BLASTX nr result

ID: Coptis23_contig00021028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021028
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37658.1| integrase [Populus trichocarpa]                        114   8e-24
ref|XP_003516563.1| PREDICTED: uncharacterized protein LOC100818...   111   5e-23
ref|XP_003545234.1| PREDICTED: uncharacterized protein LOC100776...   111   7e-23
ref|XP_003543910.1| PREDICTED: uncharacterized protein LOC100777...   111   7e-23
ref|XP_003520862.1| PREDICTED: uncharacterized protein LOC100811...   111   7e-23

>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/78 (69%), Positives = 64/78 (82%)
 Frame = +3

Query: 3    FNFDMRRAGSQRKLQLNELAELRNEAYENAKIYKERTKIFHDKSILRKSFEPNQKVLLYN 182
            FN ++  A   RKLQ+NEL E+RN+AYEN+KI+K R K FHDK ILRK+F+  QKVLLYN
Sbjct: 920  FNSNLDDASQLRKLQINELEEIRNDAYENSKIHKARIKEFHDKKILRKTFDVGQKVLLYN 979

Query: 183  SRLRLFPGKLRSRWTGPF 236
            SRL LFPGKLRSRW+GPF
Sbjct: 980  SRLHLFPGKLRSRWSGPF 997


>ref|XP_003516563.1| PREDICTED: uncharacterized protein LOC100818308 [Glycine max]
          Length = 1463

 Score =  111 bits (278), Expect = 5e-23
 Identities = 49/77 (63%), Positives = 63/77 (81%)
 Frame = +3

Query: 6    NFDMRRAGSQRKLQLNELAELRNEAYENAKIYKERTKIFHDKSILRKSFEPNQKVLLYNS 185
            NFD    G +RKLQL EL E+R  AYE+++IYKERTK +HDK + R+ F+P Q+VLL+NS
Sbjct: 944  NFDKNACGEKRKLQLQELEEMRLNAYESSRIYKERTKAYHDKKLQRREFQPGQQVLLFNS 1003

Query: 186  RLRLFPGKLRSRWTGPF 236
            RLRLFPGKL+S+W+GPF
Sbjct: 1004 RLRLFPGKLKSKWSGPF 1020


>ref|XP_003545234.1| PREDICTED: uncharacterized protein LOC100776961 [Glycine max]
          Length = 1663

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/77 (63%), Positives = 63/77 (81%)
 Frame = +3

Query: 6    NFDMRRAGSQRKLQLNELAELRNEAYENAKIYKERTKIFHDKSILRKSFEPNQKVLLYNS 185
            NFD    G +RKLQL EL E+R  AYE+++IYKERTK +HDK + R+ F+P Q+VLL+NS
Sbjct: 1535 NFDNNACGEKRKLQLQELEEMRLNAYESSRIYKERTKAYHDKKLQRREFQPGQQVLLFNS 1594

Query: 186  RLRLFPGKLRSRWTGPF 236
            RLRLFPGKL+S+W+GPF
Sbjct: 1595 RLRLFPGKLKSKWSGPF 1611


>ref|XP_003543910.1| PREDICTED: uncharacterized protein LOC100777299 [Glycine max]
          Length = 1658

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/77 (63%), Positives = 63/77 (81%)
 Frame = +3

Query: 6    NFDMRRAGSQRKLQLNELAELRNEAYENAKIYKERTKIFHDKSILRKSFEPNQKVLLYNS 185
            NFD    G +RKLQL EL E+R  AYE+++IYKERTK +HDK + R+ F+P Q+VLL+NS
Sbjct: 1530 NFDNNACGEKRKLQLQELEEMRLNAYESSRIYKERTKAYHDKKLQRREFQPGQQVLLFNS 1589

Query: 186  RLRLFPGKLRSRWTGPF 236
            RLRLFPGKL+S+W+GPF
Sbjct: 1590 RLRLFPGKLKSKWSGPF 1606


>ref|XP_003520862.1| PREDICTED: uncharacterized protein LOC100811416 [Glycine max]
          Length = 2098

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/77 (63%), Positives = 63/77 (81%)
 Frame = +3

Query: 6    NFDMRRAGSQRKLQLNELAELRNEAYENAKIYKERTKIFHDKSILRKSFEPNQKVLLYNS 185
            NFD    G +RKLQL EL E+R  AYE+++IYKERTK +HDK + R+ F+P Q+VLL+NS
Sbjct: 1535 NFDNNACGEKRKLQLQELEEMRLNAYESSRIYKERTKAYHDKKLQRREFQPGQQVLLFNS 1594

Query: 186  RLRLFPGKLRSRWTGPF 236
            RLRLFPGKL+S+W+GPF
Sbjct: 1595 RLRLFPGKLKSKWSGPF 1611


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