BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021110
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   113   5e-23
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   109   8e-22
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   107   4e-21
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   106   7e-21
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    99   2e-18

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  113 bits (283), Expect = 5e-23
 Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 24/299 (8%)
 Frame = +1

Query: 1    CRGSSHGWLVLVNKDCTDIRLFNPFFSVNNQIQLPPLPLIHN-----EDETRG----EFY 153
            C GS +GWLV +  D  D+ L NP   V  QI LP L    N     +  T+G    + +
Sbjct: 1006 CWGSPYGWLVTIGTDL-DMCLLNPLTRV--QILLPSLRACPNLNTLIDSSTQGSRSKDIF 1062

Query: 154  ITRAVLSANPSSNPNYVVMVQYGTKG-LAFFKPGSETWSVPDLDDNYFSDVIYYNDQLYA 330
            I +AVLS+ PSS P+  VM+ Y   G LAF KPG +TW++ + +     D+IY+N    A
Sbjct: 1063 IYKAVLSSAPSS-PDCAVMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLA 1121

Query: 331  VTWNGQLFSCDVNHPRPYLFHVAQSPS----GSFEMKFVYLLVSSGELLLIKKRLYVKCS 498
            V  + +++ CD++  +      A +P+       E +  YL+ S GE+ ++ + LY    
Sbjct: 1122 VNLSWEVWICDISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTAR 1181

Query: 499  TYL----TARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXXYFPGCKLNCIYFT 666
              +    T    + KLD+   +W E++     + FL            +P  + N IYFT
Sbjct: 1182 RDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFT 1241

Query: 667  HESLECDPSGDLTDFCTNFKGDQLYDMEDWNIKG----HYPFKYE--MKFPNPIWIEPT 825
                         D+C      + +DM  +N +     HYP  ++    F  P+WI P+
Sbjct: 1242 ------------DDYCGFLNIPRNFDMGIYNFQNTQIEHYPVGHDALSMFSAPLWIRPS 1288


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  109 bits (273), Expect = 8e-22
 Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 39/312 (12%)
 Frame = +1

Query: 4   RGSSHGWLVLVNKDCTDIRLFNPFFSVNNQIQLPPLPLIHN------------------- 126
           RGSSHGWL++++ +  +I L NP     +++ LPPL    N                   
Sbjct: 90  RGSSHGWLLILD-EAPEIFLLNPL--TRSKVHLPPLSTFPNVVRFNFADVGREYALRTSS 146

Query: 127 -EDETRG-----EFYITRAVLSANPSSNPNYVVMVQYGTKG-LAFFKPGSETWSVPDLDD 285
            +  TR      + +I + +LS++P++  +++ +V     G LA  +   ++W+  +   
Sbjct: 147 GDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQ 206

Query: 286 NYFSDVIYYNDQLYAVTWNGQLFSCDV--NHPRPYLFHVAQSPSGSFEMKFVYLLVSSGE 459
           +Y  DVI++    YAV   G +  CDV  + PR  +  + Q   G  +    YL+ S  E
Sbjct: 207 SYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQ----YLVESGEE 262

Query: 460 LLLIKKRLYVKCST--------YLTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXX 615
           LLL+ + L +            Y T R ++ +LDL   +W  +     +ALFL       
Sbjct: 263 LLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLS 322

Query: 616 XXXXYFPGCKLNCIYFTHESLECDPSGDLTDFCTNFKGDQ---LYDMEDWNIKGHYPFKY 786
                FPGCK NCIY+T +  E +  G          G+Q   ++++ED +I+      +
Sbjct: 323 LSSVDFPGCKGNCIYYTDDYSEDNYDG--------IGGEQDLGIFNLEDGSIEPLPCSHF 374

Query: 787 EMKFPNPIWIEP 822
            +++P P+W+ P
Sbjct: 375 RIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  107 bits (267), Expect = 4e-21
 Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
 Frame = +1

Query: 4   RGSSHGWLVLVNKDCTDIRLFNPFFSVNNQIQLPPLPLIHN------------------- 126
           RGSSHGWL++++ +  +I L NP     +++ LPPL    N                   
Sbjct: 90  RGSSHGWLLILD-EAPEIFLLNPL--TRSKVHLPPLSTFPNVVRFNFADVGREYALRTSS 146

Query: 127 -EDETRG-----EFYITRAVLSANPSSNPNYVVMVQYGTKG-LAFFKPGSETWSVPDLDD 285
            +  TR      + +I + +LS++P++  +++ +V     G LA  +   ++W+  +   
Sbjct: 147 GDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQ 206

