BLASTX nr result

ID: Coptis23_contig00021007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021007
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26899.3| unnamed protein product [Vitis vinifera]              237   8e-61
ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261...   228   5e-58
ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778...   224   6e-57
ref|XP_004164119.1| PREDICTED: uridine-cytidine kinase C-like [C...   221   5e-56
ref|XP_004140470.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   221   5e-56

>emb|CBI26899.3| unnamed protein product [Vitis vinifera]
          Length = 981

 Score =  237 bits (604), Expect = 8e-61
 Identities = 121/161 (75%), Positives = 135/161 (83%), Gaps = 2/161 (1%)
 Frame = +3

Query: 3   NYRDGVDDGNDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKS-TTGVVV 179
           NYRDGVDDGNDL+SIDFD LV NLEDL++GKD ++P+FDFQEKRRV S+ +KS ++GVV+
Sbjct: 95  NYRDGVDDGNDLNSIDFDALVSNLEDLIRGKDTLIPVFDFQEKRRVDSRAIKSASSGVVI 154

Query: 180 VDGTYALHSKLRSLLDIRVAVVGGVHFSLLSKVRYXXXXXXXXXXXXXXXFPLFRKHIEP 359
           VDGTYALHS+LRSLLDIRVAVVGGVHFSLLSKVRY               FPLFRKHIEP
Sbjct: 155 VDGTYALHSRLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEP 214

Query: 360 DLHHAQIRINNSFVSSFREPIYKLKCKSKSTN-VSTYSFHG 479
           DLHHAQIRINNSFVSSFRE IYKLKCKS++ N  S YSFHG
Sbjct: 215 DLHHAQIRINNSFVSSFREAIYKLKCKSETPNGHSAYSFHG 255



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
 Frame = +3

Query: 30  NDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKSTT--GVVVVDGTYALH 203
           +D  S+D   L +N++D+   +   +P+FD +   R G K L+ +   GVV+ +G YALH
Sbjct: 592 DDFSSLDLSLLSKNIDDVKNCRRTKVPIFDLETGARSGFKELEVSEDCGVVIFEGVYALH 651

Query: 204 SKLRSLLDIRVAVVGGVHFSLLSKV---RYXXXXXXXXXXXXXXXFPLFRKHIEPDLHHA 374
            ++R  LD+ +AVVGGVH  L+S+V   +                FP+F++HIEP L HA
Sbjct: 652 PEIRKSLDLWIAVVGGVHSHLISRVQRDKSRARSFMSQNEIMMTVFPMFQQHIEPHLVHA 711

Query: 375 QIRINNSF 398
            ++I N F
Sbjct: 712 HLKIRNDF 719


>ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261233 [Vitis vinifera]
          Length = 951

 Score =  228 bits (580), Expect = 5e-58
 Identities = 116/158 (73%), Positives = 133/158 (84%), Gaps = 1/158 (0%)
 Frame = +3

Query: 3   NYRDGVDDGNDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKS-TTGVVV 179
           NYRDGVDDGNDL+SIDFD LV NLEDL++GKD ++P+FDFQEKRRV S+ +KS ++GVV+
Sbjct: 95  NYRDGVDDGNDLNSIDFDALVSNLEDLIRGKDTLIPVFDFQEKRRVDSRAIKSASSGVVI 154

Query: 180 VDGTYALHSKLRSLLDIRVAVVGGVHFSLLSKVRYXXXXXXXXXXXXXXXFPLFRKHIEP 359
           VDGTYALHS+LRSLLDIRVAVVGGVHFSLLSKVRY               FPLFRKHIEP
Sbjct: 155 VDGTYALHSRLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEP 214

Query: 360 DLHHAQIRINNSFVSSFREPIYKLKCKSKSTNVSTYSF 473
           DLHHAQIRINNSFVSSFRE IYKLKCKS++ + + +SF
Sbjct: 215 DLHHAQIRINNSFVSSFREAIYKLKCKSENLHFA-FSF 251



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
 Frame = +3

Query: 30  NDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKSTT--GVVVVDGTYALH 203
           +D  S+D   L +N++D+   +   +P+FD +   R G K L+ +   GVV+ +G YALH
Sbjct: 565 DDFSSLDLSLLSKNIDDVKNCRRTKVPIFDLETGARSGFKELEVSEDCGVVIFEGVYALH 624

Query: 204 SKLRSLLDIRVAVVGGVHFSLLSKV---RYXXXXXXXXXXXXXXXFPLFRKHIEPDLHHA 374
            ++R  LD+ +AVVGGVH  L+S+V   +                FP+F++HIEP L HA
Sbjct: 625 PEIRKSLDLWIAVVGGVHSHLISRVQRDKSRARSFMSQNEIMMTVFPMFQQHIEPHLVHA 684

Query: 375 QIRINNSF 398
            ++I N F
Sbjct: 685 HLKIRNDF 692


>ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778905 [Glycine max]
          Length = 945

 Score =  224 bits (571), Expect = 6e-57
 Identities = 109/148 (73%), Positives = 123/148 (83%)
 Frame = +3

Query: 3   NYRDGVDDGNDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKSTTGVVVV 182
           NYRDGVD+GND+DSIDFDTL++NLEDL KG D  +P FD+Q+KRRVG K +KS + VV+V
Sbjct: 95  NYRDGVDEGNDVDSIDFDTLIKNLEDLTKGNDTSIPEFDYQQKRRVGYKAIKSPSSVVIV 154

