BLASTX nr result

ID: Coptis23_contig00021004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021004
         (1519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   1e-09
gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indi...    70   1e-09
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    70   2e-09
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   2e-08
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    64   1e-07

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 36/108 (33%), Positives = 53/108 (49%)
 Frame = -3

Query: 332 MSLFSWNCQGFGHPSTGEDLLKKIRKYRPEMILLVETQVKSPKISQKIQRQGFVHHFHVS 153
           M++  WNC+G G+P T   L K    Y P+++ L ET +   +      R GF + F VS
Sbjct: 1   MNILCWNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVS 60

Query: 152 SNGRSGGMSLLWTNTLSIHIEKFEHWMIHGTTQCLSSTAAKWTFTAVH 9
           S GR+GG+ + W   LS  +  F    I G    +   A KW F  ++
Sbjct: 61  SRGRAGGLCVFWREELSFSLVSFSQHHICGD---IDDGAKKWRFVGIY 105


>gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indica Group]
          Length = 1477

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 32/108 (29%), Positives = 55/108 (50%)
 Frame = -3

Query: 353 RKQPPLTMSLFSWNCQGFGHPSTGEDLLKKIRKYRPEMILLVETQVKSPKISQKIQRQGF 174
           R+ PP TM+  +WNC+G G P T  +L++ +R Y P ++ L  T+    ++     R G 
Sbjct: 440 RRAPPGTMNALAWNCRGLGRPCTVHELVRLVRMYSPRLVFLSATRQDQERVQGLRWRLGL 499

Query: 173 VHHFHVSSNGRSGGMSLLWTNTLSIHIEKFEHWMIHGTTQCLSSTAAK 30
            +   +   G  GG++L+W  TLS+H+      +    +Q +    AK
Sbjct: 500 KNCLALKGEGSGGGVALIWDETLSVHLLSMSCRVFGSVSQEIKEIKAK 547


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 29/88 (32%), Positives = 52/88 (59%)
 Frame = -3

Query: 332 MSLFSWNCQGFGHPSTGEDLLKKIRKYRPEMILLVETQVKSPKISQKIQRQGFVHHFHVS 153
           M    WNC+G G+P+T ++L    + Y P ++ ++ETQ+   ++        F + F V+
Sbjct: 1   MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVN 60

Query: 152 SNGRSGGMSLLWTNTLSIHIEKFEHWMI 69
           S+GRSGG+ L W N + + I+K+ ++ I
Sbjct: 61  SSGRSGGLGLFWNNDVLLSIQKYSNYHI 88


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 332 MSLFSWNCQGFGHPSTGEDLLKKIRKYRPEMILLVETQVKSPKISQKIQRQGFVHHFHVS 153
           M L SWNCQG  +P T   L     + RP ++ ++ET V S  + +  +R GF++   +S
Sbjct: 1   MKLLSWNCQGLANPWTVNALHSLCWRDRPNIVFVMETMVDSQVLEKIRKRCGFMNGLCLS 60

Query: 152 SNGRSGGMSLLWTNTLSIHIEKFEHWMIH 66
           SNG SGGM  LW N + + +E F    IH
Sbjct: 61  SNGNSGGMG-LWWNEMDVTVESFSAHHIH 88


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 34/108 (31%), Positives = 59/108 (54%)
 Frame = -3

Query: 332 MSLFSWNCQGFGHPSTGEDLLKKIRKYRPEMILLVETQVKSPKISQKIQRQGFVHHFHVS 153
           MS  +WNC+G G+ +T +DL   I+K   +++ L ET+    K+S+  ++  F     VS
Sbjct: 636 MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVS 695

Query: 152 SNGRSGGMSLLWTNTLSIHIEKFEHWMIHGTTQCLSSTAAKWTFTAVH 9
           S G+SGG++L W  ++S+ ++      I    + LS    +W  T V+
Sbjct: 696 SEGKSGGLALYWDESVSVDVKDINKRYIDAYVR-LSPDEPQWHITFVY 742


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