Query: 286 NYFSDVIYYNDQLYAVTWNGQLFSCDV--NHPRPYLFHVAQSPSGSFEMKFVYLLVSSGE 459
           +Y  DVI++    YAV   G +  CDV  + PR  +  + Q   G  +    YL+ S  E
Sbjct: 207 SYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQ----YLVESGEE 262

Query: 460 LLLIKKRLYVKCST--------YLTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXX 615
           LLL+ + L +            Y T R ++ +LD    +W  +     +ALFL       
Sbjct: 263 LLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLS 322

Query: 616 XXXXYFPGCKLNCIYFTHESLECDPSGDLTDFCTNFKGDQ---LYDMEDWNIKGHYPFKY 786
                FPGCK NCIY+T +  E +  G          G+Q   ++++ED +I+      +
Sbjct: 323 LSSVDFPGCKGNCIYYTDDYSEDNYDG--------IGGEQDLGIFNLEDGSIEPLPCSHF 374

Query: 787 EMKFPNPIWIEP 822
            +++P P+W+ P
Sbjct: 375 RIRWPPPLWVTP 386


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  106 bits (265), Expect = 7e-21
 Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 40/312 (12%)
 Frame = +1

Query: 7   GSSHGWLVLVNKDCTDIRLFNPFFSVNNQIQLPPLP-----LIHNEDETRGEF------- 150
           GSSHGWL++++ D   I L NP      ++ LPPL      +  N  +   E+       
Sbjct: 94  GSSHGWLMILD-DTPTILLINPL--TRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLG 150

Query: 151 -------------YITRAVLSANPSSNPNYVVM-VQYGTKGLAFFKPGSETWSVPDLDDN 288
                        +I + VLS++P  + N+VV+ +   T  LA+ + G ++WS+ +   +
Sbjct: 151 ERVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARS 210

Query: 289 YFSDVIYYNDQLYAVTWNGQLFSCDVNHPRPYLFHVAQSPSGSFEMKFVYLLVSSGELLL 468
           +  DVI+ N   YAV   GQ+  CD++   P +  +        +M+  YL+ S  ELLL
Sbjct: 211 FCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQ--YLVNSGDELLL 268

Query: 469 IKKRLYVKCS----------TYLTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXX 618
           + + L ++             Y T R E+F+LD  G +W+ +     +ALF+        
Sbjct: 269 VTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSL 328

Query: 619 XXXYFPGCKLNCIYFTHESLECDPSGDLTDFCTNFKGDQLYDMEDWNIK--GHYP--FKY 786
               F GC  NCIY+T + L+ +  G   D         ++ + D  I+    YP  F  
Sbjct: 329 SATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLG-----IFKLCDETIEPLPCYPRNFTS 383

Query: 787 EMKFPNPIWIEP 822
            +++  P+W+ P
Sbjct: 384 PLQWSPPLWVSP 395


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 85/309 (27%), Positives = 137/309 (44%), Gaps = 37/309 (11%)
 Frame = +1

Query: 7   GSSHGWLVLVNKDCTDIRLFNPFFSVNNQIQLPPLP-----------------LIHNEDE 135
           GSSHGWL++++ D   I + NP      +I LP +                  L+ N   
Sbjct: 93  GSSHGWLIILD-DSPSILVINPL--TRRKIHLPAISSFPNVVSFDYANVGREYLLVNPQG 149

Query: 136 TRG--------EFYITRAVLSANPSSNPN--YVVM-VQYGTKGLAFFKPGSETWSVPDLD 282
            R         + +I + V+S++P       +V M +   T  LA+ K G E W++ +  
Sbjct: 150 ERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNIVENS 209

Query: 283 DNYFSDVIYYNDQLYAVTWNGQLFSCDVNHPRPYLFHVAQSPSGSFEMKFVYLLVSSGE- 459
            ++  DVIY+N   YAV   GQ+  CDVN   P +  +        +M++   LVSSG+ 
Sbjct: 210 RSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPRQIGGDMQY---LVSSGDG 266

Query: 460 LLLIKKRLYVKCS----TYLTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXX 627
           LLL+ + L +        Y TAR E+FKLDL G +W  +       LF+           
Sbjct: 267 LLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSAS 326

Query: 628 YFPGCKLNCIYFTHESLECDPSGDLTDFCTNFKGDQLYDMEDWNIK--GHYPFK--YEMK 795
              GC  +CIY+T +    +  G + +         ++ + D +I+    YP      ++
Sbjct: 327 GLSGCMGDCIYYTDDYSANNYDGHIGEHDLG-----IFKLSDGSIEPLPCYPRNSYSRLQ 381

Query: 796 FPNPIWIEP 822
           +P P+WI P
Sbjct: 382 WPPPLWISP 390