Query: 183 DGTYALHSKLRSLLDIRVAVVGGVHFSLLSKVRYXXXXXXXXXXXXXXXFPLFRKHIEPD 362
           DGTYALH+KLRSLLDIRVAVVGGVHFSLLSKVRY               FPLFRKHIEPD
Sbjct: 155 DGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPD 214

Query: 363 LHHAQIRINNSFVSSFREPIYKLKCKSK 446
           LHHAQIRINNSFVSSFRE +YK+KC+SK
Sbjct: 215 LHHAQIRINNSFVSSFREAVYKVKCRSK 242



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
 Frame = +3

Query: 30  NDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKSTT--GVVVVDGTYALH 203
           +D  ++D   L +N++D+  G+   +P+FD +   R G K L+ +   GV++ +G YALH
Sbjct: 558 DDFSALDLSLLSKNIDDIRNGQRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGIYALH 617

Query: 204 SKLRSLLDIRVAVVGGVHFSLLSKV---RYXXXXXXXXXXXXXXXFPLFRKHIEPDLHHA 374
             +R  LD+ +AVVGGVH  L+S+V   +                FP+F++ IEP L HA
Sbjct: 618 PDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHA 677

Query: 375 QIRINNSF--VSSFREPIYKLKCKSK 446
            ++I N F  V S    ++ LK   K
Sbjct: 678 HLKIRNDFDPVLSPESSLFVLKSNKK 703


>ref|XP_004164119.1| PREDICTED: uridine-cytidine kinase C-like [Cucumis sativus]
          Length = 407

 Score =  221 bits (563), Expect = 5e-56
 Identities = 112/161 (69%), Positives = 132/161 (81%), Gaps = 2/161 (1%)
 Frame = +3

Query: 3   NYRDGVDDGNDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKS-TTGVVV 179
           NYRDGVD+GNDLDSIDFD LV+NLEDL  G+D ++P+FDF  K+RV SKI+KS ++GVV+
Sbjct: 94  NYRDGVDEGNDLDSIDFDLLVQNLEDLTNGRDTMIPVFDFHLKKRVSSKIIKSASSGVVI 153

Query: 180 VDGTYALHSKLRSLLDIRVAVVGGVHFSLLSKVRYXXXXXXXXXXXXXXXFPLFRKHIEP 359
           +DGTYALH+KLRSLLDIRVAVVGGVHF+LLSKVR+               FPLFRKHIEP
Sbjct: 154 IDGTYALHAKLRSLLDIRVAVVGGVHFNLLSKVRHDIGDSCSLDYLIDSIFPLFRKHIEP 213

Query: 360 DLHHAQIRINNSFVSSFREPIYKLKCKSKSTNV-STYSFHG 479
           DLHHAQIRINNSFVSSFRE IYKLKC+S+  +V S ++F G
Sbjct: 214 DLHHAQIRINNSFVSSFREAIYKLKCRSEFPDVDSAHAFQG 254


>ref|XP_004140470.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101220584 [Cucumis sativus]
          Length = 955

 Score =  221 bits (563), Expect = 5e-56
 Identities = 112/161 (69%), Positives = 132/161 (81%), Gaps = 2/161 (1%)
 Frame = +3

Query: 3   NYRDGVDDGNDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKS-TTGVVV 179
           NYRDGVD+GNDLDSIDFD LV+NLEDL  G+D ++P+FDF  K+RV SKI+KS ++GVV+
Sbjct: 94  NYRDGVDEGNDLDSIDFDLLVQNLEDLTNGRDTMIPVFDFHLKKRVSSKIIKSASSGVVI 153

Query: 180 VDGTYALHSKLRSLLDIRVAVVGGVHFSLLSKVRYXXXXXXXXXXXXXXXFPLFRKHIEP 359
           +DGTYALH+KLRSLLDIRVAVVGGVHF+LLSKVR+               FPLFRKHIEP
Sbjct: 154 IDGTYALHAKLRSLLDIRVAVVGGVHFNLLSKVRHDIGDSCSLDYLIDSIFPLFRKHIEP 213

Query: 360 DLHHAQIRINNSFVSSFREPIYKLKCKSKSTNV-STYSFHG 479
           DLHHAQIRINNSFVSSFRE IYKLKC+S+  +V S ++F G
Sbjct: 214 DLHHAQIRINNSFVSSFREAIYKLKCRSEFPDVDSAHAFQG 254



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
 Frame = +3

Query: 30  NDLDSIDFDTLVRNLEDLMKGKDAVMPLFDFQEKRRVGSKILKSTT--GVVVVDGTYALH 203
           +D  ++D   L +N++D+  G+   +PLFD +   R G K L+ +   GV++ +G YALH
Sbjct: 568 DDFSTLDLSLLSKNIDDMRNGRRTKVPLFDLETGARSGFKELEVSEDCGVIIFEGVYALH 627

Query: 204 SKLRSLLDIRVAVVGGVHFSLLSKV---RYXXXXXXXXXXXXXXXFPLFRKHIEPDLHHA 374
             +R  LD+ +AVVGGVH  L+S+V   +                FP+F++HIEP L HA
Sbjct: 628 PDIRKSLDLWIAVVGGVHSHLISRVQRDKCKAGCFMSQNDIMMTVFPMFQQHIEPHLVHA 687

Query: 375 QIRINNSF 398
            ++I N F
Sbjct: 688 HLKIRNDF 695


Top