BLASTX nr result

ID: Coptis23_contig00020476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020476
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB39248.1| NADP-isocitrate dehydrogenase [Eucalyptus globulus]     69   3e-10
gb|AAD51361.1|AF176669_1 NADP-isocitrate dehydrogenase [Citrus l...    69   5e-10
ref|NP_001056381.1| Os05g0573200 [Oryza sativa Japonica Group] g...    69   5e-10
dbj|BAA34112.1| NADP specific isocitrate dehydrogenase [Daucus c...    69   5e-10
ref|NP_001140324.1| isocitrate dehydrogenase2 [Zea mays] gi|1946...    69   5e-10

>gb|AAB39248.1| NADP-isocitrate dehydrogenase [Eucalyptus globulus]
          Length = 416

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +3

Query: 120 MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFP 224
           MG +KIKV NPIVEMDGDEMTRVFWKSIKDKLIFP
Sbjct: 1   MGFEKIKVENPIVEMDGDEMTRVFWKSIKDKLIFP 35


>gb|AAD51361.1|AF176669_1 NADP-isocitrate dehydrogenase [Citrus limon]
          Length = 414

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = +3

Query: 120 MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFP 224
           M  QKIKV NPIVEMDGDEMTRVFWKSIKDKLIFP
Sbjct: 1   MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFP 35


>ref|NP_001056381.1| Os05g0573200 [Oryza sativa Japonica Group]
           gi|5007086|gb|AAD37810.1|AF155334_1 NADP-specific
           isocitrate dehydrogenase [Oryza sativa]
           gi|52353538|gb|AAU44104.1| isocitrate dehydrogenase
           [Oryza sativa Japonica Group]
           gi|113579932|dbj|BAF18295.1| Os05g0573200 [Oryza sativa
           Japonica Group] gi|222632636|gb|EEE64768.1| hypothetical
           protein OsJ_19624 [Oryza sativa Japonica Group]
          Length = 412

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = +3

Query: 120 MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFP 224
           M S KIKV NPIVEMDGDEMTRVFWKSIKDKLIFP
Sbjct: 1   MASTKIKVANPIVEMDGDEMTRVFWKSIKDKLIFP 35


>dbj|BAA34112.1| NADP specific isocitrate dehydrogenase [Daucus carota]
          Length = 412

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = +3

Query: 120 MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFP 224
           M  QKIKV NPIVEMDGDEMTRVFWKSIKDKLIFP
Sbjct: 1   MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFP 35


>ref|NP_001140324.1| isocitrate dehydrogenase2 [Zea mays] gi|194699012|gb|ACF83590.1|
           unknown [Zea mays]
          Length = 415

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = +3

Query: 120 MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFP 224
           M   KIKVTNPIVEMDGDEMTRVFWKSIKDKLIFP
Sbjct: 1   MAFNKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFP 35


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