BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021138
         (1263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...   417   e-114
ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   385   e-104
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...   383   e-104
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...   373   e-101

>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Vitis vinifera]
          Length = 641

 Score =  417 bits (1072), Expect = e-114
 Identities = 197/304 (64%), Positives = 246/304 (80%)
 Frame = +2

Query: 2    CSPDVVTYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDA 181
            CSPDV+TYNT+ING  R  E+DRG  +LKE+  +N LSPDVVTYTS+ISGYCKLG+M+ A
Sbjct: 268  CSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKA 327

Query: 182  SAVYDEMIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDG 361
            S +++ MI  GI+PN FT+N+LI+GFGK GDM SA  +Y+ ML++G  PD++T +SLIDG
Sbjct: 328  SILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDG 387

Query: 362  FCRTGKVDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKVIVPQ 541
             CRTGKV+ ++KLWH++  R +SPN YTFAIL N+ CKENRL EAR FLR LK + IV Q
Sbjct: 388  HCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQ 447

Query: 542  AFMYNPVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFN 721
             FMYNPVIDGFCKAGNVDEANVI+ EMEE RC PDK+TYTILIIGHCMKGR+ EA+SIFN
Sbjct: 448  PFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFN 507

Query: 722  KMLTSGCAPDDITVNSLRSCLLKAGMPNEAKQITLTVLNKDFDLNMPSSRKVQPLRQNMN 901
            +ML +GCAPD IT+ SL SCLLKAGMPNEA +I + + ++DF+L + S ++  PLR N +
Sbjct: 508  RMLGTGCAPDSITMTSLISCLLKAGMPNEAYRI-MQIASEDFNLGLKSLKRNVPLRTNTD 566

Query: 902  VSVA 913
            + VA
Sbjct: 567  IPVA 570



 Score =  118 bits (296), Expect = 3e-24
 Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 1/252 (0%)
 Frame = +2

Query: 20  TYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDASAVYDE 199
           TY+ ++  L      +  + V   M + +G SPD      ++S     G+ + A    D 
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNI-DGHSPDASVLGFLVSSATDAGKFNIARTWVD- 196

Query: 200 MIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDGFCRTGK 379
               G+  +L  YN L++   +   +  AV  +   + +    D  + + LI G CR GK
Sbjct: 197 ----GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGK 252

Query: 380 VDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLK-VIVPQAFMYN 556
           VD+A +L+++M     SP+  T+  LIN FC+ N +    D L++L  K  + P    Y 
Sbjct: 253 VDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYT 312

Query: 557 PVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFNKMLTS 736
            +I G+CK G +++A+++   M  +   P+  T+ ILI G    G M+ A +++ +ML  
Sbjct: 313 SIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLL 372

Query: 737 GCAPDDITVNSL 772
           GC PD IT  SL
Sbjct: 373 GCPPDIITFTSL 384



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
 Frame = +2

Query: 203 IDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPD----------------- 331
           ++L +  +  TY+ L+    + G   SA AVYD M + G+ PD                 
Sbjct: 129 VNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKF 188

Query: 332 -------------VVTLSSLIDGFCRTGKVDEAMKLWHDMGKRKVSPNAYTFAILINSFC 472
                        +V  + L++   R  +VDEA+  + +        ++ +F ILI   C
Sbjct: 189 NIARTWVDGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLC 248

Query: 473 KENRLSEARDFLRQLKLKVIVPQAFMYNPVIDGFCKAGNVDEANVIMTE-MEENRCNPDK 649
           +  ++ +A +   +++     P    YN +I+GFC+   VD  + ++ E + +N  +PD 
Sbjct: 249 RIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDV 308

Query: 650 LTYTILIIGHCMKGRMLEAVSIFNKMLTSGCAPDDITVNSLRSCLLKAG 796
           +TYT +I G+C  G+M +A  +FN M++SG  P+  T N L +   K G
Sbjct: 309 VTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVG 357


>ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|222833317|gb|EEE71794.1|
            predicted protein [Populus trichocarpa]
          Length = 512

 Score =  385 bits (989), Expect = e-104
 Identities = 185/305 (60%), Positives = 238/305 (78%)
 Frame = +2

Query: 2    CSPDVVTYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDA 181
            C PDVVTYNT+INGL +A E+ RG ++ KE+Q ++  SPD+VTYTS+ISG+CK G+M +A
Sbjct: 209  CLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEA 268

