BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021019
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   253   2e-65
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   253   3e-65
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   248   8e-64
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   237   2e-60
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   233   2e-59

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  253 bits (647), Expect = 2e-65
 Identities = 120/229 (52%), Positives = 166/229 (72%)
 Frame = -3

Query: 688 LYSKVGQYEKLDTLMEEMKENGVHPDKFTLSIRMSAYVANSDIEGLEKVLRSMEVDPNII 509
           LYS++G++EKLD LM+EM+ENG+  D FT  IR++AY A SD+EG+EK+L  +E DP + 
Sbjct: 179 LYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVN 238

Query: 508 VDWNCYVIAANGYIKVGLIDKALEILKKSEKLITWKQQRVAYVSLLTGYTRARSKEDLYR 329
            DWN Y++AANGY+K  L +KA+E+LKKSE+ I+ + +R  Y  LLT Y    +K ++YR
Sbjct: 239 SDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEVYR 298

Query: 328 IWKMYKSSVKLNSKAYICMIGSLLKLGDIAGAEKILEEWESGNNSYDFRVPNLLVVAYCK 149
           IW +YK+  K  +  Y+ M+ SLLKL D+ GAEK  EEW SGN  +DFRVPNLL+ AYCK
Sbjct: 299 IWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCK 358

Query: 148 SGLVEKAEKLMNVTIEKGEKPFLSSWDHLATGYVEANHLPKALKAMESA 2
            GL+EKAE+L++  IE+GE+P   +WD LA GY E N + KA+  ++ A
Sbjct: 359 KGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKA 407


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  253 bits (645), Expect = 3e-65
 Identities = 120/229 (52%), Positives = 165/229 (72%)
 Frame = -3

Query: 688 LYSKVGQYEKLDTLMEEMKENGVHPDKFTLSIRMSAYVANSDIEGLEKVLRSMEVDPNII 509
           LYS++G++EKLD LM+EM+ENG+  D FT  IR++AY A SD+EG+EK+L  +E DP + 
Sbjct: 179 LYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVN 238

Query: 508 VDWNCYVIAANGYIKVGLIDKALEILKKSEKLITWKQQRVAYVSLLTGYTRARSKEDLYR 329
            DWN Y++AANGY+K  L +KA+E+LKKSE+ I+ + +R  Y  LLT Y    +K + YR
Sbjct: 239 SDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEXYR 298

Query: 328 IWKMYKSSVKLNSKAYICMIGSLLKLGDIAGAEKILEEWESGNNSYDFRVPNLLVVAYCK 149
           IW +YK+  K  +  Y+ M+ SLLKL D+ GAEK  EEW SGN  +DFRVPNLL+ AYCK
Sbjct: 299 IWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCK 358

Query: 148 SGLVEKAEKLMNVTIEKGEKPFLSSWDHLATGYVEANHLPKALKAMESA 2
            GL+EKAE+L++  IE+GE+P   +WD LA GY E N + KA+  ++ A
Sbjct: 359 KGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKA 407


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  248 bits (633), Expect = 8e-64
 Identities = 117/229 (51%), Positives = 163/229 (71%)
 Frame = -3

Query: 688 LYSKVGQYEKLDTLMEEMKENGVHPDKFTLSIRMSAYVANSDIEGLEKVLRSMEVDPNII 509
           +Y ++G +EKLD LM EM+E G+  DKFTL+IR+SAY A S+I G++ ++  ME DP II
Sbjct: 193 VYYRMGNWEKLDILMHEMEEKGIFCDKFTLAIRLSAYAAASNIVGIDNIVTRMESDPRII 252

Query: 508 VDWNCYVIAANGYIKVGLIDKALEILKKSEKLITWKQQRVAYVSLLTGYTRARSKEDLYR 329
           +DWN Y + A+GY+KVGL+DK L ++KK E+LI  K   VA+ +LL  Y   R +++L R
Sbjct: 253 LDWNSYAVVAHGYLKVGLVDKTLVMMKKLEELIDAKGSNVAFDNLLKLYAETRQRDELDR 312

