BLASTX nr result

ID: Coptis23_contig00021046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021046
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...   194   8e-48
emb|CBI24130.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...   192   2e-47
ref|XP_004161392.1| PREDICTED: LOW QUALITY PROTEIN: nuclear-pore...   182   3e-44

>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score =  194 bits (492), Expect = 8e-48
 Identities = 101/158 (63%), Positives = 117/158 (74%)
 Frame = +1

Query: 1   ELRRRHAEVEEDLSNKLADVERQFNECSRSLRWNKERVKELEEKLTSLQEELCSSKETNG 180
           ELRR H E+E D+S K +DVER+ NECS SL+WNKERVKELE KLTS+Q+ELCSSK+   
Sbjct: 209 ELRRTHVELEADMSTKHSDVERRLNECSSSLKWNKERVKELEMKLTSMQQELCSSKDAAA 268

Query: 181 ENEARFSAEISTVTKLVELYKESSEEWSRKAGELEGVIKALEMHLSQLESDYKEKLQKEE 360
            NE R SAEI TV KLVELYKESSEEWSRKAGELEGVIKALE HL Q+E+DYKE+L+KE 
Sbjct: 269 ANEQRLSAEIMTVNKLVELYKESSEEWSRKAGELEGVIKALETHLIQVENDYKERLEKEV 328

Query: 361 SARKMHXXXXXXXXXXXXXXXXXIENHRKANELSLLPI 474
            ARK                   +E  R+ANEL+LLP+
Sbjct: 329 FARKELEKEAADLKGKLEKCEAEMETSRRANELNLLPL 366


>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score =  194 bits (492), Expect = 8e-48
 Identities = 101/158 (63%), Positives = 117/158 (74%)
 Frame = +1

Query: 1   ELRRRHAEVEEDLSNKLADVERQFNECSRSLRWNKERVKELEEKLTSLQEELCSSKETNG 180
           ELRR H E+E D+S K +DVER+ NECS SL+WNKERVKELE KLTS+Q+ELCSSK+   
Sbjct: 209 ELRRTHVELEADMSTKHSDVERRLNECSSSLKWNKERVKELEMKLTSMQQELCSSKDAAA 268

Query: 181 ENEARFSAEISTVTKLVELYKESSEEWSRKAGELEGVIKALEMHLSQLESDYKEKLQKEE 360
            NE R SAEI TV KLVELYKESSEEWSRKAGELEGVIKALE HL Q+E+DYKE+L+KE 
Sbjct: 269 ANEQRLSAEIMTVNKLVELYKESSEEWSRKAGELEGVIKALETHLIQVENDYKERLEKEV 328

Query: 361 SARKMHXXXXXXXXXXXXXXXXXIENHRKANELSLLPI 474
            ARK                   +E  R+ANEL+LLP+
Sbjct: 329 FARKELEKEAADLKGKLEKCEAEMETSRRANELNLLPL 366


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
           predicted protein [Populus trichocarpa]
          Length = 2052

 Score =  193 bits (491), Expect = 1e-47
 Identities = 103/158 (65%), Positives = 120/158 (75%)
 Frame = +1

Query: 1   ELRRRHAEVEEDLSNKLADVERQFNECSRSLRWNKERVKELEEKLTSLQEELCSSKETNG 180
           ELRRRHA++EED+S KLAD ER+FNE S S + + ERVKELE KLTS+QEELCSS++   
Sbjct: 209 ELRRRHADLEEDVSTKLADAERRFNESSSSSKRSMERVKELELKLTSVQEELCSSRDAAA 268

Query: 181 ENEARFSAEISTVTKLVELYKESSEEWSRKAGELEGVIKALEMHLSQLESDYKEKLQKEE 360
            NE R SAE+STV KLVELYKESSEEWS+KAGELEGVIKALE HLSQ+E+DYKE+L+KE 
Sbjct: 269 ANEERLSAELSTVNKLVELYKESSEEWSQKAGELEGVIKALETHLSQVENDYKERLEKEI 328

Query: 361 SARKMHXXXXXXXXXXXXXXXXXIENHRKANELSLLPI 474
           SARK                   IE+ RK NELSLLP+
Sbjct: 329 SARKQLEKEAGDLKDKLERCEADIESSRKTNELSLLPL 366


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
           gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
           [Ricinus communis]
          Length = 2095

 Score =  192 bits (489), Expect = 2e-47
 Identities = 98/158 (62%), Positives = 120/158 (75%)
 Frame = +1

Query: 1   ELRRRHAEVEEDLSNKLADVERQFNECSRSLRWNKERVKELEEKLTSLQEELCSSKETNG 180
           +LRR HA+++E++S KLADV+R+ NECS SL+WNKERVKELE KL S+QEELCS ++   
Sbjct: 209 KLRRTHADLDEEMSAKLADVKRRSNECSSSLKWNKERVKELEIKLASMQEELCSHRDAAA 268

Query: 181 ENEARFSAEISTVTKLVELYKESSEEWSRKAGELEGVIKALEMHLSQLESDYKEKLQKEE 360
            NE RFSAEIST+ KLVELYKESSEEWS+KAGELEGVIKALE HL+Q+E+DYKE+L KE 
Sbjct: 269 ANEERFSAEISTINKLVELYKESSEEWSKKAGELEGVIKALETHLNQVENDYKERLDKEI 328

Query: 361 SARKMHXXXXXXXXXXXXXXXXXIENHRKANELSLLPI 474
            AR                    +E+ RKANEL+LLP+
Sbjct: 329 CARNQLQKEAADLKNKLANCEAEVESGRKANELNLLPL 366


>ref|XP_004161392.1| PREDICTED: LOW QUALITY PROTEIN: nuclear-pore anchor-like [Cucumis
           sativus]
          Length = 1827

 Score =  182 bits (461), Expect = 3e-44
 Identities = 97/158 (61%), Positives = 112/158 (70%)
 Frame = +1

Query: 1   ELRRRHAEVEEDLSNKLADVERQFNECSRSLRWNKERVKELEEKLTSLQEELCSSKETNG 180
           +LRR H++ E +LS KL DVERQ +EC+ SL+WNK+ VKELE KLTS QEELCSS+    
Sbjct: 210 DLRRLHSDTEAELSAKLRDVERQLDECASSLKWNKDSVKELEMKLTSAQEELCSSRRMAS 269

Query: 181 ENEARFSAEISTVTKLVELYKESSEEWSRKAGELEGVIKALEMHLSQLESDYKEKLQKEE 360
           ENE R  AEISTV KLVELYKESSEEWS+KA ELEGV+KALE HL+Q+ESDYKEKL KEE
Sbjct: 270 ENEERLCAEISTVNKLVELYKESSEEWSKKATELEGVVKALETHLNQIESDYKEKLVKEE 329

Query: 361 SARKMHXXXXXXXXXXXXXXXXXIENHRKANELSLLPI 474
           S R                    IE  RK NEL+L P+
Sbjct: 330 SQRIHLEEEATNLKVKLEKCEAEIELSRKKNELTLFPL 367


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