BLASTX nr result

ID: Coptis23_contig00021096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021096
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    82   6e-14
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    76   2e-12
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    74   9e-12
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/132 (34%), Positives = 69/132 (52%)
 Frame = -2

Query: 427 CRWKFPPVGCIKLNTDGSMTQLSVGYGGIAIDHQGNVIFTYTGGGFKRSVIFQELKAIKI 248
           C WK P VG IKLNTDGS+ +   G+GG+  D++GN I  +        +   EL AI  
Sbjct: 272 CIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWR 331

Query: 247 GLMLCKQKGYLRVSLCSDSLRAVQILKGTEESPWHCSNTIASIKEIVALLEDVTFTHVYR 68
           GL+L    G   + + SDS+ AV+ +   +      +  +  I  ++   E+   +H +R
Sbjct: 332 GLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWR 391

Query: 67  EVNKTADYLASL 32
           E NK ADYL+ +
Sbjct: 392 ETNKAADYLSKM 403


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/136 (30%), Positives = 69/136 (50%)
 Frame = -2

Query: 421 WKFPPVGCIKLNTDGSMTQLSVGYGGIAIDHQGNVIFTYTGGGFKRSVIFQELKAIKIGL 242
           W+ P  G  KLNTDGS+ + + G+GG+  DH G+ I  Y     +  +   EL AI  GL
Sbjct: 268 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 327

Query: 241 MLCKQKGYLRVSLCSDSLRAVQILKGTEESPWHCSNTIASIKEIVALLEDVTFTHVYREV 62
           +L    G   + + SDS+ AV+ +   +       + +  I  ++   E    +H +RE 
Sbjct: 328 VLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRET 387

Query: 61  NKTADYLASLSTSTDE 14
           NK AD+L+ +  S ++
Sbjct: 388 NKAADFLSKMDLSGND 403


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/133 (30%), Positives = 66/133 (49%)
 Frame = -2

Query: 421 WKFPPVGCIKLNTDGSMTQLSVGYGGIAIDHQGNVIFTYTGGGFKRSVIFQELKAIKIGL 242
           W+ P  G  KLNTDGS+ + + G+GG+  DH G+ I  Y     +  +   EL AI  GL
Sbjct: 155 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 214

Query: 241 MLCKQKGYLRVSLCSDSLRAVQILKGTEESPWHCSNTIASIKEIVALLEDVTFTHVYREV 62
           +L    G   + + SDS+  V+ +   +       + +  I  ++   E    +H +RE 
Sbjct: 215 VLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRET 274

Query: 61  NKTADYLASLSTS 23
           NK AD+L+ +  S
Sbjct: 275 NKAADFLSRMDLS 287


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/137 (31%), Positives = 65/137 (47%)
 Frame = -2

Query: 427 CRWKFPPVGCIKLNTDGSMTQLSVGYGGIAIDHQGNVIFTYTGGGFKRSVIFQELKAIKI 248
           C+WK P  G IKLNTDGS+   + G GG+  D++GN I  +        +   EL AI  
Sbjct: 165 CQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWR 224

Query: 247 GLMLCKQKGYLRVSLCSDSLRAVQILKGTEESPWHCSNTIASIKEIVALLEDVTFTHVYR 68
           GL+L        + + SDSL  V  +   +         +  I+ ++   +    +H +R
Sbjct: 225 GLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWR 284

Query: 67  EVNKTADYLASLSTSTD 17
           E N+ ADYLA +    D
Sbjct: 285 ETNRAADYLAKMVVERD 301


>ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|222865680|gb|EEF02811.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 52/145 (35%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
 Frame = -2

Query: 430 QCRWKFPPVGCIKLNTDGSMTQLS--VGYGGIAIDHQGNVIFTYTGGGFKRSV-----IF 272
           Q  WK+P    IKLN DG         G GG+  +H G  I     GGF R++     + 
Sbjct: 73  QVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIREHLGAWI-----GGFARNIDICSSVN 127

Query: 271 QELKAIKIGLMLCKQKGYLRVSLCSDSLRAVQILKGTEESPWHCSNTIASIKEIVALLED 92
            EL A+ +GL L   +G+ +V L SDS   V ++ G         N I  IK+++    +
Sbjct: 128 AELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKDMLGRDWE 187

Query: 91  VTFTHVYREVNKTADYLASLSTSTD 17
           VT  HVYRE N  AD+LA+   S D
Sbjct: 188 VTTYHVYREANCVADWLANYGLSRD 212


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