BLASTX nr result

ID: Coptis23_contig00021057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021057
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332407.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-61
ref|XP_003527422.1| PREDICTED: protein Mpv17-like [Glycine max]       241   2e-61
ref|XP_003607501.1| Protein Mpv17 [Medicago truncatula] gi|35550...   239   8e-61
ref|XP_002456297.1| hypothetical protein SORBIDRAFT_03g033650 [S...   238   1e-60
ref|XP_002881872.1| peroxisomal membrane 22 kDa family protein [...   238   1e-60

>ref|XP_002332407.1| predicted protein [Populus trichocarpa] gi|222832340|gb|EEE70817.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  241 bits (616), Expect = 1e-61
 Identities = 113/187 (60%), Positives = 139/187 (74%), Gaps = 13/187 (6%)
 Frame = +3

Query: 123 FPFKQAATAASLTLTGDSIAQLTSRWKTIPPG-------------SDNKDIMATLLSNYD 263
           FP KQA TA +L LTGD++AQ+T RWK   P              +DN+D +   LS++D
Sbjct: 45  FPLKQAVTAGALALTGDTVAQVTDRWKKNKPSKRHSYDQDASQNSNDNQDFIGIFLSDHD 104

Query: 264 WIRALRMTSYGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAW 443
           W+RALRMTSYGFLLYGPGS AWY+YLD  LPK TV+             GPS+IAV+FAW
Sbjct: 105 WLRALRMTSYGFLLYGPGSYAWYQYLDCCLPKQTVKNLMLKVLLNQIVLGPSVIAVVFAW 164

Query: 444 NNLWKGRLSELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFY 623
           NNLW+G+LS+LP+ YQ+DALPTLLYGFRFW+PVSVLNFW +P+QARVA+MST SIFWNF 
Sbjct: 165 NNLWQGKLSQLPEKYQRDALPTLLYGFRFWIPVSVLNFWAVPIQARVAFMSTGSIFWNFC 224

Query: 624 LSTAMSK 644
           LS+ ++K
Sbjct: 225 LSSTLNK 231


>ref|XP_003527422.1| PREDICTED: protein Mpv17-like [Glycine max]
          Length = 217

 Score =  241 bits (614), Expect = 2e-61
 Identities = 114/178 (64%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
 Frame = +3

Query: 117 FKFPFKQAATAASLTLTGDSIAQLTSRWKTIPPG--SDNKDIMATLLSNYDWIRALRMTS 290
           ++FP KQA TAASL LTGD+IAQL+ RW+    G  S ++D +   LS++DW+RALRMTS
Sbjct: 40  YRFPVKQAVTAASLALTGDTIAQLSHRWRKAKEGGGSVSQDELWRYLSDHDWLRALRMTS 99

Query: 291 YGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAWNNLWKGRLS 470
           YGFLLYGPGS AWY+ LD  LPKPTV+             GP +IAV+FAWNNLW  +LS
Sbjct: 100 YGFLLYGPGSYAWYQCLDHCLPKPTVQNLVLKVVLNQIVLGPCVIAVVFAWNNLWLQKLS 159

Query: 471 ELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFYLSTAMSK 644
           ELP+ Y++DALPTLLYGFRFW+PVSVLNFWV+PLQARVA+MS  S+FWNFYLS+ M+K
Sbjct: 160 ELPEKYRRDALPTLLYGFRFWIPVSVLNFWVVPLQARVAFMSMGSVFWNFYLSSTMTK 217


>ref|XP_003607501.1| Protein Mpv17 [Medicago truncatula] gi|355508556|gb|AES89698.1|
           Protein Mpv17 [Medicago truncatula]
          Length = 219

 Score =  239 bits (609), Expect = 8e-61
 Identities = 114/183 (62%), Positives = 139/183 (75%), Gaps = 2/183 (1%)
 Frame = +3

Query: 102 AVVSKFKFPFKQAATAASLTLTGDSIAQLTSRWKTIPPGSDN--KDIMATLLSNYDWIRA 275
           AV   ++FP KQA TAASLTLTGD+IAQL++RW       +N  +D+++ LLS +D +RA
Sbjct: 37  AVGGGYQFPLKQALTAASLTLTGDTIAQLSNRWNKAKESGENASQDVLSKLLSEHDLLRA 96

