BLASTX nr result

ID: Coptis23_contig00021043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021043
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544212.1| PREDICTED: uncharacterized protein LOC100803...    90   3e-16
ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263...    89   5e-16
emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]    89   5e-16
ref|XP_002316275.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15
ref|XP_002531574.1| conserved hypothetical protein [Ricinus comm...    85   1e-14

>ref|XP_003544212.1| PREDICTED: uncharacterized protein LOC100803152 [Glycine max]
           gi|255645311|gb|ACU23152.1| unknown [Glycine max]
          Length = 81

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +2

Query: 251 EKEGSKGCSTSSCP-MKNSSSKRRNSFVRKCASLVKEQRARFYIMRRCVTMLICWQDYSD 427
           +KEGS    +SS P +KNSSS+RR +F  KCA LVKEQRARFYIMRRCVTMLICW+DYSD
Sbjct: 21  KKEGSTRSRSSSTPFIKNSSSQRRCAFASKCARLVKEQRARFYIMRRCVTMLICWRDYSD 80

Query: 428 S 430
           S
Sbjct: 81  S 81


>ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263265 [Vitis vinifera]
          Length = 83

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/60 (71%), Positives = 53/60 (88%)
 Frame = +2

Query: 251 EKEGSKGCSTSSCPMKNSSSKRRNSFVRKCASLVKEQRARFYIMRRCVTMLICWQDYSDS 430
           +KEGS+  S++S P+  +SS+RR SF RKCASLVKEQRARFYI+RRCVTMLICW++YSDS
Sbjct: 25  KKEGSRSRSSTS-PLMRNSSQRRCSFTRKCASLVKEQRARFYIVRRCVTMLICWREYSDS 83


>emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]
          Length = 82

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/60 (71%), Positives = 53/60 (88%)
 Frame = +2

Query: 251 EKEGSKGCSTSSCPMKNSSSKRRNSFVRKCASLVKEQRARFYIMRRCVTMLICWQDYSDS 430
           +KEGS+  S++S P+  +SS+RR SF RKCASLVKEQRARFYI+RRCVTMLICW++YSDS
Sbjct: 24  KKEGSRSRSSTS-PLMRNSSQRRCSFTRKCASLVKEQRARFYIVRRCVTMLICWREYSDS 82


>ref|XP_002316275.1| predicted protein [Populus trichocarpa] gi|222865315|gb|EEF02446.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 40/60 (66%), Positives = 48/60 (80%)
 Frame = +2

Query: 251 EKEGSKGCSTSSCPMKNSSSKRRNSFVRKCASLVKEQRARFYIMRRCVTMLICWQDYSDS 430
           +KEGS    +S+  +   SS+RR SF RKCA LVKEQRARFYI+RRCVTMLICW+DYSD+
Sbjct: 25  KKEGSSRSRSSTSSLMKDSSQRRCSFTRKCARLVKEQRARFYIVRRCVTMLICWRDYSDA 84


>ref|XP_002531574.1| conserved hypothetical protein [Ricinus communis]
           gi|223528804|gb|EEF30810.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
 Frame = +2

Query: 251 EKEGSKGC--STSSCPMKNSSS--KRRNSFVRKCASLVKEQRARFYIMRRCVTMLICWQD 418
           +KEGS     S++S  MKNSSS  +RR SF RKCA LVKEQRARFYI+RRCVTMLICW+D
Sbjct: 25  KKEGSSRSVRSSTSPLMKNSSSSSQRRCSFTRKCARLVKEQRARFYIVRRCVTMLICWRD 84

Query: 419 YSDS 430
           YSDS
Sbjct: 85  YSDS 88


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