Query: 328 IWKMYKSSVKLNSKAYICMIGSLLKLGDIAGAEKILEEWESGNNSYDFRVPNLLVVAYCK 149
           +W +YK   K+ +K Y+ MI SLLK  DI  AEK+LEEWES   SYDFRVPN L+ AYC+
Sbjct: 313 VWMLYKKKEKIYNKGYMAMISSLLKFDDIDAAEKVLEEWESRRLSYDFRVPNFLIDAYCR 372

Query: 148 SGLVEKAEKLMNVTIEKGEKPFLSSWDHLATGYVEANHLPKALKAMESA 2
            GL EKAE L+N  + KG  P + +W +LA GY+E + +PKA++A++ A
Sbjct: 373 KGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVEALKKA 421


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  237 bits (604), Expect = 2e-60
 Identities = 117/229 (51%), Positives = 160/229 (69%)
 Frame = -3

Query: 688 LYSKVGQYEKLDTLMEEMKENGVHPDKFTLSIRMSAYVANSDIEGLEKVLRSMEVDPNII 509
           LYS +G YEKLD L++EM+ENG+  D+ T  IR++A V +SDIEG+EK+L  MEVDPNI 
Sbjct: 184 LYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLNACVNSSDIEGMEKLLMKMEVDPNIS 243

Query: 508 VDWNCYVIAANGYIKVGLIDKALEILKKSEKLITWKQQRVAYVSLLTGYTRARSKEDLYR 329
           V ++ YVIAANGY+K GL+DK L +LK+SE+LI+   +R AY  LLT YT + +K ++YR
Sbjct: 244 VGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISGNTRRFAYEFLLTLYTASGNKAEVYR 303

Query: 328 IWKMYKSSVKLNSKAYICMIGSLLKLGDIAGAEKILEEWESGNNSYDFRVPNLLVVAYCK 149
           IW  YK   +  +  YICMI SLLKL DI GAE+I EEW+S    +D R+PN +V  Y +
Sbjct: 304 IWNKYKEIGRFFNSGYICMISSLLKLDDIDGAERIFEEWDSKKVLFDIRIPNSMVNVYSR 363

Query: 148 SGLVEKAEKLMNVTIEKGEKPFLSSWDHLATGYVEANHLPKALKAMESA 2
            G +EKAE  +N  +  GE+P  +SW+HLA GY  +  + KA++ +  A
Sbjct: 364 KGHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSGQMTKAVETIRKA 412


>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  233 bits (595), Expect = 2e-59
 Identities = 116/230 (50%), Positives = 169/230 (73%), Gaps = 1/230 (0%)
 Frame = -3

Query: 688 LYSKVGQYEKLDTLMEEMKENGVHPDKFTLSIRMSAYVANSDIEGLEKVLRSMEVDPNII 509
           LY ++G++E+LD+L++EMKE GV+ D+FT SIR+SAY A SD  G+EK++  ME +P+I+
Sbjct: 174 LYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIV 233

Query: 508 VDWNCYVIAANGYIKVGLIDKALEILKKSEKLI-TWKQQRVAYVSLLTGYTRARSKEDLY 332
           +DWNCYVIAAN Y KVGLIDK++ +LKKSE L+   K++  A+   L  Y R   K++++
Sbjct: 234 LDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIH 293

Query: 331 RIWKMYKSSVKLNSKAYICMIGSLLKLGDIAGAEKILEEWESGNNSYDFRVPNLLVVAYC 152
           RIW +YK   K+ +K +I MI SLL L DI GAE+I +EWE+   SYD R+PNLLV AYC
Sbjct: 294 RIWNLYKKE-KIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYC 352

Query: 151 KSGLVEKAEKLMNVTIEKGEKPFLSSWDHLATGYVEANHLPKALKAMESA 2
           ++GL+EKAE L+N  +    K  + SW +LA+GY++ + LP+A++ ++ A
Sbjct: 353 RAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLA 402