BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021040
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533149.1| catalytic, putative [Ricinus communis] gi|22...   194   8e-48
ref|XP_002311170.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
ref|XP_002283725.1| PREDICTED: ribosomal RNA large subunit methy...   193   2e-47
ref|XP_003616405.1| Ribosomal RNA large subunit methyltransferas...   172   3e-41
ref|XP_004147696.1| PREDICTED: probable dual-specificity RNA met...   171   7e-41

>ref|XP_002533149.1| catalytic, putative [Ricinus communis] gi|223527044|gb|EEF29230.1|
           catalytic, putative [Ricinus communis]
          Length = 420

 Score =  194 bits (493), Expect = 8e-48
 Identities = 93/115 (80%), Positives = 105/115 (91%)
 Frame = +2

Query: 188 VDPHVLLGMSEQDLQQLAIDFGQQSYRGKQLHHLLYKTKAKEIQDFSHLPQAFRNDLQEA 367
           VDPHVLLGMSE +LQQLA DFGQQSYRGKQLHHL+Y+ K KEIQDFS LPQAFRN+LQEA
Sbjct: 53  VDPHVLLGMSEPELQQLAADFGQQSYRGKQLHHLIYQRKVKEIQDFSQLPQAFRNELQEA 112

Query: 368 GYKVGRSPIHQVVTAADGTIKALIKLEDNRLIETVGIPVEDSKGSSRLTACVSSQ 532
           G++VGRSPI++ VTAADGT+K LIKLEDNRLIETVGIP++D KG  RLTAC+SSQ
Sbjct: 113 GWRVGRSPIYRTVTAADGTVKLLIKLEDNRLIETVGIPIQDEKGPVRLTACISSQ 167


>ref|XP_002311170.1| predicted protein [Populus trichocarpa] gi|222850990|gb|EEE88537.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  194 bits (492), Expect = 1e-47
 Identities = 96/115 (83%), Positives = 102/115 (88%)
 Frame = +2

Query: 188 VDPHVLLGMSEQDLQQLAIDFGQQSYRGKQLHHLLYKTKAKEIQDFSHLPQAFRNDLQEA 367
           VDPHVLLGMSE +LQQLA D GQQSYRGKQLHHL+Y+ K KEIQDFS LP  FRNDLQEA
Sbjct: 50  VDPHVLLGMSEPELQQLATDLGQQSYRGKQLHHLIYQRKVKEIQDFSQLPLVFRNDLQEA 109

Query: 368 GYKVGRSPIHQVVTAADGTIKALIKLEDNRLIETVGIPVEDSKGSSRLTACVSSQ 532
           G+KVGRSPI Q VTAADGT+K LI+LEDNRLIETVGIPVED KGS RLTACVSSQ
Sbjct: 110 GWKVGRSPIFQTVTAADGTVKLLIRLEDNRLIETVGIPVEDEKGSMRLTACVSSQ 164


>ref|XP_002283725.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
           vinifera] gi|296086245|emb|CBI31686.3| unnamed protein
           product [Vitis vinifera]
          Length = 407

 Score =  193 bits (490), Expect = 2e-47
 Identities = 104/155 (67%), Positives = 115/155 (74%), Gaps = 4/155 (2%)
 Frame = +2

Query: 80  CCAPLTRVM----LRSSSRTICXXXXXXXXXXXXXXXXXHVDPHVLLGMSEQDLQQLAID 247
           C APLTR +    L  SSRT+                  HVD HVLLGMSEQ+LQQL++D
Sbjct: 8   CSAPLTRAIRSRSLALSSRTMSTTLSPTRVA--------HVDSHVLLGMSEQELQQLSLD 59

Query: 248 FGQQSYRGKQLHHLLYKTKAKEIQDFSHLPQAFRNDLQEAGYKVGRSPIHQVVTAADGTI 427
            GQQSYRGKQLHHL+YK K KEIQ FS LPQAFRNDLQE G++VGRS I+Q VTAADGT+
Sbjct: 60  LGQQSYRGKQLHHLIYKRKVKEIQHFSQLPQAFRNDLQEGGWRVGRSSIYQSVTAADGTV 119

Query: 428 KALIKLEDNRLIETVGIPVEDSKGSSRLTACVSSQ 532
           K LIKL DNRL+ETVGIPVE  KGS RLTACVSSQ
Sbjct: 120 KLLIKLADNRLVETVGIPVEHDKGSFRLTACVSSQ 154


>ref|XP_003616405.1| Ribosomal RNA large subunit methyltransferase N [Medicago
           truncatula] gi|355517740|gb|AES99363.1| Ribosomal RNA
           large subunit methyltransferase N [Medicago truncatula]
          Length = 431

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/111 (73%), Positives = 98/111 (88%)
 Frame = +2

Query: 200 VLLGMSEQDLQQLAIDFGQQSYRGKQLHHLLYKTKAKEIQDFSHLPQAFRNDLQEAGYKV 379
           VLLG+SE +LQ+LA+DFGQQ +RGKQL+HL+YK K K+IQ+F+ +PQAFRN+L+EAG+KV
Sbjct: 43  VLLGLSETELQKLALDFGQQGFRGKQLYHLIYKRKVKDIQEFTQVPQAFRNELEEAGWKV 102

Query: 380 GRSPIHQVVTAADGTIKALIKLEDNRLIETVGIPVEDSKGSSRLTACVSSQ 532
           GRSPI   V A DGT+K L+KLEDNRLIETVGIPVED KGS RLTACVSSQ
Sbjct: 103 GRSPIFNTVVATDGTVKLLLKLEDNRLIETVGIPVEDEKGSVRLTACVSSQ 153


>ref|XP_004147696.1| PREDICTED: probable dual-specificity RNA methyltransferase
           RlmN-like [Cucumis sativus]
          Length = 425

 Score =  171 bits (433), Expect = 7e-41
 Identities = 81/115 (70%), Positives = 102/115 (88%), Gaps = 2/115 (1%)
 Frame = +2

Query: 194 PHVLLGMSEQDLQQLAIDFGQQSYRGKQLHHLLYKTKAKEIQDFSHLPQAFRNDLQEAGY 373
           P VL+G+S+Q+LQQLA+DFGQ+ YRGKQLH L+YK K KE+++F++LP  FR DLQEAG+
Sbjct: 49  PKVLIGLSDQELQQLALDFGQEKYRGKQLHQLIYKRKVKEVEEFTNLPLKFRTDLQEAGW 108

Query: 374 KVGRSPIHQVVTAADGTIKALIKLEDNRLIETVGIPVED--SKGSSRLTACVSSQ 532
           +VGRSP++Q VTAADGT+K L+KL+DNRLIETVGIPVED  +KGS RLTAC+SSQ
Sbjct: 109 RVGRSPVYQSVTAADGTVKLLLKLDDNRLIETVGIPVEDKNNKGSVRLTACISSQ 163