BLASTX nr result

ID: Coptis23_contig00020480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020480
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635366.1| PREDICTED: uncharacterized protein LOC100266...    66   3e-09
emb|CBI38447.3| unnamed protein product [Vitis vinifera]               66   3e-09
emb|CAN61653.1| hypothetical protein VITISV_006013 [Vitis vinifera]    62   4e-08
ref|NP_567279.3| uncharacterized protein [Arabidopsis thaliana] ...    62   5e-08
ref|XP_002874826.1| hypothetical protein ARALYDRAFT_490143 [Arab...    62   5e-08

>ref|XP_003635366.1| PREDICTED: uncharacterized protein LOC100266951 [Vitis vinifera]
          Length = 1206

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/48 (68%), Positives = 36/48 (75%)
 Frame = -1

Query: 284  QVLTRFEDFPNKKLEMLRTAAALYSKLDVILTNLTTLKIETPIGSLLD 141
            QVL RFE FP KKLE LRTAAALY KLD I+TNL   K+  P+G LLD
Sbjct: 1060 QVLARFEGFPTKKLETLRTAAALYLKLDAIVTNLKIWKVVAPLGQLLD 1107



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/48 (64%), Positives = 33/48 (68%)
 Frame = -1

Query: 284 QVLTRFEDFPNKKLEMLRTAAALYSKLDVILTNLTTLKIETPIGSLLD 141
           QVL RFE FP KKLE LR AAALY KLD I+ NL   K   P+G LLD
Sbjct: 603 QVLARFEGFPTKKLEALRMAAALYLKLDAIVANLQNWKPVAPLGQLLD 650


>emb|CBI38447.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/48 (68%), Positives = 36/48 (75%)
 Frame = -1

Query: 284 QVLTRFEDFPNKKLEMLRTAAALYSKLDVILTNLTTLKIETPIGSLLD 141
           QVL RFE FP KKLE LRTAAALY KLD I+TNL   K+  P+G LLD
Sbjct: 158 QVLARFEGFPTKKLETLRTAAALYLKLDAIVTNLKIWKVVAPLGQLLD 205


>emb|CAN61653.1| hypothetical protein VITISV_006013 [Vitis vinifera]
          Length = 341

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/48 (68%), Positives = 36/48 (75%)
 Frame = -1

Query: 284 QVLTRFEDFPNKKLEMLRTAAALYSKLDVILTNLTTLKIETPIGSLLD 141
           QVL RFE FP KKLE LRTAAALY KLD I+TNL   K+  P+G LLD
Sbjct: 218 QVLARFEGFPTKKLETLRTAAALYLKLDAIVTNLKIWKV-APLGQLLD 264


>ref|NP_567279.3| uncharacterized protein [Arabidopsis thaliana]
           gi|332657053|gb|AEE82453.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 880

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/48 (64%), Positives = 34/48 (70%)
 Frame = -1

Query: 284 QVLTRFEDFPNKKLEMLRTAAALYSKLDVILTNLTTLKIETPIGSLLD 141
           QVL RFE FP KKLE++RTA ALY KLD IL  L   KIE P+  LLD
Sbjct: 704 QVLARFEGFPEKKLEVIRTAGALYKKLDGILVELKNWKIEPPLNDLLD 751


>ref|XP_002874826.1| hypothetical protein ARALYDRAFT_490143 [Arabidopsis lyrata subsp.
           lyrata] gi|297320663|gb|EFH51085.1| hypothetical protein
           ARALYDRAFT_490143 [Arabidopsis lyrata subsp. lyrata]
          Length = 646

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/48 (64%), Positives = 34/48 (70%)
 Frame = -1

Query: 284 QVLTRFEDFPNKKLEMLRTAAALYSKLDVILTNLTTLKIETPIGSLLD 141
           QVL RFE FP KKLE++RTA ALY KLD IL  L   KIE P+  LLD
Sbjct: 467 QVLARFEGFPEKKLEVIRTAGALYKKLDGILVELKNWKIEPPLNDLLD 514


Top