BLASTX nr result
ID: Coptis23_contig00021012
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021012 (376 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote... 82 5e-14 dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian... 73 2e-11 dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian... 73 2e-11 ref|XP_002320854.1| histone H3 [Populus trichocarpa] gi|22286162... 73 3e-11 ref|XP_004154492.1| PREDICTED: uncharacterized protein LOC101227... 72 5e-11 >ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis vinifera] gi|297745416|emb|CBI40496.3| unnamed protein product [Vitis vinifera] Length = 156 Score = 82.0 bits (201), Expect = 5e-14 Identities = 37/42 (88%), Positives = 40/42 (95%) Frame = +1 Query: 1 AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126 AEDYLVHLFEDAMLCAIHAKRVTLM+KDW+LARRIGG+ Q W Sbjct: 115 AEDYLVHLFEDAMLCAIHAKRVTLMKKDWELARRIGGKGQPW 156 >dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum] gi|218744596|dbj|BAH03516.1| centromere specific histone H3 variant [Nicotiana sylvestris] Length = 157 Score = 73.2 bits (178), Expect = 2e-11 Identities = 31/42 (73%), Positives = 40/42 (95%) Frame = +1 Query: 1 AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126 AED+LVHLF+D+MLCAIHAKRVTLM+KD++LARR+GG+ + W Sbjct: 116 AEDFLVHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 157 >dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum] gi|218744598|dbj|BAH03517.1| centromere specific histone H3 variant [Nicotiana tomentosiformis] Length = 156 Score = 73.2 bits (178), Expect = 2e-11 Identities = 31/42 (73%), Positives = 40/42 (95%) Frame = +1 Query: 1 AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126 AED+LVHLF+D+MLCAIHAKRVTLM+KD++LARR+GG+ + W Sbjct: 115 AEDFLVHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 156 >ref|XP_002320854.1| histone H3 [Populus trichocarpa] gi|222861627|gb|EEE99169.1| histone H3 [Populus trichocarpa] Length = 129 Score = 72.8 bits (177), Expect = 3e-11 Identities = 32/42 (76%), Positives = 39/42 (92%) Frame = +1 Query: 1 AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126 AED+LVHLFED MLCAIHAKRVTLM+KD++LARR+GG+ + W Sbjct: 88 AEDFLVHLFEDGMLCAIHAKRVTLMKKDFELARRLGGKGRPW 129 >ref|XP_004154492.1| PREDICTED: uncharacterized protein LOC101227719 [Cucumis sativus] Length = 323 Score = 72.0 bits (175), Expect = 5e-11 Identities = 31/42 (73%), Positives = 39/42 (92%) Frame = +1 Query: 1 AEDYLVHLFEDAMLCAIHAKRVTLMQKDWQLARRIGGRVQRW 126 AED+LVHLFED MLCAIHAKRVT+M+KD++LARR+GG+ + W Sbjct: 282 AEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 323