYDHSKVIRVDRGLGL 421

Query: 181 LLDIPSAPVSTPGYVSIFDASDXXXXXXXXXXXXGNHVRVRIVGFRHLEEQAMGIMKASA 360
           LL++PS P STP YV+  +               G+HVRVRI+GFR+LE  AMG +KASA
Sbjct: 422 LLEVPSTPASTPTYVTYKE---------------GSHVRVRILGFRNLEGLAMGTLKASA 466

Query: 361 FEGSVFTHSDVKPG 402
           FEGSVFTHSDVKPG
Sbjct: 467 FEGSVFTHSDVKPG 480


>ref|XP_002531583.1| programmed cell death protein, putative [Ricinus communis]
           gi|223528779|gb|EEF30786.1| programmed cell death
           protein, putative [Ricinus communis]
          Length = 607

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/134 (64%), Positives = 105/134 (78%)
 Frame = +1

Query: 1   EYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPLHVQIGEIYDRSRIVRVDRGMGL 180
           +YN +KK+NARILF+DPSTRAVGLT+N HLVHN APP HV++G+IYD +++VRVD+ MGL
Sbjct: 370 DYNNNKKVNARILFVDPSTRAVGLTLNQHLVHNHAPPTHVKVGDIYDGAKVVRVDKSMGL 429

Query: 181 LLDIPSAPVSTPGYVSIFDASDXXXXXXXXXXXXGNHVRVRIVGFRHLEEQAMGIMKASA 360
           LL+IPSAPVSTP YVS  +               G+ VRVRI+G+RHLE  A GI+KASA
Sbjct: 430 LLEIPSAPVSTPAYVSYKE---------------GSKVRVRILGYRHLEGLATGILKASA 474

Query: 361 FEGSVFTHSDVKPG 402
           FEG VFTHSDVKPG
Sbjct: 475 FEGPVFTHSDVKPG 488


>ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sativus]
          Length = 1898

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/133 (63%), Positives = 102/133 (76%)
 Frame = +1

Query: 4   YNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPLHVQIGEIYDRSRIVRVDRGMGLL 183
           YNQ+ KMNARILFIDPSTRAVGLT+ PHLV NKA P HV+IG+IYD +++VRVDRG GLL
Sbjct: 356 YNQNMKMNARILFIDPSTRAVGLTLIPHLVRNKAAPPHVRIGDIYDSAKVVRVDRGFGLL 415

Query: 184 LDIPSAPVSTPGYVSIFDASDXXXXXXXXXXXXGNHVRVRIVGFRHLEEQAMGIMKASAF 363
           L++PS+P STP +VS  +               G+ VRVRI+GFRHLE  A+G +KASAF
Sbjct: 416 LEVPSSPESTPTFVSFKE---------------GSRVRVRILGFRHLEGLAIGTLKASAF 460

Query: 364 EGSVFTHSDVKPG 402
           EG VF++SDVKPG
Sbjct: 461 EGPVFSYSDVKPG 473


>gb|AAG51058.1|AC069473_20 rRNA biogenesis protein, putative, 3' partial; 75505-85642
           [Arabidopsis thaliana]
          Length = 1396

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/134 (58%), Positives = 102/134 (76%)
 Frame = +1

Query: 1   EYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPLHVQIGEIYDRSRIVRVDRGMGL 180
           EYNQ+K +NARILFIDPS+RAVGLT++PH+V NKAPPLHV  G+I+D +++VR+D+  GL
Sbjct: 358 EYNQNKTVNARILFIDPSSRAVGLTLSPHVVCNKAPPLHVFSGDIFDEAKVVRIDKS-GL 416

Query: 181 LLDIPSAPVSTPGYVSIFDASDXXXXXXXXXXXXGNHVRVRIVGFRHLEEQAMGIMKASA 360
           LL++PS P  TP YVS +DA+             GNH+RVR++G + +E  A+G +K SA
Sbjct: 417 LLELPSKPTPTPAYVSTYDAAGDEVTKLEKKFKEGNHIRVRVLGLKQMEGLAVGTLKESA 476

Query: 361 FEGSVFTHSDVKPG 402
           FEG VFTHSDVKPG
Sbjct: 477 FEGPVFTHSDVKPG 490