Query: 182  SAVYDEMIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDG 361
            S +++EM+  GI+PN+ T+NVLIDGFGK G++  A A+Y +M       DVVT +SLIDG
Sbjct: 269  SNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDG 328

Query: 362  FCRTGKVDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKVIVPQ 541
            +CR G+V+  +K W+ M  R VSP  YT+A+LIN+ CKENRL+EARDFL Q+K   I+P+
Sbjct: 329  YCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPK 388

Query: 542  AFMYNPVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFN 721
             FMYNPVIDGFCKAGNVDE NVI+ EMEE RC+PDK+T+TILIIGHC+KGRM EA++IFN
Sbjct: 389  PFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFN 448

Query: 722  KMLTSGCAPDDITVNSLRSCLLKAGMPNEAKQITLTVLNKDFDLNMPSSRKVQPLRQNMN 901
            +ML + CAPD+ITVNSL SCLLKAGMPNEA +I    L +D +L + S  K  PLR N +
Sbjct: 449  RMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMAL-EDRNLGLSSFEKAIPLRTNTD 507

Query: 902  VSVAV 916
            + VAV
Sbjct: 508  IPVAV 512



 Score =  116 bits (291), Expect = 1e-23
 Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 1/263 (0%)
 Frame = +2

Query: 20  TYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDASAVYDE 199
           TYN ++  L +    D    V   M   +G  PD      +++   +    D    +  E
Sbjct: 75  TYNLLMRSLCQMGHHDLVNIVFDYMG-SDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE 133

Query: 200 MIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDGFCRTGK 379
           +    +R N F YN L+    K   +  A+ ++   LVM   PD  T + LI G CR G 
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193

Query: 380 VDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKV-IVPQAFMYN 556
           VD A +++ DM      P+  T+  LIN  CK N +    +  ++++ +    P    Y 
Sbjct: 194 VDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYT 253

Query: 557 PVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFNKMLTS 736
            +I GFCK+G + EA+ +  EM  +   P+ +T+ +LI G    G + EA +++ KM   
Sbjct: 254 SIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYF 313

Query: 737 GCAPDDITVNSLRSCLLKAGMPN 805
            C+ D +T  SL     +AG  N
Sbjct: 314 DCSADVVTFTSLIDGYCRAGQVN 336



 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
 Frame = +2

Query: 203 IDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDGFCRTGKV 382
           ++L +     TYN+L+    + G       V+D M   G+ PD   L  L+    +    
Sbjct: 65  LNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDF 124

Query: 383 DEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKVIVPQAFMYNPV 562
           D   KL  ++  ++V  N++ +  L++   K+N++ EA    ++  +    P  + +N +
Sbjct: 125 DMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNIL 184

Query: 563 IDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFNKMLT-SG 739
           I G C+ G VD A  +  +ME   C PD +TY  LI G C    +     +F ++ + S 
Sbjct: 185 IRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSD 244

Query: 740 CAPDDITVNSLRSCLLKAGMPNEAKQI 820
           C+PD +T  S+ S   K+G   EA  +
Sbjct: 245 CSPDIVTYTSIISGFCKSGKMKEASNL 271


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score =  385 bits (988), Expect = e-104
 Identities = 186/306 (60%), Positives = 236/306 (77%), Gaps = 1/306 (0%)
 Frame = +2

Query: 2    CSPDVVTYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDA 181
            C PD+V+YNT+ING  R  EI +G  +LKE  L  G+SPDV+TYTS+ISGYCKLG M  A
Sbjct: 245  CFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAA 304

Query: 182  SAVYDEMIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDG 361
            S ++DEM+  GI+PN FT+NVLIDGFGK G+M SA+ +Y++ML++G  PDVVT +SLIDG
Sbjct: 305  SELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDG 364

Query: 362  FCRTGKVDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKVIVPQ 541
            +CR G+V++ +KLW +M  R +SPN YT+A+LIN+ CKENR+ EAR+FLR LK   +VP+
Sbjct: 365  YCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPK 424

Query: 542  AFMYNPVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFN 721
             F+YNPVIDGFCKAG VDEAN I+ EM+E +C PDK+T+TILIIG+CMKGRM+EA+S F 
Sbjct: 425  PFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFY 484

Query: 722  KMLTSGCAPDDITVNSLRSCLLKAGMPNEAKQITLTVLNKDFDLNMPSSRKVQPL-RQNM 898
            KM+   C PD+IT+NSL SCLLKAGMPNEA QI    L K   LN+  S    PL R++ 
Sbjct: 485  KMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK---LNLGLSSLGSPLTRKSS 541

