BLASTX nr result

ID: Coptis23_contig00021012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021012
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote...    82   5e-14
dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian...    73   2e-11
dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian...    73   2e-11
ref|XP_002320854.1| histone H3 [Populus trichocarpa] gi|22286162...    73   3e-11
ref|XP_004154492.1| PREDICTED: uncharacterized protein LOC101227...    72   5e-11

>ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis
           vinifera] gi|297745416|emb|CBI40496.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +1

Query: 1   AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126
           AEDYLVHLFEDAMLCAIHAKRVTLM+KDW+LARRIGG+ Q W
Sbjct: 115 AEDYLVHLFEDAMLCAIHAKRVTLMKKDWELARRIGGKGQPW 156


>dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744596|dbj|BAH03516.1| centromere specific histone
           H3 variant [Nicotiana sylvestris]
          Length = 157

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 40/42 (95%)
 Frame = +1

Query: 1   AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126
           AED+LVHLF+D+MLCAIHAKRVTLM+KD++LARR+GG+ + W
Sbjct: 116 AEDFLVHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 157


>dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744598|dbj|BAH03517.1| centromere specific histone
           H3 variant [Nicotiana tomentosiformis]
          Length = 156

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 40/42 (95%)
 Frame = +1

Query: 1   AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126
           AED+LVHLF+D+MLCAIHAKRVTLM+KD++LARR+GG+ + W
Sbjct: 115 AEDFLVHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 156


>ref|XP_002320854.1| histone H3 [Populus trichocarpa] gi|222861627|gb|EEE99169.1|
           histone H3 [Populus trichocarpa]
          Length = 129

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +1

Query: 1   AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126
           AED+LVHLFED MLCAIHAKRVTLM+KD++LARR+GG+ + W
Sbjct: 88  AEDFLVHLFEDGMLCAIHAKRVTLMKKDFELARRLGGKGRPW 129


>ref|XP_004154492.1| PREDICTED: uncharacterized protein LOC101227719 [Cucumis sativus]
          Length = 323

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = +1

Query: 1   AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126
           AED+LVHLFED MLCAIHAKRVT+M+KD++LARR+GG+ + W
Sbjct: 282 AEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 323


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