Query: 276 LRMTSYGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAWNNLW 455
           LRMTSYGFL YGPGS AWY+ LD  LPKP V+             GP +IAVIFAWNNLW
Sbjct: 97  LRMTSYGFLFYGPGSFAWYQLLDHCLPKPNVQNLMLKVLLNQVVLGPCVIAVIFAWNNLW 156

Query: 456 KGRLSELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFYLSTA 635
           + +LSELP+ Y++DALPTLLYGFRFW+PVSVLNFWV+PL ARV +MS  SIFWNFYLS+ 
Sbjct: 157 QQKLSELPEKYKRDALPTLLYGFRFWIPVSVLNFWVVPLPARVGFMSMGSIFWNFYLSST 216

Query: 636 MSK 644
           M+K
Sbjct: 217 MNK 219


>ref|XP_002456297.1| hypothetical protein SORBIDRAFT_03g033650 [Sorghum bicolor]
           gi|241928272|gb|EES01417.1| hypothetical protein
           SORBIDRAFT_03g033650 [Sorghum bicolor]
          Length = 241

 Score =  238 bits (608), Expect = 1e-60
 Identities = 115/178 (64%), Positives = 135/178 (75%), Gaps = 3/178 (1%)
 Frame = +3

Query: 120 KFPFKQAATAASLTLTGDSIAQLTSRW---KTIPPGSDNKDIMATLLSNYDWIRALRMTS 290
           +FPF+QA TAASLT TGD+IAQ+ SR    +     SD K+++  +L N+DWIRALRM S
Sbjct: 64  EFPFRQAVTAASLTFTGDTIAQVRSRIVDRRRCCADSDTKELIPDILLNHDWIRALRMAS 123

Query: 291 YGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAWNNLWKGRLS 470
           YGFLLYGPGS AWY+ LDR +PK T               GP +IAVIFAWNNLW G+LS
Sbjct: 124 YGFLLYGPGSYAWYQLLDRCMPKQTFVNLSAKVILNQIVLGPCVIAVIFAWNNLWLGKLS 183

Query: 471 ELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFYLSTAMSK 644
           ELP  YQ DALPTLLYGF+FW+PVS++NFWVIPL ARVA+MS+CSIFWNFYLST MSK
Sbjct: 184 ELPAKYQNDALPTLLYGFKFWIPVSIVNFWVIPLPARVAFMSSCSIFWNFYLSTTMSK 241


>ref|XP_002881872.1| peroxisomal membrane 22 kDa family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327711|gb|EFH58131.1| peroxisomal
           membrane 22 kDa family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 232

 Score =  238 bits (607), Expect = 1e-60
 Identities = 115/181 (63%), Positives = 136/181 (75%), Gaps = 5/181 (2%)
 Frame = +3

Query: 117 FKFPFKQAATAASLTLTGDSIAQLTSRWK---TIPPGSDNKDI--MATLLSNYDWIRALR 281
           ++FP KQA TA +LT TGD+IAQL+ RWK    +   S   D   +  + S +DWIRALR
Sbjct: 52  YRFPLKQAVTAGALTFTGDTIAQLSGRWKKRTALKQSSSELDEGELWNIFSEHDWIRALR 111

Query: 282 MTSYGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAWNNLWKG 461
           M+SYGFLLYGPGS AWY++LD +LPKPT               GPS+IAVIFAWNNLW G
Sbjct: 112 MSSYGFLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFAWNNLWLG 171

Query: 462 RLSELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFYLSTAMS 641
           +LSEL + YQKDALPTLLYGFRFWVPVS+LNFWV+PLQARVA+MS  S+FWNFYLS+ MS
Sbjct: 172 KLSELGNKYQKDALPTLLYGFRFWVPVSILNFWVVPLQARVAFMSMGSVFWNFYLSSTMS 231

Query: 642 K 644
           K
Sbjct: 232 K 232


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