Query: 899  NVSVAV 916
             V VAV
Sbjct: 542  RVPVAV 547



 Score =  141 bits (356), Expect = 3e-31
 Identities = 79/268 (29%), Positives = 140/268 (52%), Gaps = 1/268 (0%)
 Frame = +2

Query: 20  TYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDASAVYDE 199
           TY+ ++  L +    D  + V   M+  +G+ PD      ++S Y ++G++D A    +E
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMR-SDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 200 MIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDGFCRTGK 379
           +   GI+ + F YN L++   K   +  AV ++   L   + PDV + + LI G CR G+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229

Query: 380 VDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQ-LKLKVIVPQAFMYN 556
           +D+A + + +MG     P+  ++  LIN FC+ N +S+  D L++ + +K + P    Y 
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289

Query: 557 PVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFNKMLTS 736
            +I G+CK G++  A+ +  EM  +   P+  T+ +LI G    G M  A+ ++ KML  
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 737 GCAPDDITVNSLRSCLLKAGMPNEAKQI 820
           GC PD +T  SL     + G  N+  ++
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKL 377



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
 Frame = +2

Query: 209 LGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDGFCRTGKVDE 388
           L I     TY++L+    K G   SA  V+D M   G  PD   L  L+  + R GK+D 
Sbjct: 103 LSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDS 162

Query: 389 AMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKVIVPQAFMYNPVID 568
           A    +++    +  + + +  L+N   K+N + EA    R+      VP  + +N +I 
Sbjct: 163 AKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIR 222

Query: 569 GFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFNK-MLTSGCA 745
           G C+ G +D+A      M    C PD ++Y  LI G C    + +   +  + ML  G +
Sbjct: 223 GLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVS 282

Query: 746 PDDITVNSLRSCLLKAGMPNEAKQI 820
           PD IT  S+ S   K G    A ++
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASEL 307


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score =  383 bits (984), Expect = e-104
 Identities = 185/306 (60%), Positives = 235/306 (76%), Gaps = 1/306 (0%)
 Frame = +2

Query: 2    CSPDVVTYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDA 181
            C PD+V+YNT+ING  R  EI +G  +LKE  L  G+SPDV+TYTS+ISGYCKLG M  A
Sbjct: 245  CFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAA 304

Query: 182  SAVYDEMIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDG 361
            S ++DEM+  GI+PN FT+NVLIDGFGK G+M SA+ +Y++ML++G  PDVVT +SLIDG
Sbjct: 305  SELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDG 364

Query: 362  FCRTGKVDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKVIVPQ 541
            +CR G+V++ +KLW +M  R +SPN YT+A+LIN+ CKENR+ EAR+FLR LK   +VP+
Sbjct: 365  YCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPK 424

Query: 542  AFMYNPVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFN 721
             F+YNPVIDGFCKAG VDEAN I+ EM+E +C PDK+T+TILIIG+CMKGRM+EA+S F 
Sbjct: 425  PFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFY 484

Query: 722  KMLTSGCAPDDITVNSLRSCLLKAGMPNEAKQITLTVLNKDFDLNMPSSRKVQPL-RQNM 898
            KM+   C PD+IT+NSL SCLLKAGMPNEA QI    L K   LN+  S    PL R++ 
Sbjct: 485  KMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK---LNLGLSSLGSPLTRKSS 541

Query: 899  NVSVAV 916
             V  AV
Sbjct: 542  RVPAAV 547



 Score =  141 bits (356), Expect = 3e-31
 Identities = 79/268 (29%), Positives = 140/268 (52%), Gaps = 1/268 (0%)
 Frame = +2

Query: 20  TYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDASAVYDE 199
           TY+ ++  L +    D  + V   M+  +G+ PD      ++S Y ++G++D A    +E
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMR-SDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 200 MIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDGFCRTGK 379
           +   GI+ + F YN L++   K   +  AV ++   L   + PDV + + LI G CR G+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229

Query: 380 VDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQ-LKLKVIVPQAFMYN 556
           +D+A + + +MG     P+  ++  LIN FC+ N +S+  D L++ + +K + P    Y 
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289

Query: 557 PVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFNKMLTS 736
            +I G+CK G++  A+ +  EM  +   P+  T+ +LI G    G M  A+ ++ KML  
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 737 GCAPDDITVNSLRSCLLKAGMPNEAKQI 820
           GC PD +T  SL     + G  N+  ++
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKL 377



