BLASTX nr result

ID: Coptis23_contig00021093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021093
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...    97   1e-18
ref|XP_002883939.1| hypothetical protein ARALYDRAFT_899844 [Arab...    91   1e-16
dbj|BAE98846.1| hypothetical protein [Arabidopsis thaliana]            91   1e-16
ref|NP_849997.2| CLIP-associated protein [Arabidopsis thaliana] ...    91   1e-16
ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...    90   2e-16

>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +1

Query: 1   STELPLQGVILPPILQMLNDSNHSVREAAVLFIEEMYAQVGSQFREELQRRHLPSSMI 174
           STELPLQ VILPPILQMLNDSNH VREAA+L IEEMY Q G QFR+ELQR HLP+SM+
Sbjct: 151 STELPLQRVILPPILQMLNDSNHGVREAAILCIEEMYTQAGPQFRDELQRHHLPTSML 208


>ref|XP_002883939.1| hypothetical protein ARALYDRAFT_899844 [Arabidopsis lyrata subsp.
           lyrata] gi|297329779|gb|EFH60198.1| hypothetical protein
           ARALYDRAFT_899844 [Arabidopsis lyrata subsp. lyrata]
          Length = 1439

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/68 (67%), Positives = 54/68 (79%)
 Frame = +1

Query: 1   STELPLQGVILPPILQMLNDSNHSVREAAVLFIEEMYAQVGSQFREELQRRHLPSSMILN 180
           STELPLQ VIL PILQMLND N +VREAA+L IEEMY Q GSQFREELQR HLPS M+ +
Sbjct: 151 STELPLQRVILAPILQMLNDPNQAVREAAILCIEEMYMQGGSQFREELQRHHLPSYMVKD 210

Query: 181 FWSKISML 204
             +++  +
Sbjct: 211 INARLERI 218


>dbj|BAE98846.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1031

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/68 (67%), Positives = 54/68 (79%)
 Frame = +1

Query: 1   STELPLQGVILPPILQMLNDSNHSVREAAVLFIEEMYAQVGSQFREELQRRHLPSSMILN 180
           STELPLQ VIL PILQMLND N +VREAA+L IEEMY Q GSQFREELQR HLPS M+ +
Sbjct: 151 STELPLQRVILAPILQMLNDPNQAVREAAILCIEEMYMQGGSQFREELQRHHLPSYMVKD 210

Query: 181 FWSKISML 204
             +++  +
Sbjct: 211 INARLERI 218


>ref|NP_849997.2| CLIP-associated protein [Arabidopsis thaliana]
           gi|20259452|gb|AAM13846.1| unknown protein [Arabidopsis
           thaliana] gi|330251886|gb|AEC06980.1| CLIP-associated
           protein [Arabidopsis thaliana]
          Length = 1439

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/68 (67%), Positives = 54/68 (79%)
 Frame = +1

Query: 1   STELPLQGVILPPILQMLNDSNHSVREAAVLFIEEMYAQVGSQFREELQRRHLPSSMILN 180
           STELPLQ VIL PILQMLND N +VREAA+L IEEMY Q GSQFREELQR HLPS M+ +
Sbjct: 151 STELPLQRVILAPILQMLNDPNQAVREAAILCIEEMYMQGGSQFREELQRHHLPSYMVKD 210

Query: 181 FWSKISML 204
             +++  +
Sbjct: 211 INARLERI 218


>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
           gi|223539723|gb|EEF41305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1384

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/68 (64%), Positives = 53/68 (77%)
 Frame = +1

Query: 1   STELPLQGVILPPILQMLNDSNHSVREAAVLFIEEMYAQVGSQFREELQRRHLPSSMILN 180
           STELPLQ  ILPPILQMLND N  VREAA+L IEEMY+Q G QFR+ELQR HLP SM+ +
Sbjct: 89  STELPLQRAILPPILQMLNDPNPGVREAAILCIEEMYSQAGPQFRDELQRHHLPMSMMKD 148

Query: 181 FWSKISML 204
             +++  +
Sbjct: 149 INARLEKI 156


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