BLASTX nr result

ID: Coptis23_contig00021006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021006
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27315.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268...    73   2e-11
ref|XP_002272146.2| PREDICTED: uncharacterized protein LOC100260...    70   2e-10
emb|CBI39310.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>emb|CBI27315.3| unnamed protein product [Vitis vinifera]
          Length = 1177

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/84 (50%), Positives = 50/84 (59%)
 Frame = +1

Query: 1    IKGIMAATEQCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSIAMSADGSA 180
            I  IMAAT+  FS   EN   L   GE IAVWLL+S   DS+ Q+D+Q N    +     
Sbjct: 1026 INKIMAATKMWFSKHNENYTFLPLGGESIAVWLLVSTLSDSDTQHDNQMNDCQTNP---- 1081

Query: 181  LDGSWRLAFLVDNIVVSGSALDPR 252
              G WRLA LV N+V+ GSALDPR
Sbjct: 1082 -VGWWRLALLVKNMVILGSALDPR 1104


>ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268093 [Vitis vinifera]
          Length = 1242

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/84 (50%), Positives = 50/84 (59%)
 Frame = +1

Query: 1    IKGIMAATEQCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSIAMSADGSA 180
            I  IMAAT+  FS   EN   L   GE IAVWLL+S   DS+ Q+D+Q N    +     
Sbjct: 1091 INKIMAATKMWFSKHNENYTFLPLGGESIAVWLLVSTLSDSDTQHDNQMNDCQTNP---- 1146

Query: 181  LDGSWRLAFLVDNIVVSGSALDPR 252
              G WRLA LV N+V+ GSALDPR
Sbjct: 1147 -VGWWRLALLVKNMVILGSALDPR 1169


>ref|XP_002272146.2| PREDICTED: uncharacterized protein LOC100260013 [Vitis vinifera]
          Length = 175

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/93 (44%), Positives = 52/93 (55%)
 Frame = +1

Query: 1   IKGIMAATEQCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSIAMSADGSA 180
           I  IMAAT+  FS   EN   L   GE IAVWLL++   DS+ Q+D+Q N    +     
Sbjct: 55  INKIMAATKMWFSKHNENYTFLPLGGESIAVWLLVATLSDSDTQHDNQMNDCQTNP---- 110

Query: 181 LDGSWRLAFLVDNIVVSGSALDPRFKIMNLSGN 279
             G WRLA LV N+V+ GSAL PR   +  S +
Sbjct: 111 -VGWWRLALLVKNMVILGSALGPRAAAIGASAS 142


>emb|CBI39310.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/93 (43%), Positives = 52/93 (55%)
 Frame = +1

Query: 1   IKGIMAATEQCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSIAMSADGSA 180
           I  IMAAT+  FS   EN   L   GE I+VWLL++   DS+ Q+D+Q N    +     
Sbjct: 33  INKIMAATKMWFSKNNENYTFLPLGGESISVWLLVATLSDSDTQHDNQMNDCQTNP---- 88

Query: 181 LDGSWRLAFLVDNIVVSGSALDPRFKIMNLSGN 279
             G WR A LV N+V+ GSALDPR   +  S +
Sbjct: 89  -VGWWRPALLVKNMVILGSALDPRAAAIGASAS 120


>ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|222852110|gb|EEE89657.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = +1

Query: 1    IKGIMAATEQCFSGVCENLDILSFNGEDIAVWLLISAACDSEDQYDHQENSIAMSAD-GS 177
            I GI+ AT+  FS   E   +   +GEDIA+WLL+S   + + Q D+      +S+D G 
Sbjct: 1162 IDGIVDATKLWFSENSEYYSLPPLDGEDIAIWLLVSTIPELDTQEDY------ISSDCGI 1215

Query: 178  ALDGSWRLAFLVDNIVVSGSALDPR-FKIMNLSGN 279
               G WRLA LV N+++ G ALDPR   I + SGN
Sbjct: 1216 NPVGWWRLALLVKNMLILGKALDPRAAAIGSSSGN 1250


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