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
 Frame = +2

Query: 209 LGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDGFCRTGKVDE 388
           L I     TY++L+    K G   SA  V+D M   G  PD   L  L+  + R GK+D 
Sbjct: 103 LSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDS 162

Query: 389 AMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKVIVPQAFMYNPVID 568
           A    +++    +  + + +  L+N   K+N + EA    R+      VP  + +N +I 
Sbjct: 163 AKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIR 222

Query: 569 GFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFNK-MLTSGCA 745
           G C+ G +D+A      M    C PD ++Y  LI G C    + +   +  + ML  G +
Sbjct: 223 GLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVS 282

Query: 746 PDDITVNSLRSCLLKAGMPNEAKQI 820
           PD IT  S+ S   K G    A ++
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASEL 307


>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score =  373 bits (957), Expect = e-101
 Identities = 180/304 (59%), Positives = 236/304 (77%)
 Frame = +2

Query: 2    CSPDVVTYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDA 181
            C PDVVTYNT+I+GL +A E+DR   +LKE+Q +N  SPDV+TYTS+ISG+ KLG+++ A
Sbjct: 229  CLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAA 288

Query: 182  SAVYDEMIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDG 361
            S +++EMI  GI P + T+NVLIDGFGK G+M +A A++++M      PDVVT +SLIDG
Sbjct: 289  SVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDG 348

Query: 362  FCRTGKVDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLKVIVPQ 541
            +CRTG +   +K+W  M  R VSPN YT++++IN+ CK+NR+ EARD LRQLK   + P+
Sbjct: 349  YCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPK 408

Query: 542  AFMYNPVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFN 721
             F+YNPVIDGFCKAGNVDEANVI+TEMEE RC PDK+T+TILIIGHCMKGRM+EA+ IF 
Sbjct: 409  PFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFK 468

Query: 722  KMLTSGCAPDDITVNSLRSCLLKAGMPNEAKQITLTVLNKDFDLNMPSSRKVQPLRQNMN 901
            KML  GCAPD+IT++SL +CLLKAG P+EA  I  T  ++D +L+  S RK  P+R   +
Sbjct: 469  KMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTA-SEDLNLSFSSLRKTFPMRVKTD 527

Query: 902  VSVA 913
            +SVA
Sbjct: 528  ISVA 531



 Score =  108 bits (270), Expect = 3e-21
 Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
 Frame = +2

Query: 20  TYNTIINGLFRAKEIDRGRQVLKEMQLQNGLSPDVVTYTSVISGYCKLGRMDDASAVYDE 199
           TY  +I  L +    D    V+  M+  +G   D      +++ + + G+ D A  +  E
Sbjct: 95  TYELLIRSLCQMGLHDLVEMVIGYMR-SDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIE 153

Query: 200 MIDLGIRPNLFTYNVLIDGFGKTGDMGSAVAVYDRMLVMGYHPDVVTLSSLIDGFCRTGK 379
           +     R + F YN L++   K G +  A+ ++   L     P+  T + LI G CR G+
Sbjct: 154 VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGE 213

Query: 380 VDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQLKLK-VIVPQAFMYN 556
           V++  +L++ M      P+  T+  LI+  CK N L  A D L++++ +    P    Y 
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273

Query: 557 PVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRMLEAVSIFNKMLTS 736
            +I GF K G ++ A+V+  EM  +   P  +T+ +LI G    G M+ A ++  KM + 
Sbjct: 274 SIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASY 333

Query: 737 GCAPDDITVNSL 772
            C PD +T  SL
Sbjct: 334 SCIPDVVTFTSL 345



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 44/169 (26%), Positives = 76/169 (44%)
 Frame = +2

Query: 338 TLSSLIDGFCRTGKVDEAMKLWHDMGKRKVSPNAYTFAILINSFCKENRLSEARDFLRQL 517
           T   LI   C+ G  D    +   M       ++     L+ SF +  +   A+  + ++
Sbjct: 95  TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEV 154

Query: 518 KLKVIVPQAFMYNPVIDGFCKAGNVDEANVIMTEMEENRCNPDKLTYTILIIGHCMKGRM 697
           + +     +F+YN +++   K G V EA  +  E       P+  T+ ILI G C  G +
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214

Query: 698 LEAVSIFNKMLTSGCAPDDITVNSLRSCLLKAGMPNEAKQITLTVLNKD 844
            +   +FN M + GC PD +T N+L S L KA   + A  +   V +++
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRN 263