BLASTX nr result

ID: Coptis23_contig00021139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021139
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533837.1| PREDICTED: uncharacterized protein LOC100781...    60   2e-07
gb|ACU19143.1| unknown [Glycine max]                                   57   2e-06
ref|NP_001239833.1| uncharacterized protein LOC100799271 [Glycin...    56   3e-06

>ref|XP_003533837.1| PREDICTED: uncharacterized protein LOC100781444 [Glycine max]
          Length = 337

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 52/138 (37%), Positives = 65/138 (47%), Gaps = 34/138 (24%)
 Frame = -2

Query: 386 VVSSHPIDKAVLISEEMIQVLEDNPAV---KTGDS-SVTGLLPEKNEDKLVLSRDAIVET 219
           V SS  I K V    E +Q +++N A+    TG     T L  EKNEDK   S D  V T
Sbjct: 203 VESSADIAKVVAAVPE-VQTIDNNNALLEKSTGSQVEATYLAVEKNEDKEHSSSDENVRT 261

Query: 218 S--DEPE----------------------------ESDSIEVPQNQELENVPFIQPLVQR 129
              +EP+                            +SD+ E   NQ L  V  + P+VQ+
Sbjct: 262 ISLEEPKPREFDSEVSASVSQSPIPESTIDAEHVKDSDTPECSDNQPL--VASVPPVVQK 319

Query: 128 TTWKSCCGLFDVLSGSNR 75
           T+W SCCGLFDVLSGSNR
Sbjct: 320 TSWLSCCGLFDVLSGSNR 337


>gb|ACU19143.1| unknown [Glycine max]
          Length = 337

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 51/138 (36%), Positives = 64/138 (46%), Gaps = 34/138 (24%)
 Frame = -2

Query: 386 VVSSHPIDKAVLISEEMIQVLEDNPAV---KTGDS-SVTGLLPEKNEDKLVLSRDAIVET 219
           V SS  I K V    E +Q +++N A+    TG     T L  EKNEDK   S D  V T
Sbjct: 203 VESSADIAKVVAAVPE-VQTIDNNNALLEKSTGSQVEATYLAVEKNEDKEHSSSDENVRT 261

Query: 218 S--DEPE----------------------------ESDSIEVPQNQELENVPFIQPLVQR 129
              +EP+                            +SD+ E   NQ L  V  + P+VQ+
Sbjct: 262 ISLEEPKPREFDSEVSASVSQSPIPESTIDAEHVKDSDTPECSDNQPL--VASVPPVVQK 319

Query: 128 TTWKSCCGLFDVLSGSNR 75
           T+W SCCGL DVLSGSNR
Sbjct: 320 TSWLSCCGLVDVLSGSNR 337


>ref|NP_001239833.1| uncharacterized protein LOC100799271 [Glycine max]
           gi|255634761|gb|ACU17742.1| unknown [Glycine max]
          Length = 315

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
 Frame = -2

Query: 401 SSTTEVVSSHPIDKAVLISEEMIQVLE-DNPAVKTGDSSVTGLLPEKNEDKLVLSRDAIV 225
           +S  EV S    DK     +E ++ +  + P  +  DS V+  + +    + ++  +  V
Sbjct: 215 ASVPEVQSVDNDDKEHSSFDENVRTISLEEPKPREFDSEVSASVSQSPIPESIIGAEH-V 273

Query: 224 ETSDEPEESDSIEVPQNQELENVPFIQPLVQRTTWKSCCGLFDVLSGSNR 75
           + SD PE SD+        L +VP   P+V++T+W SCCGLFDVLSGSNR
Sbjct: 274 KDSDTPECSDN-----QPPLASVP---PVVRKTSWLSCCGLFDVLSGSNR 315


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